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E6WDI1

- E6WDI1_PANSA

UniProt

E6WDI1 - E6WDI1_PANSA

Protein

Superoxide dismutase [Cu-Zn]

Gene

Pat9b_1690

Organism
Pantoea sp. (strain At-9b)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 25 (01 Oct 2014)
      Sequence version 1 (08 Mar 2011)
      Previous versions | rss
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    Functioni

    Destroys radicals which are normally produced within the cells and which are toxic to biological systems.UniRule annotation

    Catalytic activityi

    2 superoxide + 2 H+ = O2 + H2O2.UniRule annotation

    Cofactori

    Binds 1 copper ion per subunit.UniRule annotation
    Binds 1 zinc ion per subunit.UniRule annotation

    GO - Molecular functioni

    1. metal ion binding Source: UniProtKB-KW
    2. superoxide dismutase activity Source: UniProtKB-EC

    Keywords - Molecular functioni

    OxidoreductaseUniRule annotation

    Keywords - Ligandi

    CopperUniRule annotation, Metal-bindingUniRule annotation, ZincUniRule annotation

    Enzyme and pathway databases

    BioCyciPSP592316:GI0L-1744-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Superoxide dismutase [Cu-Zn]UniRule annotation (EC:1.15.1.1UniRule annotation)
    Gene namesi
    Ordered Locus Names:Pat9b_1690Imported
    OrganismiPantoea sp. (strain At-9b)Imported
    Taxonomic identifieri592316 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaePantoea
    ProteomesiUP000001624: Chromosome

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Signal peptidei1 – 2020 PotentialImportedAdd
    BLAST
    Chaini21 – 172152 PotentialImportedPRO_5000677002Add
    BLAST

    Structurei

    3D structure databases

    ProteinModelPortaliE6WDI1.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the Cu-Zn superoxide dismutase family.UniRule annotation

    Keywords - Domaini

    SignalImported

    Phylogenomic databases

    HOGENOMiHOG000263449.
    KOiK04565.
    OMAiDHPKPLG.

    Family and domain databases

    Gene3Di2.60.40.200. 1 hit.
    InterProiIPR018152. SOD_Cu/Zn_BS.
    IPR001424. SOD_Cu_Zn_dom.
    [Graphical view]
    PfamiPF00080. Sod_Cu. 1 hit.
    [Graphical view]
    SUPFAMiSSF49329. SSF49329. 1 hit.
    PROSITEiPS00087. SOD_CU_ZN_1. 1 hit.
    PS00332. SOD_CU_ZN_2. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    E6WDI1-1 [UniParc]FASTAAdd to Basket

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    MNRILIAVLA LFCSGVAQAA SEQVTLHKVT EQGIGAAIGK VTISETPWGL    50
    QFTPELSGLP PGIHGFHVHA KGSCEPGESG GKMVAAGAAG GHLDPANTGK 100
    HLGPYANGHL GDLPALFVTD EGKADYPVLA PRIKSLSEIK GKALMVHMGG 150
    DNHADHPQPL GGGGARFACG VI 172
    Length:172
    Mass (Da):17,494
    Last modified:March 8, 2011 - v1
    Checksum:i9D169D1C87E19E8C
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002433 Genomic DNA. Translation: ADU69006.1.
    RefSeqiWP_013508863.1. NC_014837.1.
    YP_004115562.1. NC_014837.1.

    Genome annotation databases

    EnsemblBacteriaiADU69006; ADU69006; Pat9b_1690.
    GeneIDi10069123.
    KEGGipao:Pat9b_1690.
    PATRICi45317744. VBIPanSp129740_1693.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002433 Genomic DNA. Translation: ADU69006.1 .
    RefSeqi WP_013508863.1. NC_014837.1.
    YP_004115562.1. NC_014837.1.

    3D structure databases

    ProteinModelPortali E6WDI1.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ADU69006 ; ADU69006 ; Pat9b_1690 .
    GeneIDi 10069123.
    KEGGi pao:Pat9b_1690.
    PATRICi 45317744. VBIPanSp129740_1693.

    Phylogenomic databases

    HOGENOMi HOG000263449.
    KOi K04565.
    OMAi DHPKPLG.

    Enzyme and pathway databases

    BioCyci PSP592316:GI0L-1744-MONOMER.

    Family and domain databases

    Gene3Di 2.60.40.200. 1 hit.
    InterProi IPR018152. SOD_Cu/Zn_BS.
    IPR001424. SOD_Cu_Zn_dom.
    [Graphical view ]
    Pfami PF00080. Sod_Cu. 1 hit.
    [Graphical view ]
    SUPFAMi SSF49329. SSF49329. 1 hit.
    PROSITEi PS00087. SOD_CU_ZN_1. 1 hit.
    PS00332. SOD_CU_ZN_2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Complete sequence chromosome of Pantoea sp. At-9b."
      US DOE Joint Genome Institute
      Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Davenport K., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Ovchinnikova G., Pinto A., Currie C., Woyke T.
      Submitted (DEC-2010) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: At-9bImported.

    Entry informationi

    Entry nameiE6WDI1_PANSA
    AccessioniPrimary (citable) accession number: E6WDI1
    Entry historyi
    Integrated into UniProtKB/TrEMBL: March 8, 2011
    Last sequence update: March 8, 2011
    Last modified: October 1, 2014
    This is version 25 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3