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Protein
Submitted name:

Aminotransferase class I and II

Gene

Varpa_2092

Organism
Variovorax paradoxus (strain EPS)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

AminotransferaseImported, Transferase

Enzyme and pathway databases

BioCyciVPAR595537:GHGJ-2112-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Aminotransferase class I and IIImported
Gene namesi
Ordered Locus Names:Varpa_2092Imported
OrganismiVariovorax paradoxus (strain EPS)Imported
Taxonomic identifieri595537 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesComamonadaceaeVariovorax
ProteomesiUP000008917 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi595537.Varpa_2092.

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000223042.
KOiK14260.
OMAiRIVFLPH.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR004839. Aminotransferase_I/II.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamiPF00155. Aminotran_1_2. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.

Sequencei

Sequence statusi: Complete.

E6VAU5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKQLKKSAKL ANVLYDIRGP IMDAAKQMED DGQKIIKLNI GNLAVFGFDA
60 70 80 90 100
PEEIQQDMIR NLPNSAGYSD SKGVFAARKA VMHETQKQGI AGVTLDDIYL
110 120 130 140 150
GNGASELIAM STNALLDDGD ELLLPAPDYP LWTASTSLSG GTPVHYLCDE
160 170 180 190 200
ANGWMPNLAD IRAKITPRTK GIVVINPNNP TGALYSDDLL KSIVAIAREH
210 220 230 240 250
GLVIFADEVY DKVLYDGVKH TAIASLSTDV LTLTFNSLSK SYRSCGYRAG
260 270 280 290 300
WVVVSGDKRA AQDYIEGLNM LSNMRLCANV PGQWAIQTAL GGYQSINDLV
310 320 330 340 350
CDGGRLRRQR DLAYELITAI PGVTCVKPSA ALYMFPRLDP EVYPITDDRQ
360 370 380 390 400
FFLELLKETR VMLVQGTGFN WATPDHFRIV FLPHEDDLRE AINRIAKFLE
410
QYRLRRKTAS
Length:410
Mass (Da):45,353
Last modified:March 8, 2011 - v1
Checksum:i76E7829B3E77A4A1
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002417 Genomic DNA. Translation: ADU36299.1.
RefSeqiWP_013540534.1. NC_014931.1.

Genome annotation databases

EnsemblBacteriaiADU36299; ADU36299; Varpa_2092.
KEGGivpe:Varpa_2092.
PATRICi45390182. VBIVarPar156291_2135.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002417 Genomic DNA. Translation: ADU36299.1.
RefSeqiWP_013540534.1. NC_014931.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi595537.Varpa_2092.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADU36299; ADU36299; Varpa_2092.
KEGGivpe:Varpa_2092.
PATRICi45390182. VBIVarPar156291_2135.

Phylogenomic databases

HOGENOMiHOG000223042.
KOiK14260.
OMAiRIVFLPH.

Enzyme and pathway databases

BioCyciVPAR595537:GHGJ-2112-MONOMER.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR004839. Aminotransferase_I/II.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamiPF00155. Aminotran_1_2. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Complete sequence of Variovorax paradoxus EPS."
    US DOE Joint Genome Institute
    Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Teshima H., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Ovchinnikova G., Orwin P., Han J.-I.G., Woyke T.
    Submitted (DEC-2010) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: EPSImported.

Entry informationi

Entry nameiE6VAU5_VARPE
AccessioniPrimary (citable) accession number: E6VAU5
Entry historyi
Integrated into UniProtKB/TrEMBL: March 8, 2011
Last sequence update: March 8, 2011
Last modified: July 22, 2015
This is version 25 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.