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E6V301

- E6V301_VARPE

UniProt

E6V301 - E6V301_VARPE

Protein
Submitted name:

Ribulose-bisphosphate carboxylase

Gene

Varpa_3886

Organism
Variovorax paradoxus (strain EPS)
Status
Unreviewed - Annotation score: 1 out of 5- Protein inferred from homologyi
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    • History
      Entry version 19 (01 Oct 2014)
      Sequence version 1 (08 Mar 2011)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. magnesium ion binding Source: InterPro
    2. ribulose-bisphosphate carboxylase activity Source: UniProtKB-EC

    GO - Biological processi

    1. carbon fixation Source: InterPro

    Keywords - Molecular functioni

    LyaseImported

    Enzyme and pathway databases

    BioCyciVPAR595537:GHGJ-3923-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Ribulose-bisphosphate carboxylaseImported (EC:4.1.1.39Imported)
    Gene namesi
    Ordered Locus Names:Varpa_3886Imported
    OrganismiVariovorax paradoxus (strain EPS)Imported
    Taxonomic identifieri595537 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesComamonadaceaeVariovorax
    ProteomesiUP000008917: Chromosome

    Structurei

    3D structure databases

    ProteinModelPortaliE6V301.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the RuBisCO large chain family.UniRule annotation

    Phylogenomic databases

    HOGENOMiHOG000230831.
    KOiK01601.
    OMAiFECAGDP.

    Family and domain databases

    Gene3Di3.20.20.110. 1 hit.
    3.30.70.150. 1 hit.
    InterProiIPR020878. RuBisCo_large_chain_AS.
    IPR000685. RuBisCO_lsu_C.
    IPR017443. RuBisCO_lsu_fd_N.
    [Graphical view]
    PfamiPF00016. RuBisCO_large. 1 hit.
    [Graphical view]
    SUPFAMiSSF51649. SSF51649. 1 hit.
    SSF54966. SSF54966. 1 hit.
    PROSITEiPS00157. RUBISCO_LARGE. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    E6V301-1 [UniParc]FASTAAdd to Basket

    « Hide

    MAAERIRARY LIETPVDPAA VAEVMAGEQS CGTFTRVEGE TDALRERARA    50
    TVEAITELEP APSPSLPNAL LERKGTRGPW RRAHVDISFP VANIGANLPT 100
    LAATVSGNLY DLGEVTGLRL ESLHVPAAYR AQFEMPRIGI AGTRRATGVA 150
    SGALVGTIIK PNVGLSAAET ATLVARLCAA GVDFIKDDEV CADPAHAPLA 200
    ERVPAVMAVV RAHQERTGKH VMVAFNITDE TDAMKRHADL VEREGGSCVM 250
    ASLNWCGHSG IQTLRRHTGL ALHGHRNGYG ALSRHPLLGI SFQAYQTLWR 300
    LAGVDHMHVH GLQGKFSQPD SEVIESARDC FTPLTDAADD RVMPAFSSGQ 350
    WAGTVPATWA AIGSDDLLFM AGGGILAHPD GAEAGVTSIR QAWSAARAGT 400
    ALQDAAKHAS ELARALAFFG KP 422
    Length:422
    Mass (Da):44,716
    Last modified:March 8, 2011 - v1
    Checksum:iE2792261A02DF45F
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002417 Genomic DNA. Translation: ADU38067.1.
    RefSeqiYP_004156178.1. NC_014931.1.

    Genome annotation databases

    EnsemblBacteriaiADU38067; ADU38067; Varpa_3886.
    GeneIDi10130731.
    KEGGivpe:Varpa_3886.
    PATRICi45393818. VBIVarPar156291_3931.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002417 Genomic DNA. Translation: ADU38067.1 .
    RefSeqi YP_004156178.1. NC_014931.1.

    3D structure databases

    ProteinModelPortali E6V301.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ADU38067 ; ADU38067 ; Varpa_3886 .
    GeneIDi 10130731.
    KEGGi vpe:Varpa_3886.
    PATRICi 45393818. VBIVarPar156291_3931.

    Phylogenomic databases

    HOGENOMi HOG000230831.
    KOi K01601.
    OMAi FECAGDP.

    Enzyme and pathway databases

    BioCyci VPAR595537:GHGJ-3923-MONOMER.

    Family and domain databases

    Gene3Di 3.20.20.110. 1 hit.
    3.30.70.150. 1 hit.
    InterProi IPR020878. RuBisCo_large_chain_AS.
    IPR000685. RuBisCO_lsu_C.
    IPR017443. RuBisCO_lsu_fd_N.
    [Graphical view ]
    Pfami PF00016. RuBisCO_large. 1 hit.
    [Graphical view ]
    SUPFAMi SSF51649. SSF51649. 1 hit.
    SSF54966. SSF54966. 1 hit.
    PROSITEi PS00157. RUBISCO_LARGE. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Complete sequence of Variovorax paradoxus EPS."
      US DOE Joint Genome Institute
      Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Teshima H., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Ovchinnikova G., Orwin P., Han J.-I.G., Woyke T.
      Submitted (DEC-2010) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: EPSImported.

    Entry informationi

    Entry nameiE6V301_VARPE
    AccessioniPrimary (citable) accession number: E6V301
    Entry historyi
    Integrated into UniProtKB/TrEMBL: March 8, 2011
    Last sequence update: March 8, 2011
    Last modified: October 1, 2014
    This is version 19 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3