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Protein
Submitted name:

ATP dependent DNA ligase

Gene

Rpdx1_0962

Organism
Rhodopseudomonas palustris (strain DX-1)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionLigaseImported

Enzyme and pathway databases

BioCyciRPAL652103:G1GPO-963-MONOMER

Names & Taxonomyi

Protein namesi
Submitted name:
ATP dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:Rpdx1_0962Imported
OrganismiRhodopseudomonas palustris (strain DX-1)Imported
Taxonomic identifieri652103 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeRhodopseudomonas
Proteomesi
  • UP000001402 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi652103.Rpdx1_0962

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini361 – 498DNA_LIGASE_A3InterPro annotationAdd BLAST138

Phylogenomic databases

eggNOGiENOG4107QIM Bacteria
COG1793 LUCA
HOGENOMiHOG000036007
KOiK10747
OMAiWLFEESY
OrthoDBiPOG091H09SJ

Family and domain databases

InterProiView protein in InterPro
IPR026333 ATP_dep_DNA_lig_pp_1105_fam
IPR012309 DNA_ligase_ATP-dep_C
IPR012310 DNA_ligase_ATP-dep_cent
IPR016059 DNA_ligase_ATP-dep_CS
IPR012340 NA-bd_OB-fold
PfamiView protein in Pfam
PF04679 DNA_ligase_A_C, 1 hit
PF01068 DNA_ligase_A_M, 1 hit
SUPFAMiSSF50249 SSF50249, 1 hit
TIGRFAMsiTIGR04120 DNA_lig_bact, 1 hit
PROSITEiView protein in PROSITE
PS00697 DNA_LIGASE_A1, 1 hit
PS50160 DNA_LIGASE_A3, 1 hit

Sequencei

Sequence statusi: Complete.

E6VBL8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNRFAELLDR LGYEPGRNNK LRLITNYFRA VEDPDRGWAL AALTGALSFR
60 70 80 90 100
HAKPGLIRAL IAERTDPVLF GLSYDYVGDL SETVALMWPS PHAQRNSPPP
110 120 130 140 150
CGEGSGVGVH TGTPSSGRPH PNPLPQAGEG VRCASGEDVA SAEGSVNTGH
160 170 180 190 200
NNPPPPTLTE IVTTLHSLGK AELPAQLARW LDELDETGRW ALLKLVTGAL
210 220 230 240 250
RIGVSARLAK TAAAALGNKD PHDVELVWPG IEPPYDELFA WLEGRGPQPA
260 270 280 290 300
SRDPAPFRPV MLAHAVDDTD FAGMDPADYI AEWKWDGIRV QAVSGLNEHG
310 320 330 340 350
DCVVRLYSRS GEDITMSFPD LLPSLRLPGA IDGELLVLRD KRVQSFNVLQ
360 370 380 390 400
QRLNRKSVTP KLTKDYPIHL RAYDLLGDGD EDLRTLPFAE RRTRLETLIA
410 420 430 440 450
RLGDPKVDLS PIVAFDDWDG LRAARRDPAS AGAGLDADAV EGVMLKRRDA
460 470 480 490 500
PYLPGRPKGQ WWKWKHDPHI IDAVLMYAQR GHGKRSSYYS DYTFGVWTEG
510 520 530 540 550
DGGDQLVPVG KAYFGFTDEE LLQIDRFVRR NTTEKFGPVR HVVHEPDKGL
560 570 580 590 600
VLEVAFEGLQ RSPRHKSGVA MRFPRISRLR WDKPPKDADR LETLERMLKA
610
ESAKPHPAGA RGH
Length:613
Mass (Da):67,838
Last modified:March 8, 2011 - v1
Checksum:i06F73C0CD090A228
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002418 Genomic DNA Translation: ADU42590.1
RefSeqiWP_013500749.1, NC_014834.1

Genome annotation databases

EnsemblBacteriaiADU42590; ADU42590; Rpdx1_0962
KEGGirpx:Rpdx1_0962

Similar proteinsi

Entry informationi

Entry nameiE6VBL8_RHOPX
AccessioniPrimary (citable) accession number: E6VBL8
Entry historyiIntegrated into UniProtKB/TrEMBL: March 8, 2011
Last sequence update: March 8, 2011
Last modified: March 28, 2018
This is version 38 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

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