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E6VKT6 (E6VKT6_RHOPX) Unreviewed, UniProtKB/TrEMBL

Last modified October 16, 2013. Version 19. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Rpdx1_1708 EMBL ADU43325.1
OrganismRhodopseudomonas palustris (strain DX-1) [Complete proteome] [HAMAP] EMBL ADU43325.1
Taxonomic identifier652103 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeRhodopseudomonas

Protein attributes

Sequence length1100 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
E6VKT6 [UniParc].

Last modified March 8, 2011. Version 1.
Checksum: 607FFC26FE5D06A3

FASTA1,100125,282
        10         20         30         40         50         60 
MNEMSPIVAN DRPGDDASDE LWYKDAIIYQ LHVKAFADSN NDGIGDFAGL TEKLDYLQEL 

        70         80         90        100        110        120 
GVNTLWLLPF YPSPQRDDGY DIADYGSINP DFGTMKDFRR FIFEAKRRNL RVITELVVNH 

       130        140        150        160        170        180 
TSDQHAWFKR ARRSPKNSSA RNWYVWSDTD QKYQGTRIIF TDTEKSNWTW DPEAGQYYWH 

       190        200        210        220        230        240 
RFFSHQPDLN FDNPRVVGAV VKVMKRWLDN GVDGFRLDAI PYLCERDGTN NENLPETHAV 

       250        260        270        280        290        300 
IKRLRAELDA YAKGKLLLAE ANQWPEDVQQ YFGDSDECHM AYHFPLMPRI YMAIAQEDRF 

       310        320        330        340        350        360 
PITDIMRQTP EIPPNCQWAM FLRNHDELTL EMVTDVERDY LWKTYAADPR ARINVGIRRR 

       370        380        390        400        410        420 
LAPLMDNDRR KIELMNSLLL SFPGTPIIYY GDEIGMGDNI YLGDRNGVRT PMQWSSDRNG 

       430        440        450        460        470        480 
GFSRADPARL YAPPIMDPVY GYASVNVEAQ QRSLSSLLSA MKRLIAVRKS TSAFGRGSMT 

       490        500        510        520        530        540 
FIRPSNRAVL AYVRQHEDEV ILCVANLSRA AQATELDLSP WKERVPQEML GRTKFPPIGE 

       550        560        570        580        590        600 
LPYMITLAPF GFYWFKLEEP GTAAHVAPVS TVPEFVTLVV PLGSTWMTLG RTRSMFEHEV 

       610        620        630        640        650        660 
LPTFLSRTRW FPERNPRAIH PRLTSAIPFA NDGDNRPWLA LFEATLRGTT ARYLLPMQID 

       670        680        690        700        710        720 
WVRFDRERYN PRAYAAVRQG AREGTLLDVA ADPSFVDLLL QNVRSALTVI GDDGNRLEFR 

       730        740        750        760        770        780 
PGSLLAERPA GPFENIRPVD AEQSNSTSLI DEDYVVKLYR RLQVGINPEL EMGRFLTEVA 

       790        800        810        820        830        840 
GYRNTPALLG SVELVEGDTT TAIAVVHEFI GNQGDGWTLT AGYLDRYVDE QRVLTGNPEA 

       850        860        870        880        890        900 
AESDQFAPYL HFMQHTGRRV AEMHIALAGH PELPDFAPEP IGPDEARSWV ATVSAAAERV 

       910        920        930        940        950        960 
LGELRRRRDG FSDPDKALVD RLLAAREILM GRIGEFLGDD GGLNIRHHGD FHLGQMLIVK 

       970        980        990       1000       1010       1020 
DDIYIIDFEG EPRRTLAERR AKAPAARDVA GLVRSIDYST TAALTRALKT PPDEPGRLNE 

      1030       1040       1050       1060       1070       1080 
ALELWRIRAT TAFLDGYRQT MGESPVWPAD PDAADRWLDF FLIEKALYEI DYEIAHRPDW 

      1090       1100 
LRVPLAGILR ILSPPPEEFP 

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References

[1]"Complete sequence of Rhodopseudomonas palustris DX-1."
Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Misra M., Chertkov O., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Ovchinnikova G., Logan B., Oda Y., Harwood C., Woyke T.
Submitted (DEC-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DX-1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002418 Genomic DNA. Translation: ADU43325.1.
RefSeqYP_004108058.1. NC_014834.1.

3D structure databases

ProteinModelPortalE6VKT6.
ModBaseSearch...
MobiDBSearch...

Proteomic databases

PRIDEE6VKT6.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADU43325; ADU43325; Rpdx1_1708.
GeneID10063909.
KEGGrpx:Rpdx1_1708.
PATRIC45343692. VBIRhoPal82507_1742.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000268420.
KOK05343.

Enzyme and pathway databases

BioCycRPAL652103:GHQR-1723-MONOMER.

Family and domain databases

Gene3D2.60.40.1180. 1 hit.
3.20.20.80. 3 hits.
InterProIPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR011009. Kinase-like_dom.
IPR012810. TreS/a-amylase_N.
IPR012811. TreS_maltokin_C_dom.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
[Graphical view]
SMARTSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMSSF51445. SSF51445. 2 hits.
SSF56112. SSF56112. 3 hits.
TIGRFAMsTIGR02457. TreS_Cterm. 1 hit.
TIGR02456. treS_nterm. 1 hit.
ProtoNetSearch...

Entry information

Entry nameE6VKT6_RHOPX
AccessionPrimary (citable) accession number: E6VKT6
Entry history
Integrated into UniProtKB/TrEMBL: March 8, 2011
Last sequence update: March 8, 2011
Last modified: October 16, 2013
This is version 19 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)