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E6WDI1

- E6WDI1_PANSA

UniProt

E6WDI1 - E6WDI1_PANSA

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Protein

Superoxide dismutase [Cu-Zn]

Gene
Pat9b_1690
Organism
Pantoea sp. (strain At-9b)
Status
Unreviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Destroys radicals which are normally produced within the cells and which are toxic to biological systems By similarity.UniRule annotation

Catalytic activityi

2 superoxide + 2 H+ = O2 + H2O2.UniRule annotation

Cofactori

Binds 1 copper ion per subunit By similarity.UniRule annotation
Binds 1 zinc ion per subunit By similarity.UniRule annotation

GO - Molecular functioni

  1. metal ion binding Source: UniProtKB-KW
  2. superoxide dismutase activity Source: UniProtKB-EC
Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseUniRule annotation

Keywords - Ligandi

CopperUniRule annotation, Metal-bindingUniRule annotation, ZincUniRule annotation

Enzyme and pathway databases

BioCyciPSP592316:GI0L-1744-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Superoxide dismutase [Cu-Zn]UniRule annotation (EC:1.15.1.1UniRule annotation)
Gene namesi
Ordered Locus Names:Pat9b_1690Imported
OrganismiPantoea sp. (strain At-9b)Imported
Taxonomic identifieri592316 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaePantoea
ProteomesiUP000001624: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2020 PredictedImportedAdd
BLAST
Chaini21 – 172152 PredictedImportedPRO_5000677002Add
BLAST

Structurei

3D structure databases

ProteinModelPortaliE6WDI1.

Family & Domainsi

Sequence similaritiesi

Belongs to the Cu-Zn superoxide dismutase family.UniRule annotation

Keywords - Domaini

SignalImported

Phylogenomic databases

HOGENOMiHOG000263449.
KOiK04565.
OMAiDHPKPLG.

Family and domain databases

Gene3Di2.60.40.200. 1 hit.
InterProiIPR018152. SOD_Cu/Zn_BS.
IPR001424. SOD_Cu_Zn_dom.
[Graphical view]
PfamiPF00080. Sod_Cu. 1 hit.
[Graphical view]
SUPFAMiSSF49329. SSF49329. 1 hit.
PROSITEiPS00087. SOD_CU_ZN_1. 1 hit.
PS00332. SOD_CU_ZN_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

E6WDI1-1 [UniParc]FASTAAdd to Basket

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MNRILIAVLA LFCSGVAQAA SEQVTLHKVT EQGIGAAIGK VTISETPWGL    50
QFTPELSGLP PGIHGFHVHA KGSCEPGESG GKMVAAGAAG GHLDPANTGK 100
HLGPYANGHL GDLPALFVTD EGKADYPVLA PRIKSLSEIK GKALMVHMGG 150
DNHADHPQPL GGGGARFACG VI 172
Length:172
Mass (Da):17,494
Last modified:March 8, 2011 - v1
Checksum:i9D169D1C87E19E8C
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002433 Genomic DNA. Translation: ADU69006.1.
RefSeqiWP_013508863.1. NC_014837.1.
YP_004115562.1. NC_014837.1.

Genome annotation databases

EnsemblBacteriaiADU69006; ADU69006; Pat9b_1690.
GeneIDi10069123.
KEGGipao:Pat9b_1690.
PATRICi45317744. VBIPanSp129740_1693.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002433 Genomic DNA. Translation: ADU69006.1 .
RefSeqi WP_013508863.1. NC_014837.1.
YP_004115562.1. NC_014837.1.

3D structure databases

ProteinModelPortali E6WDI1.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ADU69006 ; ADU69006 ; Pat9b_1690 .
GeneIDi 10069123.
KEGGi pao:Pat9b_1690.
PATRICi 45317744. VBIPanSp129740_1693.

Phylogenomic databases

HOGENOMi HOG000263449.
KOi K04565.
OMAi DHPKPLG.

Enzyme and pathway databases

BioCyci PSP592316:GI0L-1744-MONOMER.

Family and domain databases

Gene3Di 2.60.40.200. 1 hit.
InterProi IPR018152. SOD_Cu/Zn_BS.
IPR001424. SOD_Cu_Zn_dom.
[Graphical view ]
Pfami PF00080. Sod_Cu. 1 hit.
[Graphical view ]
SUPFAMi SSF49329. SSF49329. 1 hit.
PROSITEi PS00087. SOD_CU_ZN_1. 1 hit.
PS00332. SOD_CU_ZN_2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Complete sequence chromosome of Pantoea sp. At-9b."
    US DOE Joint Genome Institute
    Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Davenport K., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Ovchinnikova G., Pinto A., Currie C., Woyke T.
    Submitted (DEC-2010) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: At-9bImported.

Entry informationi

Entry nameiE6WDI1_PANSA
AccessioniPrimary (citable) accession number: E6WDI1
Entry historyi
Integrated into UniProtKB/TrEMBL: March 8, 2011
Last sequence update: March 8, 2011
Last modified: September 3, 2014
This is version 24 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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