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E6W7F8 (E6W7F8_PANSA) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 19. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Ornithine carbamoyltransferase, catabolic HAMAP-Rule MF_01109
Short name=OTCase HAMAP-Rule MF_01109
EC=2.1.3.3 HAMAP-Rule MF_01109
Alternative name(s):
Ornithine carbamoyltransferase HAMAP-Rule MF_01109
Gene names
Name:arcB HAMAP-Rule MF_01109
Ordered Locus Names:Pat9b_0531 EMBL ADU67856.1
OrganismPantoea sp. (strain At-9b) [Complete proteome] [HAMAP] EMBL ADU67856.1
Taxonomic identifier592316 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Pantoea

Protein attributes

Sequence length335 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

Carbamoyl phosphate + L-ornithine = phosphate + L-citrulline. HAMAP-Rule MF_01109 SAAS SAAS002292

Pathway

Amino-acid degradation; L-arginine degradation via ADI pathway; carbamoyl phosphate from L-arginine: step 2/2. HAMAP-Rule MF_01109

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_01109 SAAS SAAS002292.

Sequence similarities

Belongs to the ATCase/OTCase family. HAMAP-Rule MF_01109 RuleBase RU003634

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Region56 – 605Carbamoyl phosphate binding By similarity HAMAP-Rule MF_01109
Region273 – 2764Ornithine binding By similarity HAMAP-Rule MF_01109

Sites

Binding site1071Carbamoyl phosphate By similarity HAMAP-Rule MF_01109
Binding site1341Carbamoyl phosphate By similarity HAMAP-Rule MF_01109
Site311Important for structural integrity By similarity HAMAP-Rule MF_01109
Site1471Important for structural integrity By similarity HAMAP-Rule MF_01109

Sequences

Sequence LengthMass (Da)Tools
E6W7F8 [UniParc].

Last modified March 8, 2011. Version 1.
Checksum: 3847B64BD372A4D0

FASTA33537,159
        10         20         30         40         50         60 
MSQLNQRHFL RLLDFTPAEI DYLLRLAGEL KHAKKNASET QYLKGKNIAL IFEKDSTRTR 

        70         80         90        100        110        120 
CSFEVAAYDQ GANVTYLGPS GSQIGHKESM KDTARVLGRM YDGIQYRGYG QALVETLAEH 

       130        140        150        160        170        180 
AGVPVWNGLT TEFHPTQLLA DLLTMQEHLP QKSLNEMTLV YVGDARNNMG NSMLEAAAMV 

       190        200        210        220        230        240 
GLDLRLVAPK GCWPEEQLVE QCQIAAQKTG GKITLTEDIA AGVQGADFIY TDVWVSMGED 

       250        260        270        280        290        300 
KSVWSDRIAL LRPYQVNSAM LALTGNPQVK FLHCLPAFHD DQTTLGRQMA EQYGLSDGME 

       310        320        330 
VSNEVFESTH SIVFDQAENR MHTIKAVMVA TLGQP

« Hide

References

[1]"Complete sequence chromosome of Pantoea sp. At-9b."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Davenport K., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Ovchinnikova G., Pinto A., Currie C., Woyke T.
Submitted (DEC-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: At-9b EMBL ADU67856.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP002433 Genomic DNA. Translation: ADU67856.1.
RefSeqYP_004114412.1. NC_014837.1.

3D structure databases

ProteinModelPortalE6W7F8.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADU67856; ADU67856; Pat9b_0531.
GeneID10067932.
KEGGpao:Pat9b_0531.
PATRIC45315347. VBIPanSp129740_0531.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000022686.
KOK00611.

Enzyme and pathway databases

BioCycPSP592316:GI0L-2456-MONOMER.
UniPathwayUPA00254; UER00365.

Family and domain databases

HAMAPMF_01109. OTCase.
InterProIPR006132. Asp/Orn_carbamoyltranf_P-bd.
IPR006130. Asp/Orn_carbamoylTrfase.
IPR006131. Asp_carbamoyltransf_Asp/Orn-bd.
IPR002292. Orn/put_carbamltrans.
IPR024904. Orn_carbamltrans.
[Graphical view]
PfamPF00185. OTCace. 1 hit.
PF02729. OTCace_N. 1 hit.
[Graphical view]
PRINTSPR00100. AOTCASE.
PR00102. OTCASE.
SUPFAMSSF53671. Asp/Orn_carbamoyltranf. 1 hit.
TIGRFAMsTIGR00658. orni_carb_tr. 1 hit.
PROSITEPS00097. CARBAMOYLTRANSFERASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameE6W7F8_PANSA
AccessionPrimary (citable) accession number: E6W7F8
Entry history
Integrated into UniProtKB/TrEMBL: March 8, 2011
Last sequence update: March 8, 2011
Last modified: May 1, 2013
This is version 19 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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