Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

E6VQD3 (E6VQD3_RHOPX) Unreviewed, UniProtKB/TrEMBL

Last modified January 22, 2014. Version 17. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
Gene names
Ordered Locus Names:Rpdx1_3352 EMBL ADU44923.1
OrganismRhodopseudomonas palustris (strain DX-1) [Complete proteome] [HAMAP] EMBL ADU44923.1
Taxonomic identifier652103 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeRhodopseudomonas

Protein attributes

Sequence length366 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the RuBisCO large chain family. RuleBase RU004228

Ontologies

Sequences

Sequence LengthMass (Da)Tools
E6VQD3 [UniParc].

Last modified March 8, 2011. Version 1.
Checksum: 3DFC3E7838B0C9A6

FASTA36638,230
        10         20         30         40         50         60 
MNERIVVTYQ VAAAPAEIAA RAEALAIEQS VECPLAAVTE QRIRDEILGR VEAIEPIGEA 

        70         80         90        100        110        120 
RFAVRISLAS ATAPAEPGQL INMLFGNSSI LPDVTLADVE LPPAYPAAFG GPKFGIGGIR 

       130        140        150        160        170        180 
ARLGVPRRAL TASALKPQGL PPEALASLAH RLALGGIDLI KDDHGIADQA FSPFAARVPA 

       190        200        210        220        230        240 
VAAALRQASD SCGATTLYAP HVSGSLDDMR RQLDIVRREE LPAVMLMPMV VGLANFHLVA 

       250        260        270        280        290        300 
KEAAGLIVLA HPSLAGAQRI APDLLLGKLF RLLGADATIF PHHGGRFAYA PGTCRALAGA 

       310        320        330        340        350        360 
ARRDWHDLKP CLPVPAGGIA IDRIAALLAF YGSDVMLLIG GSLLAAGEHL TEQAARFTAE 


VASHGQ 

« Hide

References

[1]"Complete sequence of Rhodopseudomonas palustris DX-1."
Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Misra M., Chertkov O., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Ovchinnikova G., Logan B., Oda Y., Harwood C., Woyke T.
Submitted (DEC-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DX-1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002418 Genomic DNA. Translation: ADU44923.1.
RefSeqYP_004109656.1. NC_014834.1.

3D structure databases

ProteinModelPortalE6VQD3.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADU44923; ADU44923; Rpdx1_3352.
GeneID10065581.
KEGGrpx:Rpdx1_3352.
PATRIC45347083. VBIRhoPal82507_3397.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000230274.
KOK01601.

Enzyme and pathway databases

BioCycRPAL652103:GHQR-3396-MONOMER.

Family and domain databases

Gene3D3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
InterProIPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
[Graphical view]
PfamPF00016. RuBisCO_large. 2 hits.
[Graphical view]
SUPFAMSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
ProtoNetSearch...

Entry information

Entry nameE6VQD3_RHOPX
AccessionPrimary (citable) accession number: E6VQD3
Entry history
Integrated into UniProtKB/TrEMBL: March 8, 2011
Last sequence update: March 8, 2011
Last modified: January 22, 2014
This is version 17 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)