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E6WDI1 (E6WDI1_PANSA) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 23. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesRecommended name:
Superoxide dismutase [Cu-Zn] RuleBase RU000393

EC=1.15.1.1 RuleBase RU000393
Gene names
Ordered Locus Names:Pat9b_1690 EMBL ADU69006.1
OrganismPantoea sp. (strain At-9b) [Complete proteome] [HAMAP] EMBL ADU69006.1
Taxonomic identifier592316 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaePantoea

Protein attributes

Sequence length172 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceInferred from homology

General annotation (Comments)

Function

Destroys radicals which are normally produced within the cells and which are toxic to biological systems By similarity. RuleBase RU000393

Catalytic activity

2 superoxide + 2 H+ = O2 + H2O2. RuleBase RU000393

Cofactor

Binds 1 copper ion per subunit By similarity. RuleBase RU000393

Binds 1 zinc ion per subunit By similarity. RuleBase RU000393

Sequence similarities

Belongs to the Cu-Zn superoxide dismutase family. RuleBase RU000393

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2020 Potential EMBL ADU69006.1
Chain21 – 172152 Potential EMBL ADU69006.1
PRO_5000677002

Sequences

Sequence LengthMass (Da)Tools
E6WDI1 [UniParc].

Last modified March 8, 2011. Version 1.
Checksum: 9D169D1C87E19E8C

FASTA17217,494
        10         20         30         40         50         60 
MNRILIAVLA LFCSGVAQAA SEQVTLHKVT EQGIGAAIGK VTISETPWGL QFTPELSGLP 

        70         80         90        100        110        120 
PGIHGFHVHA KGSCEPGESG GKMVAAGAAG GHLDPANTGK HLGPYANGHL GDLPALFVTD 

       130        140        150        160        170 
EGKADYPVLA PRIKSLSEIK GKALMVHMGG DNHADHPQPL GGGGARFACG VI 

« Hide

References

[1]"Complete sequence chromosome of Pantoea sp. At-9b."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Davenport K., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Ovchinnikova G., Pinto A., Currie C., Woyke T.
Submitted (DEC-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: At-9b EMBL ADU69006.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002433 Genomic DNA. Translation: ADU69006.1.
RefSeqYP_004115562.1. NC_014837.1.

3D structure databases

ProteinModelPortalE6WDI1.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADU69006; ADU69006; Pat9b_1690.
GeneID10069123.
KEGGpao:Pat9b_1690.
PATRIC45317744. VBIPanSp129740_1693.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000263449.
KOK04565.
OMADHPKPLG.

Enzyme and pathway databases

BioCycPSP592316:GI0L-1744-MONOMER.

Family and domain databases

Gene3D2.60.40.200. 1 hit.
InterProIPR018152. SOD_Cu/Zn_BS.
IPR001424. SOD_Cu_Zn_dom.
[Graphical view]
PfamPF00080. Sod_Cu. 1 hit.
[Graphical view]
SUPFAMSSF49329. SSF49329. 1 hit.
PROSITEPS00087. SOD_CU_ZN_1. 1 hit.
PS00332. SOD_CU_ZN_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameE6WDI1_PANSA
AccessionPrimary (citable) accession number: E6WDI1
Entry history
Integrated into UniProtKB/TrEMBL: March 8, 2011
Last sequence update: March 8, 2011
Last modified: July 9, 2014
This is version 23 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)