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Protein

Phosphoenolpyruvate carboxylase

Gene

ppc

Organism
Rhodopseudomonas palustris (strain DX-1)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle.UniRule annotationSAAS annotation

Catalytic activityi

Phosphate + oxaloacetate = H2O + phosphoenolpyruvate + HCO3-.UniRule annotationSAAS annotation

Cofactori

Mg2+UniRule annotationSAAS annotation

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei164 – 1641UniRule annotation
Active sitei598 – 5981UniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

LyaseUniRule annotationSAAS annotation

Keywords - Biological processi

Carbon dioxide fixationUniRule annotationSAAS annotation

Keywords - Ligandi

MagnesiumUniRule annotationSAAS annotation, PyruvateImported

Enzyme and pathway databases

BioCyciRPAL652103:GHQR-3805-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Phosphoenolpyruvate carboxylaseUniRule annotationSAAS annotation (EC:4.1.1.31UniRule annotationSAAS annotation)
Short name:
PEPCUniRule annotation
Short name:
PEPCaseUniRule annotation
Gene namesi
Name:ppcUniRule annotation
Ordered Locus Names:Rpdx1_3760Imported
OrganismiRhodopseudomonas palustris (strain DX-1)Imported
Taxonomic identifieri652103 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeRhodopseudomonas
ProteomesiUP000001402 Componenti: Chromosome

Interactioni

Subunit structurei

Homotetramer.UniRule annotation

Protein-protein interaction databases

STRINGi652103.Rpdx1_3760.

Family & Domainsi

Sequence similaritiesi

Belongs to the PEPCase type 1 family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000238647.
KOiK01595.

Family and domain databases

HAMAPiMF_00595. PEPcase_type1.
InterProiIPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view]
PfamiPF00311. PEPcase. 1 hit.
[Graphical view]
PRINTSiPR00150. PEPCARBXLASE.
SUPFAMiSSF51621. SSF51621. 1 hit.
PROSITEiPS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

E6VGS8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSSLNLSAGA EPVSERPDDA AAIEAETRLR NDIRLLGRIL GDTVREQEGQ
60 70 80 90 100
SVFDLVENIR QTSIRFHRDD DKTARAELAA ILDGMSIPDT MRIVRAFSYF
110 120 130 140 150
SHLANIAEDQ NNIRQMRAGS TAGSAPRAGL LAKTLAHARQ EGISAAELRK
160 170 180 190 200
FFATALVSPV LTAHPTEVRR KSTMDREMQI ASLLDQRDRV QLTADEWADN
210 220 230 240 250
EERLRRAVET LWKTNLLRRT KLTVLDEVTN GLSFYDYTFL REVPRLHSAL
260 270 280 290 300
EDRLADAAKA EGVNSEGELA SFLRMGSWIG GDRDGNPFVT AEVLHGTLKL
310 320 330 340 350
QSTRVLRYYL EELHELGSEL SLASHLAGIT DTVKALAEIS PDTSPHRKYE
360 370 380 390 400
PYRLAVSGIY ARLAATALAL EVENLRAPVG EAAPYASAQD FKADLDAIHL
410 420 430 440 450
SLTQHNSGVI ARGRLRQLRR AIDCFGFHLA CLDMRQNSAV HERTVGELMD
460 470 480 490 500
AARPGTSYAV LDEEARIALL IAELRSTRPL TSMFVKYSDE TVGELSVFRE
510 520 530 540 550
AAKAHATYGA AAIPQCIISM TKGVSDLLEV AVLLKEVGLI DPSGRSAINV
560 570 580 590 600
VPLFETIEDL QACAKIMDRL LAIPEYRRLV DSRGSVQEVM LGYSDSNKDG
610 620 630 640 650
GFVTSGWELY KAEIGLIEIF EHHGVRLRLF HGRGGSVGRG GGPSYDAIVA
660 670 680 690 700
QPGGAVNGQI RITEQGEIIT SKYSNVEVGR NNLEILAAAT LEASLLQPKR
710 720 730 740 750
VAPHRDYLEA MEQLSALAFK AYRGLVYETD GFVDYFWAST VINEISTLNI
760 770 780 790 800
GSRPASRKKT RAIEDLRAIP WVFSWAQCRL MLPGWYGFGS AVSAWVTAHP
810 820 830 840 850
DKGIAFLQKM YQEWPFFRTL LSNMDMVLSK SSIGIASRYA ELVEDVDVRE
860 870 880 890 900
RIFGRIRAEW HSSIEYLFAI MQQDRLLQSN PLLERSIRHR FPYLDPLNHV
910 920 930
QVQLLREHRT HDPDEQVLRG VQLTINGISA GLRNSG
Length:936
Mass (Da):104,089
Last modified:March 8, 2011 - v1
Checksum:iF0D9A15A3D2F8EE8
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002418 Genomic DNA. Translation: ADU45325.1.
RefSeqiWP_013503437.1. NC_014834.1.
YP_004110058.1. NC_014834.1.

Genome annotation databases

EnsemblBacteriaiADU45325; ADU45325; Rpdx1_3760.
KEGGirpx:Rpdx1_3760.
PATRICi45347940. VBIRhoPal82507_3820.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002418 Genomic DNA. Translation: ADU45325.1.
RefSeqiWP_013503437.1. NC_014834.1.
YP_004110058.1. NC_014834.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi652103.Rpdx1_3760.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADU45325; ADU45325; Rpdx1_3760.
KEGGirpx:Rpdx1_3760.
PATRICi45347940. VBIRhoPal82507_3820.

Phylogenomic databases

HOGENOMiHOG000238647.
KOiK01595.

Enzyme and pathway databases

BioCyciRPAL652103:GHQR-3805-MONOMER.

Family and domain databases

HAMAPiMF_00595. PEPcase_type1.
InterProiIPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view]
PfamiPF00311. PEPcase. 1 hit.
[Graphical view]
PRINTSiPR00150. PEPCARBXLASE.
SUPFAMiSSF51621. SSF51621. 1 hit.
PROSITEiPS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Complete sequence of Rhodopseudomonas palustris DX-1."
    Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Misra M., Chertkov O., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Ovchinnikova G., Logan B., Oda Y., Harwood C., Woyke T.
    Submitted (DEC-2010) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DX-1Imported.

Entry informationi

Entry nameiE6VGS8_RHOPX
AccessioniPrimary (citable) accession number: E6VGS8
Entry historyi
Integrated into UniProtKB/TrEMBL: March 8, 2011
Last sequence update: March 8, 2011
Last modified: June 24, 2015
This is version 29 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.