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E6VQD3

- E6VQD3_RHOPX

UniProt

E6VQD3 - E6VQD3_RHOPX

Protein
Submitted name:

Ribulose bisphosphate carboxylase large chain

Gene

Rpdx1_3352

Organism
Rhodopseudomonas palustris (strain DX-1)
Status
Unreviewed - Annotation score: 1 out of 5- Protein inferred from homologyi
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    • History
      Entry version 18 (01 Oct 2014)
      Sequence version 1 (08 Mar 2011)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. magnesium ion binding Source: InterPro
    2. ribulose-bisphosphate carboxylase activity Source: InterPro

    GO - Biological processi

    1. carbon fixation Source: InterPro

    Enzyme and pathway databases

    BioCyciRPAL652103:GHQR-3396-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Ribulose bisphosphate carboxylase large chainImported
    Gene namesi
    Ordered Locus Names:Rpdx1_3352Imported
    OrganismiRhodopseudomonas palustris (strain DX-1)Imported
    Taxonomic identifieri652103 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeRhodopseudomonas
    ProteomesiUP000001402: Chromosome

    Structurei

    3D structure databases

    ProteinModelPortaliE6VQD3.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the RuBisCO large chain family.UniRule annotation

    Phylogenomic databases

    HOGENOMiHOG000230274.
    KOiK01601.

    Family and domain databases

    Gene3Di3.20.20.110. 1 hit.
    3.30.70.150. 1 hit.
    InterProiIPR000685. RuBisCO_lsu_C.
    IPR017443. RuBisCO_lsu_fd_N.
    [Graphical view]
    PfamiPF00016. RuBisCO_large. 2 hits.
    [Graphical view]
    SUPFAMiSSF51649. SSF51649. 1 hit.
    SSF54966. SSF54966. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    E6VQD3-1 [UniParc]FASTAAdd to Basket

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    MNERIVVTYQ VAAAPAEIAA RAEALAIEQS VECPLAAVTE QRIRDEILGR    50
    VEAIEPIGEA RFAVRISLAS ATAPAEPGQL INMLFGNSSI LPDVTLADVE 100
    LPPAYPAAFG GPKFGIGGIR ARLGVPRRAL TASALKPQGL PPEALASLAH 150
    RLALGGIDLI KDDHGIADQA FSPFAARVPA VAAALRQASD SCGATTLYAP 200
    HVSGSLDDMR RQLDIVRREE LPAVMLMPMV VGLANFHLVA KEAAGLIVLA 250
    HPSLAGAQRI APDLLLGKLF RLLGADATIF PHHGGRFAYA PGTCRALAGA 300
    ARRDWHDLKP CLPVPAGGIA IDRIAALLAF YGSDVMLLIG GSLLAAGEHL 350
    TEQAARFTAE VASHGQ 366
    Length:366
    Mass (Da):38,230
    Last modified:March 8, 2011 - v1
    Checksum:i3DFC3E7838B0C9A6
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002418 Genomic DNA. Translation: ADU44923.1.
    RefSeqiYP_004109656.1. NC_014834.1.

    Genome annotation databases

    EnsemblBacteriaiADU44923; ADU44923; Rpdx1_3352.
    GeneIDi10065581.
    KEGGirpx:Rpdx1_3352.
    PATRICi45347083. VBIRhoPal82507_3397.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002418 Genomic DNA. Translation: ADU44923.1 .
    RefSeqi YP_004109656.1. NC_014834.1.

    3D structure databases

    ProteinModelPortali E6VQD3.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ADU44923 ; ADU44923 ; Rpdx1_3352 .
    GeneIDi 10065581.
    KEGGi rpx:Rpdx1_3352.
    PATRICi 45347083. VBIRhoPal82507_3397.

    Phylogenomic databases

    HOGENOMi HOG000230274.
    KOi K01601.

    Enzyme and pathway databases

    BioCyci RPAL652103:GHQR-3396-MONOMER.

    Family and domain databases

    Gene3Di 3.20.20.110. 1 hit.
    3.30.70.150. 1 hit.
    InterProi IPR000685. RuBisCO_lsu_C.
    IPR017443. RuBisCO_lsu_fd_N.
    [Graphical view ]
    Pfami PF00016. RuBisCO_large. 2 hits.
    [Graphical view ]
    SUPFAMi SSF51649. SSF51649. 1 hit.
    SSF54966. SSF54966. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Complete sequence of Rhodopseudomonas palustris DX-1."
      Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Misra M., Chertkov O., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Ovchinnikova G., Logan B., Oda Y., Harwood C., Woyke T.
      Submitted (DEC-2010) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: DX-1Imported.

    Entry informationi

    Entry nameiE6VQD3_RHOPX
    AccessioniPrimary (citable) accession number: E6VQD3
    Entry historyi
    Integrated into UniProtKB/TrEMBL: March 8, 2011
    Last sequence update: March 8, 2011
    Last modified: October 1, 2014
    This is version 18 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3