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E6VFH9 (E6VFH9_RHOPX) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 18. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
ATP-dependent Clp protease ATP-binding subunit ClpX HAMAP-Rule MF_00175
Gene names
Name:clpX HAMAP-Rule MF_00175
Ordered Locus Names:Rpdx1_2480
OrganismRhodopseudomonas palustris (strain DX-1) [Complete proteome] [HAMAP] EMBL ADU44071.1
Taxonomic identifier652103 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Bradyrhizobiaceae › Rhodopseudomonas ›

Protein attributes

Sequence length424 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP By similarity. HAMAP-Rule MF_00175 SAAS SAAS010603

Subunit structure

Heterodimer of ClpP and ClpX By similarity. HAMAP-Rule MF_00175 SAAS SAAS010603

Sequence similarities

Belongs to the ClpX chaperone family. HAMAP-Rule MF_00175

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Zinc finger15 – 4026C4-type By similarity HAMAP-Rule MF_00175
Nucleotide binding118 – 1258ATP By similarity HAMAP-Rule MF_00175

Sequences

Sequence LengthMass (Da)Tools
E6VFH9 [UniParc].

Last modified March 8, 2011. Version 1.
Checksum: 01E731BB45FA4F6A

FASTA42446,594
        10         20         30         40         50         60 
MSKVGTSDSK NTLYCSFCGK SQHEVRKLIA GPTVFICDEC VELCMDIIRE ENKSSLVKSR 

        70         80         90        100        110        120 
DGIPTPKEIC KVLDDYVIGQ GHAKKVLSVA VHNHYKRLNH QTKHNDVELA KSNILLIGPT 

       130        140        150        160        170        180 
GSGKTLLAQT LARILDVPFT MADATTLTEA GYVGEDVENI ILKLLQAADY NVERAQRGIV 

       190        200        210        220        230        240 
YIDEIDKISR KSDNPSITRD VSGEGVQQAL LKIMEGTVAS VPPQGGRKHP QQEFLQVDTT 

       250        260        270        280        290        300 
NILFICGGAF AGLEKIISGR GRSTSIGFAA QVLAPEDRRT GEIFRHVEPE DLLKYGLIPE 

       310        320        330        340        350        360 
FVGRLPVVAT LEDLDETSLK KILTDPKNAL VKQYQRLFEM ENIELTFADE ALGAVARKAI 

       370        380        390        400        410        420 
ERKTGARGLR SILESILLET MFDLPGLEGV EEVVISREVV EGTARPLYIY ADRTDRAAET 


SASA

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References

[1]"Complete sequence of Rhodopseudomonas palustris DX-1."
Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Misra M., Chertkov O., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Ovchinnikova G., Logan B., Oda Y., Harwood C., Woyke T.
Submitted (DEC-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DX-1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP002418 Genomic DNA. Translation: ADU44071.1.
RefSeqYP_004108804.1. NC_014834.1.

3D structure databases

ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADU44071; ADU44071; Rpdx1_2480.
GeneID10064698.
KEGGrpx:Rpdx1_2480.
PATRIC45345300. VBIRhoPal82507_2523.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000010093.
KOK03544.

Enzyme and pathway databases

BioCycRPAL652103:GHQR-2512-MONOMER.

Family and domain databases

HAMAPMF_00175. ClpX.
InterProIPR003593. AAA+_ATPase.
IPR013093. ATPase_AAA-2.
IPR019489. Clp_ATPase_C.
IPR004487. Clp_protease_ATP-bd_su_ClpX.
IPR010603. Znf_CppX_C4.
[Graphical view]
PANTHERPTHR11262:SF4. PTHR11262:SF4. 1 hit.
PfamPF07724. AAA_2. 1 hit.
PF10431. ClpB_D2-small. 1 hit.
PF06689. zf-C4_ClpX. 1 hit.
[Graphical view]
SMARTSM00382. AAA. 1 hit.
SM01086. ClpB_D2-small. 1 hit.
SM00994. zf-C4_ClpX. 1 hit.
[Graphical view]
TIGRFAMsTIGR00382. clpX. 1 hit.
ProtoNetSearch...

Entry information

Entry nameE6VFH9_RHOPX
AccessionPrimary (citable) accession number: E6VFH9
Entry history
Integrated into UniProtKB/TrEMBL: March 8, 2011
Last sequence update: March 8, 2011
Last modified: May 1, 2013
This is version 18 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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