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Protein
Submitted name:

Trehalose synthase

Gene

Rpdx1_1708

Organism
Rhodopseudomonas palustris (strain DX-1)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Enzyme and pathway databases

BioCyciRPAL652103:GHQR-1723-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Trehalose synthaseImported
Gene namesi
Ordered Locus Names:Rpdx1_1708Imported
OrganismiRhodopseudomonas palustris (strain DX-1)Imported
Taxonomic identifieri652103 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeRhodopseudomonas
ProteomesiUP000001402 Componenti: Chromosome

PTM / Processingi

Proteomic databases

PRIDEiE6VKT6.

Interactioni

Protein-protein interaction databases

STRINGi652103.Rpdx1_1708.

Structurei

3D structure databases

ProteinModelPortaliE6VKT6.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000268420.
KOiK05343.
OMAiRDGTNNE.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 3 hits.
InterProiIPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR011009. Kinase-like_dom.
IPR012810. TreS/a-amylase_N.
IPR012811. TreS_maltokin_C_dom.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 2 hits.
SSF56112. SSF56112. 3 hits.
TIGRFAMsiTIGR02457. TreS_Cterm. 1 hit.
TIGR02456. treS_nterm. 1 hit.

Sequencei

Sequence statusi: Complete.

E6VKT6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNEMSPIVAN DRPGDDASDE LWYKDAIIYQ LHVKAFADSN NDGIGDFAGL
60 70 80 90 100
TEKLDYLQEL GVNTLWLLPF YPSPQRDDGY DIADYGSINP DFGTMKDFRR
110 120 130 140 150
FIFEAKRRNL RVITELVVNH TSDQHAWFKR ARRSPKNSSA RNWYVWSDTD
160 170 180 190 200
QKYQGTRIIF TDTEKSNWTW DPEAGQYYWH RFFSHQPDLN FDNPRVVGAV
210 220 230 240 250
VKVMKRWLDN GVDGFRLDAI PYLCERDGTN NENLPETHAV IKRLRAELDA
260 270 280 290 300
YAKGKLLLAE ANQWPEDVQQ YFGDSDECHM AYHFPLMPRI YMAIAQEDRF
310 320 330 340 350
PITDIMRQTP EIPPNCQWAM FLRNHDELTL EMVTDVERDY LWKTYAADPR
360 370 380 390 400
ARINVGIRRR LAPLMDNDRR KIELMNSLLL SFPGTPIIYY GDEIGMGDNI
410 420 430 440 450
YLGDRNGVRT PMQWSSDRNG GFSRADPARL YAPPIMDPVY GYASVNVEAQ
460 470 480 490 500
QRSLSSLLSA MKRLIAVRKS TSAFGRGSMT FIRPSNRAVL AYVRQHEDEV
510 520 530 540 550
ILCVANLSRA AQATELDLSP WKERVPQEML GRTKFPPIGE LPYMITLAPF
560 570 580 590 600
GFYWFKLEEP GTAAHVAPVS TVPEFVTLVV PLGSTWMTLG RTRSMFEHEV
610 620 630 640 650
LPTFLSRTRW FPERNPRAIH PRLTSAIPFA NDGDNRPWLA LFEATLRGTT
660 670 680 690 700
ARYLLPMQID WVRFDRERYN PRAYAAVRQG AREGTLLDVA ADPSFVDLLL
710 720 730 740 750
QNVRSALTVI GDDGNRLEFR PGSLLAERPA GPFENIRPVD AEQSNSTSLI
760 770 780 790 800
DEDYVVKLYR RLQVGINPEL EMGRFLTEVA GYRNTPALLG SVELVEGDTT
810 820 830 840 850
TAIAVVHEFI GNQGDGWTLT AGYLDRYVDE QRVLTGNPEA AESDQFAPYL
860 870 880 890 900
HFMQHTGRRV AEMHIALAGH PELPDFAPEP IGPDEARSWV ATVSAAAERV
910 920 930 940 950
LGELRRRRDG FSDPDKALVD RLLAAREILM GRIGEFLGDD GGLNIRHHGD
960 970 980 990 1000
FHLGQMLIVK DDIYIIDFEG EPRRTLAERR AKAPAARDVA GLVRSIDYST
1010 1020 1030 1040 1050
TAALTRALKT PPDEPGRLNE ALELWRIRAT TAFLDGYRQT MGESPVWPAD
1060 1070 1080 1090 1100
PDAADRWLDF FLIEKALYEI DYEIAHRPDW LRVPLAGILR ILSPPPEEFP
Length:1,100
Mass (Da):125,282
Last modified:March 8, 2011 - v1
Checksum:i607FFC26FE5D06A3
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002418 Genomic DNA. Translation: ADU43325.1.
RefSeqiWP_013501473.1. NC_014834.1.

Genome annotation databases

EnsemblBacteriaiADU43325; ADU43325; Rpdx1_1708.
KEGGirpx:Rpdx1_1708.
PATRICi45343692. VBIRhoPal82507_1742.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002418 Genomic DNA. Translation: ADU43325.1.
RefSeqiWP_013501473.1. NC_014834.1.

3D structure databases

ProteinModelPortaliE6VKT6.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi652103.Rpdx1_1708.

Proteomic databases

PRIDEiE6VKT6.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADU43325; ADU43325; Rpdx1_1708.
KEGGirpx:Rpdx1_1708.
PATRICi45343692. VBIRhoPal82507_1742.

Phylogenomic databases

HOGENOMiHOG000268420.
KOiK05343.
OMAiRDGTNNE.

Enzyme and pathway databases

BioCyciRPAL652103:GHQR-1723-MONOMER.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 3 hits.
InterProiIPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR011009. Kinase-like_dom.
IPR012810. TreS/a-amylase_N.
IPR012811. TreS_maltokin_C_dom.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 2 hits.
SSF56112. SSF56112. 3 hits.
TIGRFAMsiTIGR02457. TreS_Cterm. 1 hit.
TIGR02456. treS_nterm. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Complete sequence of Rhodopseudomonas palustris DX-1."
    Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Misra M., Chertkov O., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Ovchinnikova G., Logan B., Oda Y., Harwood C., Woyke T.
    Submitted (DEC-2010) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DX-1Imported.

Entry informationi

Entry nameiE6VKT6_RHOPX
AccessioniPrimary (citable) accession number: E6VKT6
Entry historyi
Integrated into UniProtKB/TrEMBL: March 8, 2011
Last sequence update: March 8, 2011
Last modified: July 22, 2015
This is version 26 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.