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Protein
Submitted name:

Ribulose-bisphosphate carboxylase

Gene

Daes_2544

Organism
Desulfovibrio aespoeensis (strain ATCC 700646 / DSM 10631 / Aspo-2)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

LyaseImported

Enzyme and pathway databases

BioCyciDAES643562:GH9Z-2597-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Ribulose-bisphosphate carboxylaseImported (EC:4.1.1.39Imported)
Gene namesi
Ordered Locus Names:Daes_2544Imported
OrganismiDesulfovibrio aespoeensis (strain ATCC 700646 / DSM 10631 / Aspo-2)Imported
Taxonomic identifieri643562 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaDesulfovibrionalesDesulfovibrionaceaeDesulfovibrio
ProteomesiUP000002191 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi643562.Daes_2544.

Structurei

3D structure databases

ProteinModelPortaliE6VVI6.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the RuBisCO large chain family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000230831.
KOiK01601.

Family and domain databases

Gene3Di3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
InterProiIPR020878. RuBisCo_large_chain_AS.
IPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
IPR017444. RuBisCO_lsu_N.
[Graphical view]
PfamiPF00016. RuBisCO_large. 1 hit.
PF02788. RuBisCO_large_N. 1 hit.
[Graphical view]
SUPFAMiSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
PROSITEiPS00157. RUBISCO_LARGE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

E6VVI6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSAYDQTSRY VNFDLKEDQL IADGNHVLCA YIYKPANGYG NVEVAAHFAA
60 70 80 90 100
ESSTGTNVEV CTTDDFTKGV DALVYEVSDA SNGDSLMKIA YPVELFDRNI
110 120 130 140 150
IDGRAMLASF LTLCIGNNQG MGDVAYAKMH DFYVPRQYLE LFDGPSKNIA
160 170 180 190 200
DFWRMLGRPT ENGGMIAGTI VKPKLGLRPK PFADACYHFW LGGDFVKNDE
210 220 230 240 250
PQGNQVFAPL KETITAVADA MRRAQDETGE AKIFSANITA DDPREMIARG
260 270 280 290 300
EFILNAFGEN ASRVAFLVDG YVAGPTAITT ARRNFPNQFL HYHRAGHGAV
310 320 330 340 350
TSPQAKRGYT AFVLSKMSRL QGASGIHTGT MGFGKMEGEM ADKSMAYMIE
360 370 380 390 400
REEAQGPYFK QKWYGMKATT PMISGGMNAL RLPGFFDNLG HSNICQTSGG
410 420 430 440 450
GAFGHLDGPT AGALSLRQSH DAWIQGVNLL DYAKEHNELA RAFESFPGDA
460
DRFYPTWRHQ LCL
Length:463
Mass (Da):50,867
Last modified:March 8, 2011 - v1
Checksum:iF9B34669ACCC15A5
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002431 Genomic DNA. Translation: ADU63544.1.
RefSeqiWP_013515453.1. NC_014844.1.
YP_004122290.1. NC_014844.1.

Genome annotation databases

EnsemblBacteriaiADU63544; ADU63544; Daes_2544.
KEGGidas:Daes_2544.
PATRICi45205165. VBIDesAes51796_2576.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002431 Genomic DNA. Translation: ADU63544.1.
RefSeqiWP_013515453.1. NC_014844.1.
YP_004122290.1. NC_014844.1.

3D structure databases

ProteinModelPortaliE6VVI6.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi643562.Daes_2544.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADU63544; ADU63544; Daes_2544.
KEGGidas:Daes_2544.
PATRICi45205165. VBIDesAes51796_2576.

Phylogenomic databases

HOGENOMiHOG000230831.
KOiK01601.

Enzyme and pathway databases

BioCyciDAES643562:GH9Z-2597-MONOMER.

Family and domain databases

Gene3Di3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
InterProiIPR020878. RuBisCo_large_chain_AS.
IPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
IPR017444. RuBisCO_lsu_N.
[Graphical view]
PfamiPF00016. RuBisCO_large. 1 hit.
PF02788. RuBisCO_large_N. 1 hit.
[Graphical view]
SUPFAMiSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
PROSITEiPS00157. RUBISCO_LARGE. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Complete sequence of Desulfovibrio aespoeensis Aspo-2."
    US DOE Joint Genome Institute
    Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Chertkov O., Misra M., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Ovchinnikova G., Pedersen K., Jagevall S., Hazen T., Woyke T.
    Submitted (DEC-2010) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 700646 / DSM 10631 / Aspo-2Imported.

Entry informationi

Entry nameiE6VVI6_DESAO
AccessioniPrimary (citable) accession number: E6VVI6
Entry historyi
Integrated into UniProtKB/TrEMBL: March 8, 2011
Last sequence update: March 8, 2011
Last modified: June 24, 2015
This is version 25 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.