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E6VNS8 (E6VNS8_RHOPX) Unreviewed, UniProtKB/TrEMBL

Last modified May 29, 2013. Version 17. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Spermidine/putrescine ABC transporter ATPase subunit EMBL ADU45924.1
Gene names
Ordered Locus Names:Rpdx1_4372
OrganismRhodopseudomonas palustris (strain DX-1) [Complete proteome] [HAMAP] EMBL ADU45924.1
Taxonomic identifier652103 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Bradyrhizobiaceae › Rhodopseudomonas ›

Protein attributes

Sequence length381 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system By similarity. SAAS SAAS005893

Catalytic activity

ATP + H2O + polyamine(Out) = ADP + phosphate + polyamine(In). SAAS SAAS005893

Subunit structure

The complex is composed of two ATP-binding proteins (PotA), two transmembrane proteins (PotB and PotC) and a solute-binding protein (PotD) By similarity. SAAS SAAS005893

Sequence similarities

Belongs to the ABC transporter superfamily. RuleBase RU000684

Contains 1 ABC transporter domain. SAAS SAAS005893

Sequences

Sequence LengthMass (Da)Tools
E6VNS8 [UniParc].

Last modified March 8, 2011. Version 1.
Checksum: 4B417DB7D57D0EB3

FASTA38141,055
        10         20         30         40         50         60 
MTEHAGYPAP AEVAGEPLLR IEAVEKRFGG FVAVDRLSLD IKAGEFFALL GPSGCGKTTL 

        70         80         90        100        110        120 
LRMLAGFETP DAGRILLNGV DIAAVLPHER PVNMMFQNYA LFPHLNVAAN IAFGLKRARL 

       130        140        150        160        170        180 
PRKEIKARVA EMLALVRLDG LGKRKPDQLS GGQQQRVALA RALALRPKLL LLDEPMAALD 

       190        200        210        220        230        240 
KKLRESTQLE LIALQKRLGM TFVIVTHDQQ EAMTVADRIG VMRAGKLDQV AAPRQLYEAP 

       250        260        270        280        290        300 
ASRWVAEFVG DVNMLEGSVA GRDHGRITVA TGGAGEVVVA EPREAIEAEA ICVAIRPEKI 

       310        320        330        340        350        360 
KLSLRGPAAD AGHADAINRL DGTITDIGYA GGMTSYKVRL DHGATLLAAM ANTTRLDVDA 

       370        380 
YHAGQHVVAW FSPDDCVVLT R

« Hide

References

[1]"Complete sequence of Rhodopseudomonas palustris DX-1."
Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Misra M., Chertkov O., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Ovchinnikova G., Logan B., Oda Y., Harwood C., Woyke T.
Submitted (DEC-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DX-1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP002418 Genomic DNA. Translation: ADU45924.1.
RefSeqYP_004110657.1. NC_014834.1.

3D structure databases

ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADU45924; ADU45924; Rpdx1_4372.
GeneID10066608.
KEGGrpx:Rpdx1_4372.
PATRIC45349240. VBIRhoPal82507_4456.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK11076.

Enzyme and pathway databases

BioCycRPAL652103:GHQR-4423-MONOMER.

Family and domain databases

InterProIPR003593. AAA+_ATPase.
IPR003439. ABC_transporter-like.
IPR017871. ABC_transporter_CS.
IPR008995. Mo/tungstate-bd_C_term_dom.
IPR027417. P-loop_NTPase.
IPR005893. Sp_pt_ABC_ATP-bd.
IPR013611. Transp-assoc_OB_typ2.
[Graphical view]
PfamPF00005. ABC_tran. 1 hit.
PF08402. TOBE_2. 1 hit.
[Graphical view]
SMARTSM00382. AAA. 1 hit.
[Graphical view]
SUPFAMSSF50331. MOP_like. 1 hit.
SSF52540. SSF52540. 1 hit.
TIGRFAMsTIGR01187. potA. 1 hit.
PROSITEPS00211. ABC_TRANSPORTER_1. 1 hit.
PS50893. ABC_TRANSPORTER_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameE6VNS8_RHOPX
AccessionPrimary (citable) accession number: E6VNS8
Entry history
Integrated into UniProtKB/TrEMBL: March 8, 2011
Last sequence update: March 8, 2011
Last modified: May 29, 2013
This is version 17 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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