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E6V2K2

- E6V2K2_VARPE

UniProt

E6V2K2 - E6V2K2_VARPE

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Protein
Phosphoenolpyruvate carboxylase
Gene
ppc, Varpa_1512
Organism
Variovorax paradoxus (strain EPS)
Status
Unreviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle By similarity.UniRule annotation

Catalytic activityi

Phosphate + oxaloacetate = H2O + phosphoenolpyruvate + HCO3-.UniRule annotationSAAS annotations

Cofactori

Magnesium By similarity.UniRule annotationSAAS annotations

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei154 – 1541 By similarityUniRule annotation
Active sitei599 – 5991 By similarityUniRule annotation

GO - Molecular functioni

  1. magnesium ion binding Source: UniProtKB-HAMAP
  2. phosphoenolpyruvate carboxylase activity Source: UniProtKB-HAMAP

GO - Biological processi

  1. carbon fixation Source: UniProtKB-HAMAP
  2. oxaloacetate metabolic process Source: UniProtKB-HAMAP
  3. tricarboxylic acid cycle Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LyaseUniRule annotationSAAS annotationsImported

Keywords - Biological processi

Carbon dioxide fixationUniRule annotationSAAS annotations

Keywords - Ligandi

MagnesiumUniRule annotationSAAS annotations, PyruvateImported

Enzyme and pathway databases

BioCyciVPAR595537:GHGJ-1525-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Phosphoenolpyruvate carboxylaseUniRule annotation (EC:4.1.1.31UniRule annotation)
Short name:
PEPCUniRule annotation
Short name:
PEPCaseUniRule annotation
Gene namesi
Name:ppcUniRule annotation
Ordered Locus Names:Varpa_1512Imported
OrganismiVariovorax paradoxus (strain EPS)Imported
Taxonomic identifieri595537 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesComamonadaceaeVariovorax
ProteomesiUP000008917: Chromosome

Interactioni

Subunit structurei

Homotetramer By similarity.UniRule annotation

Family & Domainsi

Sequence similaritiesi

Belongs to the PEPCase type 1 family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000238647.
KOiK01595.
OMAiELSTISC.

Family and domain databases

HAMAPiMF_00595. PEPcase_type1.
InterProiIPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view]
PfamiPF00311. PEPcase. 1 hit.
[Graphical view]
PRINTSiPR00150. PEPCARBXLASE.
SUPFAMiSSF51621. SSF51621. 1 hit.
PROSITEiPS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

E6V2K2-1 [UniParc]FASTAAdd to Basket

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MKASKTPALP KRRQAEDQPL IDDIRLLGRI LGDVIREQEG DETYALVEKI    50
RTLSVAFRRD ADQAADRALK NLLKGLSAAE TVRVIRAFTY FSHLANLAED 100
RHQIRRRTEA DREGVLADGD LQTALARIRK AGVKPDEIVA SLAHSYVSPV 150
LTAHPTEVQR KSILDAERAI ALLLTTRDEI KLRQSAYASG KDALSPIELA 200
DNETQMRTRV TQIWQTRLLR FSKLTVADEI ENALSYYEAT FLREIPRVYA 250
DLEKALTQGG HTPSVAPFLR MGQWIGGDRD GNPNVTAETL EYALGRQAEL 300
ALRLYLTEVH YLGGELSLSA TLVDVSVEMQ ALAERSPDTS EHRKDEPYRR 350
ALTGVYARLA ATLRELTGGE AARHAVAPQN PYAKAEEFLA DLRTVEESLG 400
EKHGSVLAAP RLRPLIRAVE VFGFHLATVD LRQSSDKHEA VIAELLATAR 450
IEPSYASLAE EAKQTLLLKL LDDARPLRVP DADYSPLAKS ELAIFAAART 500
ARARYGAAAI RHYIISHTET VSDLLEALLL QKEVGLLRGA MATNAVCDLI 550
VVPLFETIED LRNAAPIVRA FYALPNIQAL IERSGGEQDV MLGYSDSNKD 600
GGIFTSNWEL YRAGIALVSL FDELNKKKAN PIRLRMFHGR GGTVGRGGGP 650
SYQAILAQPP GTVRGQIRLT EQGEVIGSKY ANREIGRRNL ETLVAATLEA 700
TLLPQGKSAP ATFLSAASEL SAASMAAYRK LVYETPGFGD YFFGSTPIRE 750
IAELNIGSRP ASRNPSHKID DLRAVPWSFS WGQCRLTIPG WFGFGAGVEQ 800
FLASAGNAAG KKERVALLQR MYAQWPFFRT LLSNMDMVLA KSDLALASRY 850
AELVTDRKLR QKVFSMIDAE WHRTSDALTL ITGAKQRLEG NAEMQRSVRH 900
RFPYIDPLHH LQVELMRRYR AGDGGERLQR GIHISINGVA AGLRNTG 947
Length:947
Mass (Da):104,659
Last modified:March 8, 2011 - v1
Checksum:i75A6A0E59497708E
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002417 Genomic DNA. Translation: ADU35723.1.
RefSeqiWP_013539966.1. NC_014931.1.
YP_004153834.1. NC_014931.1.

Genome annotation databases

EnsemblBacteriaiADU35723; ADU35723; Varpa_1512.
GeneIDi10128333.
KEGGivpe:Varpa_1512.
PATRICi45389002. VBIVarPar156291_1554.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002417 Genomic DNA. Translation: ADU35723.1 .
RefSeqi WP_013539966.1. NC_014931.1.
YP_004153834.1. NC_014931.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ADU35723 ; ADU35723 ; Varpa_1512 .
GeneIDi 10128333.
KEGGi vpe:Varpa_1512.
PATRICi 45389002. VBIVarPar156291_1554.

Phylogenomic databases

HOGENOMi HOG000238647.
KOi K01595.
OMAi ELSTISC.

Enzyme and pathway databases

BioCyci VPAR595537:GHGJ-1525-MONOMER.

Family and domain databases

HAMAPi MF_00595. PEPcase_type1.
InterProi IPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view ]
Pfami PF00311. PEPcase. 1 hit.
[Graphical view ]
PRINTSi PR00150. PEPCARBXLASE.
SUPFAMi SSF51621. SSF51621. 1 hit.
PROSITEi PS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Complete sequence of Variovorax paradoxus EPS."
    US DOE Joint Genome Institute
    Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Teshima H., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Ovchinnikova G., Orwin P., Han J.-I.G., Woyke T.
    Submitted (DEC-2010) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: EPS.

Entry informationi

Entry nameiE6V2K2_VARPE
AccessioniPrimary (citable) accession number: E6V2K2
Entry historyi
Integrated into UniProtKB/TrEMBL: March 8, 2011
Last sequence update: March 8, 2011
Last modified: September 3, 2014
This is version 22 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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