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E6VIY3 (E6VIY3_RHOPX) Unreviewed, UniProtKB/TrEMBL

Last modified January 22, 2014. Version 16. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=4.1.1.39 EMBL ADU42013.1
Gene names
Ordered Locus Names:Rpdx1_0372 EMBL ADU42013.1
OrganismRhodopseudomonas palustris (strain DX-1) [Complete proteome] [HAMAP] EMBL ADU42013.1
Taxonomic identifier652103 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeRhodopseudomonas

Protein attributes

Sequence length432 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the RuBisCO large chain family. RuleBase RU004228

Ontologies

Keywords
   Molecular functionLyase EMBL ADU42013.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbon fixation

Inferred from electronic annotation. Source: InterPro

   Molecular_functionmagnesium ion binding

Inferred from electronic annotation. Source: InterPro

ribulose-bisphosphate carboxylase activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
E6VIY3 [UniParc].

Last modified March 8, 2011. Version 1.
Checksum: D1C37E0D0BC0CA7C

FASTA43246,416
        10         20         30         40         50         60 
MTPDDIAGFY ARRSELNLDD YIELDFDFEC AGDPREAAAH LCSEQSTAQW RRVGFDEDFR 

        70         80         90        100        110        120 
PRFAAKVLEL SAEPRPSGFS TSVECAARGE VHACRVTIAH PHGNFGAKIP TLLSAVCGEG 

       130        140        150        160        170        180 
VFFSPGIPLI RLQDIRFPDA YLAAFDGPRF GIAGLRERLQ AFDRPIFFGV IKPNIGLPPQ 

       190        200        210        220        230        240 
PFAELGYQSW SGGLDIAKDD EMLADVEWCP LAERAALLGD ACRRASAETG VPKIYLANIT 

       250        260        270        280        290        300 
DEVDRLTELH DVAVANGAGA LLVNAMPVGL SAVRMLRKHA TVPLMAHFPF IAAFSRLANY 

       310        320        330        340        350        360 
GIHSRVMTRL QRLAGFDVVI MPGFGPRMMT PEHEVLDCIR ACLEPMGPIK PCLPVPGGSD 

       370        380        390        400        410        420 
SAATLENVYR KVGSADFGFV PGRGVFGHPM GPAAGAASIR QAWDAIAAGI PVADHAAGHP 

       430 
ELAAALQAFG GR 

« Hide

References

[1]"Complete sequence of Rhodopseudomonas palustris DX-1."
Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Misra M., Chertkov O., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Ovchinnikova G., Logan B., Oda Y., Harwood C., Woyke T.
Submitted (DEC-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DX-1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002418 Genomic DNA. Translation: ADU42013.1.
RefSeqYP_004106746.1. NC_014834.1.

3D structure databases

ProteinModelPortalE6VIY3.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADU42013; ADU42013; Rpdx1_0372.
GeneID10062564.
KEGGrpx:Rpdx1_0372.
PATRIC45340933. VBIRhoPal82507_0385.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000230831.
KOK01601.

Enzyme and pathway databases

BioCycRPAL652103:GHQR-378-MONOMER.

Family and domain databases

Gene3D3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
InterProIPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
[Graphical view]
PfamPF00016. RuBisCO_large. 2 hits.
[Graphical view]
SUPFAMSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
ProtoNetSearch...

Entry information

Entry nameE6VIY3_RHOPX
AccessionPrimary (citable) accession number: E6VIY3
Entry history
Integrated into UniProtKB/TrEMBL: March 8, 2011
Last sequence update: March 8, 2011
Last modified: January 22, 2014
This is version 16 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)