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Protein
Submitted name:

Ribulose-bisphosphate carboxylase

Gene

Rpdx1_3959

Organism
Rhodopseudomonas palustris (strain DX-1)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. ribulose-bisphosphate carboxylase activity Source: UniProtKB-EC
Complete GO annotation...

Keywords - Molecular functioni

LyaseImported

Enzyme and pathway databases

BioCyciRPAL652103:GHQR-4007-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Ribulose-bisphosphate carboxylaseImported (EC:4.1.1.39Imported)
Gene namesi
Ordered Locus Names:Rpdx1_3959Imported
OrganismiRhodopseudomonas palustris (strain DX-1)Imported
Taxonomic identifieri652103 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeRhodopseudomonas
ProteomesiUP000001402: Chromosome

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000141331.
KOiK01602.

Family and domain databases

Gene3Di3.30.190.10. 1 hit.
InterProiIPR000894. RuBisCO_sc_dom.
[Graphical view]
PfamiPF00101. RuBisCO_small. 1 hit.
[Graphical view]
SMARTiSM00961. RuBisCO_small. 1 hit.
[Graphical view]
SUPFAMiSSF55239. SSF55239. 1 hit.

Sequencei

Sequence statusi: Complete.

E6VIT8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRLTQGCFSF LPDLTDEQIA AQVQYALSKG WAVNLEFTDD PHPRNTYWEM
60 70 80 90 100
WGLPMFDLQD AAGVMMELNE CRKIYGDRYI RLSAFDSSHG WESVRLSFIV
110 120 130 140
NRPKDEPGFR LDRQESDGRN MRYTTRAYSA DKPEGRRYGG
Length:140
Mass (Da):16,315
Last modified:March 8, 2011 - v1
Checksum:i364E91081FC2E8EE
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002418 Genomic DNA. Translation: ADU45515.1.
RefSeqiWP_013503624.1. NC_014834.1.
YP_004110248.1. NC_014834.1.

Genome annotation databases

EnsemblBacteriaiADU45515; ADU45515; Rpdx1_3959.
GeneIDi10066192.
KEGGirpx:Rpdx1_3959.
PATRICi45348362. VBIRhoPal82507_4024.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002418 Genomic DNA. Translation: ADU45515.1.
RefSeqiWP_013503624.1. NC_014834.1.
YP_004110248.1. NC_014834.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADU45515; ADU45515; Rpdx1_3959.
GeneIDi10066192.
KEGGirpx:Rpdx1_3959.
PATRICi45348362. VBIRhoPal82507_4024.

Phylogenomic databases

HOGENOMiHOG000141331.
KOiK01602.

Enzyme and pathway databases

BioCyciRPAL652103:GHQR-4007-MONOMER.

Family and domain databases

Gene3Di3.30.190.10. 1 hit.
InterProiIPR000894. RuBisCO_sc_dom.
[Graphical view]
PfamiPF00101. RuBisCO_small. 1 hit.
[Graphical view]
SMARTiSM00961. RuBisCO_small. 1 hit.
[Graphical view]
SUPFAMiSSF55239. SSF55239. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Complete sequence of Rhodopseudomonas palustris DX-1."
    Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Misra M., Chertkov O., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Ovchinnikova G., Logan B., Oda Y., Harwood C., Woyke T.
    Submitted (DEC-2010) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DX-1Imported.

Entry informationi

Entry nameiE6VIT8_RHOPX
AccessioniPrimary (citable) accession number: E6VIT8
Entry historyi
Integrated into UniProtKB/TrEMBL: March 8, 2011
Last sequence update: March 8, 2011
Last modified: January 7, 2015
This is version 22 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.