E6VQD3 (E6VQD3_RHOPX) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Ribulose bisphosphate carboxylase large chain EMBL ADU44923.1

Gene names

Ordered Locus Names:

Rpdx1_3352

Organism

Rhodopseudomonas palustris (strain DX-1) [Complete proteome] [HAMAP] EMBL ADU44923.1

Taxonomic identifier

652103 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Bradyrhizobiaceae › Rhodopseudomonas › Rhodopseudomonas palustris

Protein attributes

Sequence length	366 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the RuBisCO large chain family. RuleBase RU004228

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	carbon fixation Inferred from electronic annotation. Source: InterPro
Molecular_function	magnesium ion binding Inferred from electronic annotation. Source: InterPro ribulose-bisphosphate carboxylase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	E6VQD3 [UniParc]. Last modified March 8, 2011. Version 1. Checksum: 3DFC3E7838B0C9A6	FASTA	366	38,230
	10 20 30 40 50 60 MNERIVVTYQ VAAAPAEIAA RAEALAIEQS VECPLAAVTE QRIRDEILGR VEAIEPIGEA 70 80 90 100 110 120 RFAVRISLAS ATAPAEPGQL INMLFGNSSI LPDVTLADVE LPPAYPAAFG GPKFGIGGIR 130 140 150 160 170 180 ARLGVPRRAL TASALKPQGL PPEALASLAH RLALGGIDLI KDDHGIADQA FSPFAARVPA 190 200 210 220 230 240 VAAALRQASD SCGATTLYAP HVSGSLDDMR RQLDIVRREE LPAVMLMPMV VGLANFHLVA 250 260 270 280 290 300 KEAAGLIVLA HPSLAGAQRI APDLLLGKLF RLLGADATIF PHHGGRFAYA PGTCRALAGA 310 320 330 340 350 360 ARRDWHDLKP CLPVPAGGIA IDRIAALLAF YGSDVMLLIG GSLLAAGEHL TEQAARFTAE VASHGQ

References

[1]

"Complete sequence of Rhodopseudomonas palustris DX-1." Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Misra M., Chertkov O., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Ovchinnikova G., Logan B., Oda Y., Harwood C., Woyke T. Submitted (DEC-2010) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DX-1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002418 Genomic DNA. Translation: ADU44923.1.
RefSeq	YP_004109656.1. NC_014834.1.
3D structure databases
ProteinModelPortal	E6VQD3.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ADU44923; ADU44923; Rpdx1_3352.
GeneID	10065581.
KEGG	rpx:Rpdx1_3352.
PATRIC	45347083. VBIRhoPal82507_3397.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000230274.
KO	K01601.
Enzyme and pathway databases
BioCyc	RPAL652103:GHQR-3395-MONOMER.
Family and domain databases
Gene3D	3.20.20.110. 1 hit. 3.30.70.150. 1 hit.
InterPro	IPR000685. RuBisCO_lsu_C. IPR017443. RuBisCO_lsu_fd_N. [Graphical view]
Pfam	PF00016. RuBisCO_large. 2 hits. [Graphical view]
SUPFAM	SSF51649. RuBisCO_large. 1 hit. SSF54966. RuBisCO_large. 1 hit.
ProtoNet	Search...

Entry information

Entry name

E6VQD3_RHOPX

Accession

Primary (citable) accession number: E6VQD3

Entry history

Integrated into UniProtKB/TrEMBL:	March 8, 2011
Last sequence update:	March 8, 2011
Last modified:	May 1, 2013
This is version 14 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)