E6VCN9 (E6VCN9_RHOPX) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Carbamoyl-phosphate synthase L chain ATP-binding protein EMBL ADU43844.1

Gene names

Ordered Locus Names:

Rpdx1_2252

Organism

Rhodopseudomonas palustris (strain DX-1) [Complete proteome] [HAMAP] EMBL ADU43844.1

Taxonomic identifier

652103 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Bradyrhizobiaceae › Rhodopseudomonas › Rhodopseudomonas palustris

Protein attributes

Sequence length	671 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Ligand	ATP-binding EMBL ADU43844.1 Biotin RuleBase RU000428 Nucleotide-binding
Technical term	Complete proteome
Gene Ontology (GO)
Molecular_function	ATP binding Inferred from electronic annotation. Source: UniProtKB-KW biotin carboxylase activity Inferred from electronic annotation. Source: InterPro metal ion binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	E6VCN9 [UniParc]. Last modified March 8, 2011. Version 1. Checksum: 4882AECB44BD9114	FASTA	671	72,995
	10 20 30 40 50 60 MFKRILIANR GEIACRVIKT ARRMGIETVA VYSEADRDAL HVEMADEAVL IGPPAAAESY 70 80 90 100 110 120 LVIEKIVEAC KKTGAEAVHP GYGFLSEREA FPRALADAGI VFIGPNPGAI AAMGDKIESK 130 140 150 160 170 180 KAAAQAKVST VPGFLGVIED DKHAVKIADE IGYPVMIKAS AGGGGKGMRI AHSRAEVAEG 190 200 210 220 230 240 FNLAKAEAKA SFGDDRVFIE KFIVDPRHIE IQVLGDKHGN VIYLGERECS IQRRNQKVIE 250 260 270 280 290 300 EAPSPLLDEV TRRKMGEQAV ALAKAVNYDS AGTVEFVAGQ DKSFYFLEMN TRLQVEHPVT 310 320 330 340 350 360 EMVTGIDLVE QMIRVAAGEK LALAQKDITL KGWAVESRVY AEDPFRNFLP SIGRLVKYRP 370 380 390 400 410 420 PAESAASGIT VRNDTGVQEG GEISMFYDPM IAKLVTHGPS RAAAIEAQTH ALDAFYVDGI 430 440 450 460 470 480 RHNIPFLSAL MTHPRWREGN LSTGFIAEEF PQGFHPRVPE GEVARRIAAV GAAIDRVIGE 490 500 510 520 530 540 RKRKISGQMI GRAVIRERRR CVWLERSEVP LDVIREGEAF VVRFANPDGS LGQPHQLLSS 550 560 570 580 590 600 WMPGDPVWEG TIDGHPVAVQ VRAIPNGFKL AHHGYEVSVN VFTEREAAAA RWMKEADKAD 610 620 630 640 650 660 TGKKVLCPMP GLVVSIAVAE GQEVKAGETL AVIEAMKMQN VLRAERDGQI KKIHAAAGAT 670 LAVDAVIMEF A

References

[1]

"Complete sequence of Rhodopseudomonas palustris DX-1." Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Misra M., Chertkov O., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Ovchinnikova G., Logan B., Oda Y., Harwood C., Woyke T. Submitted (DEC-2010) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DX-1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002418 Genomic DNA. Translation: ADU43844.1.
RefSeq	YP_004108577.1. NC_014834.1.
3D structure databases
ProteinModelPortal	E6VCN9.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ADU43844; ADU43844; Rpdx1_2252.
GeneID	10064468.
KEGG	rpx:Rpdx1_2252.
PATRIC	45344802. VBIRhoPal82507_2278.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000008989.
KO	K01965.
Enzyme and pathway databases
BioCyc	RPAL652103:GHQR-2282-MONOMER.
Family and domain databases
Gene3D	3.30.1490.20. 1 hit. 3.30.470.20. 1 hit. 3.40.50.20. 1 hit.
InterPro	IPR011761. ATP-grasp. IPR013815. ATP_grasp_subdomain_1. IPR013816. ATP_grasp_subdomain_2. IPR001882. Biotin_BS. IPR011764. Biotin_carboxylation_dom. IPR005482. Biotin_COase_C. IPR000089. Biotin_lipoyl. IPR005481. CarbamoylP_synth_lsu_N. IPR005479. CbamoylP_synth_lsu-like_ATP-bd. IPR016185. PreATP-grasp_dom. IPR011054. Rudment_hybrid_motif. IPR011053. Single_hybrid_motif. [Graphical view]
Pfam	PF02785. Biotin_carb_C. 1 hit. PF00364. Biotin_lipoyl. 1 hit. PF00289. CPSase_L_chain. 1 hit. PF02786. CPSase_L_D2. 1 hit. [Graphical view]
SMART	SM00878. Biotin_carb_C. 1 hit. [Graphical view]
SUPFAM	SSF51230. Hybrid_motif. 1 hit. SSF52440. PreATP-grasp-like. 1 hit. SSF51246. Rudmnt_hyb_motif. 1 hit.
PROSITE	PS50975. ATP_GRASP. 1 hit. PS50979. BC. 1 hit. PS00188. BIOTIN. 1 hit. PS50968. BIOTINYL_LIPOYL. 1 hit. PS00866. CPSASE_1. 1 hit. PS00867. CPSASE_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

E6VCN9_RHOPX

Accession

Primary (citable) accession number: E6VCN9

Entry history

Integrated into UniProtKB/TrEMBL:	March 8, 2011
Last sequence update:	March 8, 2011
Last modified:	May 1, 2013
This is version 16 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)