E6XEA0 (E6XEA0_CELAD) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
ATP dependent DNA ligase EMBL ADV49181.1

Gene names

Ordered Locus Names:

Celal_1881

Organism

Cellulophaga algicola (strain DSM 14237 / IC166 / ACAM 630) [Complete proteome] [HAMAP] EMBL ADV49181.1

Taxonomic identifier

688270 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Bacteroidetes/Chlorobi group › Bacteroidetes › Flavobacteriia › Flavobacteriales › Flavobacteriaceae › Cellulophaga › Cellulophaga algicola

Protein attributes

Sequence length	543 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Ligase EMBL ADV49181.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	DNA recombination Inferred from electronic annotation. Source: InterPro DNA repair Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: InterPro DNA binding Inferred from electronic annotation. Source: InterPro DNA ligase (ATP) activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	E6XEA0 [UniParc]. Last modified March 8, 2011. Version 1. Checksum: 85548C3F6E5219F5	FASTA	543	62,752
	10 20 30 40 50 60 MKNFASLIKT LDSTTKTNTK VAALAAYFAK ASDTDKVWTI AILSHRRPPR PVNTTLLRLW 70 80 90 100 110 120 ASELSNIPLW LFEESYHIVG DLAETIALVL PEPPKQTDKT LTQFLEEMIL LKKKTEEDKK 130 140 150 160 170 180 AYLYENWKVL DYYERFVFTK LITGGFRIGV SQKLMTKALS KATEINEDIL AYKLMGNWDP 190 200 210 220 230 240 NSITFQELIL EENENDYLSK PYPFYLAYAI ENDVSDLGDV QQWSAEHKWD GIRSQTIFRN 250 260 270 280 290 300 DELFVWSRGE ELVTDKYPEF EALVGNIPNG TVIDAEILPY ANNTIGTFND LQTRIGRKNI 310 320 330 340 350 360 TKSLLNKTPV ILKAYDILEW RGKDIRQLPF IERREILEKL ITTISSSGLD VPLQLSATIH 370 380 390 400 410 420 FNSWEEVTKE RTRAREMRSE GLMLKRKDSP YLVGRKKGDW WKWKVAPLTI DAVLTYAMRG 430 440 450 460 470 480 HGRRSNLFTD YTFALWNTKE DGEKELVTFA KAYSGLTDAE FRKVDAWIKK NTLERFGPVR 490 500 510 520 530 540 SVTPHHVFEI AFEGIAISKR HKSGIATRFP RIIRWRHDKK IEDANTLEDL KGLIPVAIQE TKN

References

[1]

"Complete genome sequence of Cellulophaga algicola type strain (IC166)." Abt B., Lu M., Misra M., Han C., Nolan M., Lucas S., Hammon N., Deshpande S., Cheng J., Tapia R., Goodwin L., Pitluck S., Liolios K., Pagani I., Ivanova N., Mavromatis K., Ovchinnikova G., Pati A. , Chen A., Palaniappan K., Land M., Hauser L., Chang Y., Jeffries C., Detter J., Brambilla E., Rohde M., Tindall B., Goker M., Woyke T., Bristow J., Eisen J., Markowitz V., Hugenholtz P., Kyrpides N., Klenk H., Lapidus A. Stand. Genomic Sci. 4:72-80(2010) Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DSM 14237 / IC166 / ACAM 630.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002453 Genomic DNA. Translation: ADV49181.1.
RefSeq	YP_004164679.1. NC_014934.1.
3D structure databases
ProteinModelPortal	E6XEA0.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ADV49181; ADV49181; Celal_1881.
GeneID	10144276.
KEGG	cao:Celal_1881.
PATRIC	46909254. VBICelAlg158510_1902.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000036007.
KO	K01971.
Enzyme and pathway databases
BioCyc	CALG688270:GHJ1-1905-MONOMER.
Family and domain databases
Gene3D	2.40.50.140. 1 hit.
InterPro	IPR026333. ATP_dep_DNA_lig_pp_1105_fam. IPR012309. DNA_ligase_ATP-dep_C. IPR012310. DNA_ligase_ATP-dep_cent. IPR012308. DNA_ligase_ATP-dep_N. IPR012340. NA-bd_OB-fold. [Graphical view]
Pfam	PF04679. DNA_ligase_A_C. 1 hit. PF01068. DNA_ligase_A_M. 1 hit. PF04675. DNA_ligase_A_N. 1 hit. [Graphical view]
SUPFAM	SSF50249. Nucleic_acid_OB. 1 hit.
TIGRFAMs	TIGR04120. DNA_lig_bact. 1 hit.
PROSITE	PS50160. DNA_LIGASE_A3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

E6XEA0_CELAD

Accession

Primary (citable) accession number: E6XEA0

Entry history

Integrated into UniProtKB/TrEMBL:	March 8, 2011
Last sequence update:	March 8, 2011
Last modified:	May 1, 2013
This is version 15 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)