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E6WDI1

- E6WDI1_PANSA

UniProt

E6WDI1 - E6WDI1_PANSA

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Protein

Superoxide dismutase [Cu-Zn]

Gene

Pat9b_1690

Organism
Pantoea sp. (strain At-9b)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Destroys radicals which are normally produced within the cells and which are toxic to biological systems.UniRule annotation

Catalytic activityi

2 superoxide + 2 H+ = O2 + H2O2.UniRule annotation

Cofactori

Binds 1 copper ion per subunit.UniRule annotation
Binds 1 zinc ion per subunit.UniRule annotation

GO - Molecular functioni

  1. metal ion binding Source: UniProtKB-KW
  2. superoxide dismutase activity Source: UniProtKB-EC
Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseUniRule annotation

Keywords - Ligandi

CopperUniRule annotation, Metal-bindingUniRule annotation, ZincUniRule annotation

Enzyme and pathway databases

BioCyciPSP592316:GI0L-1744-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Superoxide dismutase [Cu-Zn]UniRule annotation (EC:1.15.1.1UniRule annotation)
Gene namesi
Ordered Locus Names:Pat9b_1690Imported
OrganismiPantoea sp. (strain At-9b)Imported
Taxonomic identifieri592316 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaePantoea
ProteomesiUP000001624: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2020 PotentialImportedAdd
BLAST
Chaini21 – 172152 PotentialImportedPRO_5000677002Add
BLAST

Structurei

3D structure databases

ProteinModelPortaliE6WDI1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the Cu-Zn superoxide dismutase family.UniRule annotation

Keywords - Domaini

SignalImported

Phylogenomic databases

HOGENOMiHOG000263449.
KOiK04565.
OMAiDHPKPLG.

Family and domain databases

Gene3Di2.60.40.200. 1 hit.
InterProiIPR018152. SOD_Cu/Zn_BS.
IPR001424. SOD_Cu_Zn_dom.
[Graphical view]
PfamiPF00080. Sod_Cu. 1 hit.
[Graphical view]
SUPFAMiSSF49329. SSF49329. 1 hit.
PROSITEiPS00087. SOD_CU_ZN_1. 1 hit.
PS00332. SOD_CU_ZN_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

E6WDI1-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MNRILIAVLA LFCSGVAQAA SEQVTLHKVT EQGIGAAIGK VTISETPWGL
60 70 80 90 100
QFTPELSGLP PGIHGFHVHA KGSCEPGESG GKMVAAGAAG GHLDPANTGK
110 120 130 140 150
HLGPYANGHL GDLPALFVTD EGKADYPVLA PRIKSLSEIK GKALMVHMGG
160 170
DNHADHPQPL GGGGARFACG VI
Length:172
Mass (Da):17,494
Last modified:March 8, 2011 - v1
Checksum:i9D169D1C87E19E8C
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002433 Genomic DNA. Translation: ADU69006.1.
RefSeqiWP_013508863.1. NC_014837.1.
YP_004115562.1. NC_014837.1.

Genome annotation databases

EnsemblBacteriaiADU69006; ADU69006; Pat9b_1690.
GeneIDi10069123.
KEGGipao:Pat9b_1690.
PATRICi45317744. VBIPanSp129740_1693.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002433 Genomic DNA. Translation: ADU69006.1 .
RefSeqi WP_013508863.1. NC_014837.1.
YP_004115562.1. NC_014837.1.

3D structure databases

ProteinModelPortali E6WDI1.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ADU69006 ; ADU69006 ; Pat9b_1690 .
GeneIDi 10069123.
KEGGi pao:Pat9b_1690.
PATRICi 45317744. VBIPanSp129740_1693.

Phylogenomic databases

HOGENOMi HOG000263449.
KOi K04565.
OMAi DHPKPLG.

Enzyme and pathway databases

BioCyci PSP592316:GI0L-1744-MONOMER.

Family and domain databases

Gene3Di 2.60.40.200. 1 hit.
InterProi IPR018152. SOD_Cu/Zn_BS.
IPR001424. SOD_Cu_Zn_dom.
[Graphical view ]
Pfami PF00080. Sod_Cu. 1 hit.
[Graphical view ]
SUPFAMi SSF49329. SSF49329. 1 hit.
PROSITEi PS00087. SOD_CU_ZN_1. 1 hit.
PS00332. SOD_CU_ZN_2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Complete sequence chromosome of Pantoea sp. At-9b."
    US DOE Joint Genome Institute
    Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Davenport K., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Ovchinnikova G., Pinto A., Currie C., Woyke T.
    Submitted (DEC-2010) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: At-9bImported.

Entry informationi

Entry nameiE6WDI1_PANSA
AccessioniPrimary (citable) accession number: E6WDI1
Entry historyi
Integrated into UniProtKB/TrEMBL: March 8, 2011
Last sequence update: March 8, 2011
Last modified: October 29, 2014
This is version 26 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3