E6V8A0 (E6V8A0_VARPE) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
6-phosphogluconate dehydratase EMBL ADU38452.1
EC=4.2.1.12 EMBL ADU38452.1

Gene names

Ordered Locus Names:

Varpa_4283 EMBL ADU38452.1

Organism

Variovorax paradoxus (strain EPS) [Complete proteome] [HAMAP] EMBL ADU38452.1

Taxonomic identifier

595537 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Comamonadaceae › Variovorax › Variovorax paradoxus

Protein attributes

Sequence length	611 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Lyase SAAS SAAS000581 EMBL ADU38452.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	Entner-Doudoroff pathway Inferred from electronic annotation. Source: InterPro
Molecular_function	phosphogluconate dehydratase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	E6V8A0 [UniParc]. Last modified March 8, 2011. Version 1. Checksum: 7E073AF0FFDA369C	FASTA	611	64,300
	10 20 30 40 50 60 MSSTHPTVRD VTDRIRERSH GTRSAYLARL AEIRGRDRGS ERMGCANVAH AVAGIPANDK 70 80 90 100 110 120 FKVVTERAPN LGIVTAYNDM LSAHAPYQGY PDIIKQEARR LGATAQVAGG VPAMCDGVTQ 130 140 150 160 170 180 GTPGMELSLF SRDVIAMSTA IALTHDMFDG ALMLGVCDKI VPGLLIGALH FGHLPTVFVP 190 200 210 220 230 240 AGPMPSGLSN NAKSKVREQA AQGLVGRQGL LDAEMAAYHT VGTCTFYGTA NSNQMLLEAM 250 260 270 280 290 300 GLHVPGTAFI QPGDAMRETL TREAVRTVLG KAGETAFNCP PIGEMVDERC IVNAMAALLA 310 320 330 340 350 360 TGGSTNHLIH WVAVARAAGI VIDWDDFSKL SDIIPLLTRV YPNGSADVNE FQAAGGPGFV 370 380 390 400 410 420 IGELVDAGLM HADVLTVRAG GIREFANIPT LADSGEQRLS WTPAAPSKND AVARTVAEPF 430 440 450 460 470 480 SATGGLKLLS GNLGRSVIKV SSVPDDRHVI EAPARVFDSQ AALHKAFTAG ELERDVVCVV 490 500 510 520 530 540 RWQGPQANGM PELHKLTPPL SVLQGKGFRV ALVTDGRMSG ASGKIPAAIH VSPEAAAGGP 550 560 570 580 590 600 LAKVRDGDVI RLDAVAGTLA VLLPEDEWAA RETATLPEAQ RIADGHGLGR ELFAGMRRNA 610 LTAEEGACSW L

References

[1]

"Complete sequence of Variovorax paradoxus EPS." US DOE Joint Genome Institute Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Teshima H., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Ovchinnikova G., Orwin P., Han J.-I.G., Woyke T. Submitted (DEC-2010) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: EPS EMBL ADU38452.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002417 Genomic DNA. Translation: ADU38452.1.
RefSeq	YP_004156563.1. NC_014931.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ADU38452; ADU38452; Varpa_4283.
GeneID	10131131.
KEGG	vpe:Varpa_4283.
PATRIC	45394625. VBIVarPar156291_4329.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000173157.
KO	K01690.
OMA	HQPFETY.
Family and domain databases
InterPro	IPR004786. 6-phosphgluc_deHydtase. IPR015928. Aconitase/3IPM_dehydase_swvl. IPR000581. DiOHA_6PGluconate_deHydtase. IPR020558. DiOHA_6PGluconate_deHydtase_CS. [Graphical view]
PANTHER	PTHR21000. PTHR21000. 1 hit.
Pfam	PF00920. ILVD_EDD. 1 hit. [Graphical view]
SUPFAM	SSF52016. Aconitase/3IPM_dehydase_swvl. 1 hit.
TIGRFAMs	TIGR01196. edd. 1 hit.
PROSITE	PS00886. ILVD_EDD_1. 1 hit. PS00887. ILVD_EDD_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

E6V8A0_VARPE

Accession

Primary (citable) accession number: E6V8A0

Entry history

Integrated into UniProtKB/TrEMBL:	March 8, 2011
Last sequence update:	March 8, 2011
Last modified:	April 3, 2013
This is version 14 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)