E6V0M1 (E6V0M1_VARPE) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Superoxide dismutase RuleBase RU000414
EC=1.15.1.1 RuleBase RU000414

Gene names

Ordered Locus Names:

Varpa_2522 EMBL ADU36722.1

Organism

Variovorax paradoxus (strain EPS) [Complete proteome] [HAMAP] EMBL ADU36722.1

Taxonomic identifier

595537 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Comamonadaceae › Variovorax › Variovorax paradoxus

Protein attributes

Sequence length	214 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Destroys radicals which are normally produced within the cells and which are toxic to biological systems By similarity. RuleBase RU000414
Catalytic activity	2 superoxide + 2 H+ = O2 + H2O2. RuleBase RU000414
Sequence similarities	Belongs to the iron/manganese superoxide dismutase family. RuleBase RU004477

Ontologies

Keywords
Molecular function	Oxidoreductase RuleBase RU000414
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	superoxide metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	metal ion binding Inferred from electronic annotation. Source: InterPro superoxide dismutase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	E6V0M1 [UniParc]. Last modified March 8, 2011. Version 1. Checksum: 7F0AF452A8E062D6	FASTA	214	23,238
	10 20 30 40 50 60 MLYTLPALPY AFDALEPHLD AQTMEIHHGK HHQTYVNNLN AAVKDTPHEG TPVEQLIVDI 70 80 90 100 110 120 EQLPEALRAP VRNNGGGHAN HSLFWTVMAP VGQGGGGTPT GDLAKAIDAD LGGFDVFREA 130 140 150 160 170 180 FTKAALTRFG SGWAWLSVAK GGKLAVESSG NQDSPLMRGI GSGNTPILGL DVWEHAYYLK 190 200 210 YQNRRPEYIA AFYNVVNWAE VARRHAAALA AIRD

References

[1]

"Complete sequence of Variovorax paradoxus EPS." US DOE Joint Genome Institute Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Teshima H., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Ovchinnikova G., Orwin P., Han J.-I.G., Woyke T. Submitted (DEC-2010) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: EPS EMBL ADU36722.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002417 Genomic DNA. Translation: ADU36722.1.
RefSeq	YP_004154833.1. NC_014931.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ADU36722; ADU36722; Varpa_2522.
GeneID	10129354.
KEGG	vpe:Varpa_2522.
PATRIC	45391072. VBIVarPar156291_2575.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000013583.
KO	K04564.
OMA	WTVMAPN.
Enzyme and pathway databases
BioCyc	VPAR595537:GHGJ-2546-MONOMER.
Family and domain databases
InterPro	IPR001189. Mn/Fe_SOD. IPR019833. Mn/Fe_SOD_BS. IPR019832. Mn/Fe_SOD_C. IPR019831. Mn/Fe_SOD_N. [Graphical view]
PANTHER	PTHR11404. PTHR11404. 1 hit.
Pfam	PF02777. Sod_Fe_C. 1 hit. PF00081. Sod_Fe_N. 1 hit. [Graphical view]
PIRSF	PIRSF000349. SODismutase. 1 hit.
PRINTS	PR01703. MNSODISMTASE.
SUPFAM	SSF46609. SODismutase. 1 hit. SSF54719. SODismutase. 1 hit.
PROSITE	PS00088. SOD_MN. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

E6V0M1_VARPE

Accession

Primary (citable) accession number: E6V0M1

Entry history

Integrated into UniProtKB/TrEMBL:	March 8, 2011
Last sequence update:	March 8, 2011
Last modified:	May 29, 2013
This is version 17 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)