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Protein
Submitted name:

Ribulose-bisphosphate carboxylase

Gene

Rpdx1_3959

Organism
Rhodopseudomonas palustris (strain DX-1)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

LyaseImported

Enzyme and pathway databases

BioCyciRPAL652103:GHQR-4007-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Ribulose-bisphosphate carboxylaseImported (EC:4.1.1.39Imported)
Gene namesi
Ordered Locus Names:Rpdx1_3959Imported
OrganismiRhodopseudomonas palustris (strain DX-1)Imported
Taxonomic identifieri652103 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeRhodopseudomonas
Proteomesi
  • UP000001402 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi652103.Rpdx1_3959.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini4 – 103100RuBisCO_smallInterPro annotationAdd
BLAST

Phylogenomic databases

eggNOGiENOG4108VFZ. Bacteria.
COG4451. LUCA.
HOGENOMiHOG000141331.
KOiK01602.
OMAiWEMWGNP.
OrthoDBiPOG091H13LH.

Family and domain databases

Gene3Di3.30.190.10. 1 hit.
InterProiIPR000894. RuBisCO_sc_dom.
[Graphical view]
PfamiPF00101. RuBisCO_small. 1 hit.
[Graphical view]
SMARTiSM00961. RuBisCO_small. 1 hit.
[Graphical view]
SUPFAMiSSF55239. SSF55239. 1 hit.

Sequencei

Sequence statusi: Complete.

E6VIT8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRLTQGCFSF LPDLTDEQIA AQVQYALSKG WAVNLEFTDD PHPRNTYWEM
60 70 80 90 100
WGLPMFDLQD AAGVMMELNE CRKIYGDRYI RLSAFDSSHG WESVRLSFIV
110 120 130 140
NRPKDEPGFR LDRQESDGRN MRYTTRAYSA DKPEGRRYGG
Length:140
Mass (Da):16,315
Last modified:March 8, 2011 - v1
Checksum:i364E91081FC2E8EE
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002418 Genomic DNA. Translation: ADU45515.1.
RefSeqiWP_013503624.1. NC_014834.1.

Genome annotation databases

EnsemblBacteriaiADU45515; ADU45515; Rpdx1_3959.
KEGGirpx:Rpdx1_3959.
PATRICi45348362. VBIRhoPal82507_4024.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002418 Genomic DNA. Translation: ADU45515.1.
RefSeqiWP_013503624.1. NC_014834.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi652103.Rpdx1_3959.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADU45515; ADU45515; Rpdx1_3959.
KEGGirpx:Rpdx1_3959.
PATRICi45348362. VBIRhoPal82507_4024.

Phylogenomic databases

eggNOGiENOG4108VFZ. Bacteria.
COG4451. LUCA.
HOGENOMiHOG000141331.
KOiK01602.
OMAiWEMWGNP.
OrthoDBiPOG091H13LH.

Enzyme and pathway databases

BioCyciRPAL652103:GHQR-4007-MONOMER.

Family and domain databases

Gene3Di3.30.190.10. 1 hit.
InterProiIPR000894. RuBisCO_sc_dom.
[Graphical view]
PfamiPF00101. RuBisCO_small. 1 hit.
[Graphical view]
SMARTiSM00961. RuBisCO_small. 1 hit.
[Graphical view]
SUPFAMiSSF55239. SSF55239. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiE6VIT8_RHOPX
AccessioniPrimary (citable) accession number: E6VIT8
Entry historyi
Integrated into UniProtKB/TrEMBL: March 8, 2011
Last sequence update: March 8, 2011
Last modified: September 7, 2016
This is version 31 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.