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Protein
Submitted name:

ATP dependent DNA ligase

Gene

Celal_1881

Organism
Cellulophaga algicola (strain DSM 14237 / IC166 / ACAM 630)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA binding Source: InterPro
  3. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciCALG688270:GHJ1-1905-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:Celal_1881Imported
OrganismiCellulophaga algicola (strain DSM 14237 / IC166 / ACAM 630)Imported
Taxonomic identifieri688270 [NCBI]
Taxonomic lineageiBacteriaBacteroidetesFlavobacteriiaFlavobacterialesFlavobacteriaceaeCellulophaga
ProteomesiUP000008634: Chromosome

Structurei

3D structure databases

ProteinModelPortaliE6XEA0.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000036007.
KOiK01971.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMiSSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

E6XEA0-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MKNFASLIKT LDSTTKTNTK VAALAAYFAK ASDTDKVWTI AILSHRRPPR
60 70 80 90 100
PVNTTLLRLW ASELSNIPLW LFEESYHIVG DLAETIALVL PEPPKQTDKT
110 120 130 140 150
LTQFLEEMIL LKKKTEEDKK AYLYENWKVL DYYERFVFTK LITGGFRIGV
160 170 180 190 200
SQKLMTKALS KATEINEDIL AYKLMGNWDP NSITFQELIL EENENDYLSK
210 220 230 240 250
PYPFYLAYAI ENDVSDLGDV QQWSAEHKWD GIRSQTIFRN DELFVWSRGE
260 270 280 290 300
ELVTDKYPEF EALVGNIPNG TVIDAEILPY ANNTIGTFND LQTRIGRKNI
310 320 330 340 350
TKSLLNKTPV ILKAYDILEW RGKDIRQLPF IERREILEKL ITTISSSGLD
360 370 380 390 400
VPLQLSATIH FNSWEEVTKE RTRAREMRSE GLMLKRKDSP YLVGRKKGDW
410 420 430 440 450
WKWKVAPLTI DAVLTYAMRG HGRRSNLFTD YTFALWNTKE DGEKELVTFA
460 470 480 490 500
KAYSGLTDAE FRKVDAWIKK NTLERFGPVR SVTPHHVFEI AFEGIAISKR
510 520 530 540
HKSGIATRFP RIIRWRHDKK IEDANTLEDL KGLIPVAIQE TKN
Length:543
Mass (Da):62,752
Last modified:March 8, 2011 - v1
Checksum:i85548C3F6E5219F5
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002453 Genomic DNA. Translation: ADV49181.1.
RefSeqiYP_004164679.1. NC_014934.1.

Genome annotation databases

EnsemblBacteriaiADV49181; ADV49181; Celal_1881.
GeneIDi10144276.
KEGGicao:Celal_1881.
PATRICi46909254. VBICelAlg158510_1902.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002453 Genomic DNA. Translation: ADV49181.1.
RefSeqiYP_004164679.1. NC_014934.1.

3D structure databases

ProteinModelPortaliE6XEA0.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADV49181; ADV49181; Celal_1881.
GeneIDi10144276.
KEGGicao:Celal_1881.
PATRICi46909254. VBICelAlg158510_1902.

Phylogenomic databases

HOGENOMiHOG000036007.
KOiK01971.

Enzyme and pathway databases

BioCyciCALG688270:GHJ1-1905-MONOMER.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMiSSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 14237 / IC166 / ACAM 630Imported.

Entry informationi

Entry nameiE6XEA0_CELAD
AccessioniPrimary (citable) accession number: E6XEA0
Entry historyi
Integrated into UniProtKB/TrEMBL: March 8, 2011
Last sequence update: March 8, 2011
Last modified: February 4, 2015
This is version 22 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.