E6VCK4 (E6VCK4_RHOPX) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
50S ribosomal protein L31 HAMAP-Rule MF_00501

Gene names

Name:	rpmE HAMAP-Rule MF_00501
Ordered Locus Names:	Rpdx1_1083

Organism

Rhodopseudomonas palustris (strain DX-1) [Complete proteome] [HAMAP] EMBL ADU42709.1

Taxonomic identifier

652103 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Bradyrhizobiaceae › Rhodopseudomonas › Rhodopseudomonas palustris

Protein attributes

Sequence length	75 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Binds the 23S rRNA By similarity. HAMAP-Rule MF_00501
Subunit structure	Part of the 50S ribosomal subunit By similarity. HAMAP-Rule MF_00501
Sequence similarities	Belongs to the ribosomal protein L31P family. Type A subfamily. HAMAP-Rule MF_00501

Ontologies

Keywords
Ligand	RNA-binding rRNA-binding HAMAP-Rule MF_00501
Molecular function	Ribonucleoprotein Ribosomal protein HAMAP-Rule MF_00501 EMBL ADU42709.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	translation Inferred from electronic annotation. Source: HAMAP
Cellular_component	ribosome Inferred from electronic annotation. Source: UniProtKB-KW
Molecular_function	rRNA binding Inferred from electronic annotation. Source: UniProtKB-KW structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	E6VCK4 [UniParc]. Last modified March 8, 2011. Version 1. Checksum: EE0D8EBB2D2C7345	FASTA	75	8,568
	10 20 30 40 50 60 MKTEIHPDYH TITVVMTDGT EYQTRSTWGK EGDKLNLDID PKSHPAWTGG TQQVLDRGGR 70 VSRFQKKFSG FLKKD

References

[1]

"Complete sequence of Rhodopseudomonas palustris DX-1." Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Misra M., Chertkov O., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Ovchinnikova G., Logan B., Oda Y., Harwood C., Woyke T. Submitted (DEC-2010) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DX-1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002418 Genomic DNA. Translation: ADU42709.1.
RefSeq	YP_004107442.1. NC_014834.1.
3D structure databases
ProteinModelPortal	E6VCK4.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ADU42709; ADU42709; Rpdx1_1083.
GeneID	10063282.
KEGG	rpx:Rpdx1_1083.
PATRIC	45342389. VBIRhoPal82507_1100.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000284895.
KO	K02909.
Enzyme and pathway databases
BioCyc	RPAL652103:GHQR-1096-MONOMER.
Family and domain databases
HAMAP	MF_00501. Ribosomal_L31_1.
InterPro	IPR002150. Ribosomal_L31. [Graphical view]
Pfam	PF01197. Ribosomal_L31. 1 hit. [Graphical view]
PRINTS	PR01249. RIBOSOMALL31.
TIGRFAMs	TIGR00105. L31. 1 hit.
PROSITE	PS01143. RIBOSOMAL_L31. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

E6VCK4_RHOPX

Accession

Primary (citable) accession number: E6VCK4

Entry history

Integrated into UniProtKB/TrEMBL:	March 8, 2011
Last sequence update:	March 8, 2011
Last modified:	May 1, 2013
This is version 14 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)