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E6VIY3

- E6VIY3_RHOPX

UniProt

E6VIY3 - E6VIY3_RHOPX

Protein
Submitted name:

Ribulose-bisphosphate carboxylase

Gene

Rpdx1_0372

Organism
Rhodopseudomonas palustris (strain DX-1)
Status
Unreviewed - Annotation score: 1 out of 5- Protein inferred from homologyi
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    • History
      Entry version 18 (01 Oct 2014)
      Sequence version 1 (08 Mar 2011)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. magnesium ion binding Source: InterPro
    2. ribulose-bisphosphate carboxylase activity Source: UniProtKB-EC

    GO - Biological processi

    1. carbon fixation Source: InterPro

    Keywords - Molecular functioni

    LyaseImported

    Enzyme and pathway databases

    BioCyciRPAL652103:GHQR-378-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Ribulose-bisphosphate carboxylaseImported (EC:4.1.1.39Imported)
    Gene namesi
    Ordered Locus Names:Rpdx1_0372Imported
    OrganismiRhodopseudomonas palustris (strain DX-1)Imported
    Taxonomic identifieri652103 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeRhodopseudomonas
    ProteomesiUP000001402: Chromosome

    Structurei

    3D structure databases

    ProteinModelPortaliE6VIY3.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the RuBisCO large chain family.UniRule annotation

    Phylogenomic databases

    HOGENOMiHOG000230831.
    KOiK01601.

    Family and domain databases

    Gene3Di3.20.20.110. 1 hit.
    3.30.70.150. 1 hit.
    InterProiIPR000685. RuBisCO_lsu_C.
    IPR017443. RuBisCO_lsu_fd_N.
    [Graphical view]
    PfamiPF00016. RuBisCO_large. 2 hits.
    [Graphical view]
    SUPFAMiSSF51649. SSF51649. 1 hit.
    SSF54966. SSF54966. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    E6VIY3-1 [UniParc]FASTAAdd to Basket

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    MTPDDIAGFY ARRSELNLDD YIELDFDFEC AGDPREAAAH LCSEQSTAQW    50
    RRVGFDEDFR PRFAAKVLEL SAEPRPSGFS TSVECAARGE VHACRVTIAH 100
    PHGNFGAKIP TLLSAVCGEG VFFSPGIPLI RLQDIRFPDA YLAAFDGPRF 150
    GIAGLRERLQ AFDRPIFFGV IKPNIGLPPQ PFAELGYQSW SGGLDIAKDD 200
    EMLADVEWCP LAERAALLGD ACRRASAETG VPKIYLANIT DEVDRLTELH 250
    DVAVANGAGA LLVNAMPVGL SAVRMLRKHA TVPLMAHFPF IAAFSRLANY 300
    GIHSRVMTRL QRLAGFDVVI MPGFGPRMMT PEHEVLDCIR ACLEPMGPIK 350
    PCLPVPGGSD SAATLENVYR KVGSADFGFV PGRGVFGHPM GPAAGAASIR 400
    QAWDAIAAGI PVADHAAGHP ELAAALQAFG GR 432
    Length:432
    Mass (Da):46,416
    Last modified:March 8, 2011 - v1
    Checksum:iD1C37E0D0BC0CA7C
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002418 Genomic DNA. Translation: ADU42013.1.
    RefSeqiWP_013500212.1. NC_014834.1.
    YP_004106746.1. NC_014834.1.

    Genome annotation databases

    EnsemblBacteriaiADU42013; ADU42013; Rpdx1_0372.
    GeneIDi10062564.
    KEGGirpx:Rpdx1_0372.
    PATRICi45340933. VBIRhoPal82507_0385.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002418 Genomic DNA. Translation: ADU42013.1 .
    RefSeqi WP_013500212.1. NC_014834.1.
    YP_004106746.1. NC_014834.1.

    3D structure databases

    ProteinModelPortali E6VIY3.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ADU42013 ; ADU42013 ; Rpdx1_0372 .
    GeneIDi 10062564.
    KEGGi rpx:Rpdx1_0372.
    PATRICi 45340933. VBIRhoPal82507_0385.

    Phylogenomic databases

    HOGENOMi HOG000230831.
    KOi K01601.

    Enzyme and pathway databases

    BioCyci RPAL652103:GHQR-378-MONOMER.

    Family and domain databases

    Gene3Di 3.20.20.110. 1 hit.
    3.30.70.150. 1 hit.
    InterProi IPR000685. RuBisCO_lsu_C.
    IPR017443. RuBisCO_lsu_fd_N.
    [Graphical view ]
    Pfami PF00016. RuBisCO_large. 2 hits.
    [Graphical view ]
    SUPFAMi SSF51649. SSF51649. 1 hit.
    SSF54966. SSF54966. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Complete sequence of Rhodopseudomonas palustris DX-1."
      Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Misra M., Chertkov O., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Ovchinnikova G., Logan B., Oda Y., Harwood C., Woyke T.
      Submitted (DEC-2010) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: DX-1Imported.

    Entry informationi

    Entry nameiE6VIY3_RHOPX
    AccessioniPrimary (citable) accession number: E6VIY3
    Entry historyi
    Integrated into UniProtKB/TrEMBL: March 8, 2011
    Last sequence update: March 8, 2011
    Last modified: October 1, 2014
    This is version 18 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3