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Protein
Submitted name:

ATP dependent DNA ligase

Gene

Psesu_1057

Organism
Pseudoxanthomonas suwonensis (strain 11-1)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciPSUW743721:GH68-1069-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:Psesu_1057Imported
OrganismiPseudoxanthomonas suwonensis (strain 11-1)Imported
Taxonomic identifieri743721 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaXanthomonadalesXanthomonadaceaePseudoxanthomonas
ProteomesiUP000008632 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2525 PotentialImportedAdd
BLAST
Chaini26 – 287262 PotentialImportedPRO_5000677736Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi743721.Psesu_1057.

Structurei

3D structure databases

ProteinModelPortaliE6WRV8.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

SignalImported

Phylogenomic databases

HOGENOMiHOG000293070.
KOiK10747.
OMAiVRGYWDG.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR029319. DNA_ligase_OB.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
PF14743. DNA_ligase_OB_2. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

E6WRV8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRFLLLALLC LLPASVLPAV PPTTAPAPAP MLASTWRGGL AVDAFLVSEK
60 70 80 90 100
LDGVRARWDG RRLWTRGGAP IVPPAGFTRG WPSQPMDGEL WAGRGRFEEV
110 120 130 140 150
SALVRRSSGD ARDWDSVRFM LFDLPAHPGS FARRVQYMRE LVAKARSPTL
160 170 180 190 200
AMIEQRRIAT TAALDAELAR VVAAGGEGLM LHRADALYRP GRSDALFKYK
210 220 230 240 250
PHADAEAQVV AHLPGKGRLE GRLGALQVRT PDGRSFRIGS GFSDAQRADP
260 270 280
PPIGSWVTYR YSGLTSKGLP RFPRFLRIRH ELPPADP
Length:287
Mass (Da):31,431
Last modified:March 8, 2011 - v1
Checksum:i64AF31C7FFD2D591
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002446 Genomic DNA. Translation: ADV26907.1.
RefSeqiWP_013534737.1. NC_014924.1.
YP_004146138.1. NC_014924.1.

Genome annotation databases

EnsemblBacteriaiADV26907; ADV26907; Psesu_1057.
KEGGipsu:Psesu_1057.
PATRICi45335936. VBIPseSuw172708_1091.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002446 Genomic DNA. Translation: ADV26907.1.
RefSeqiWP_013534737.1. NC_014924.1.
YP_004146138.1. NC_014924.1.

3D structure databases

ProteinModelPortaliE6WRV8.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi743721.Psesu_1057.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADV26907; ADV26907; Psesu_1057.
KEGGipsu:Psesu_1057.
PATRICi45335936. VBIPseSuw172708_1091.

Phylogenomic databases

HOGENOMiHOG000293070.
KOiK10747.
OMAiVRGYWDG.

Enzyme and pathway databases

BioCyciPSUW743721:GH68-1069-MONOMER.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR029319. DNA_ligase_OB.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
PF14743. DNA_ligase_OB_2. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 11-1Imported.

Entry informationi

Entry nameiE6WRV8_PSEUU
AccessioniPrimary (citable) accession number: E6WRV8
Entry historyi
Integrated into UniProtKB/TrEMBL: March 8, 2011
Last sequence update: March 8, 2011
Last modified: June 24, 2015
This is version 28 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.