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E6V0M1 (E6V0M1_VARPE) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 21. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Superoxide dismutase RuleBase RU000414

EC=1.15.1.1 RuleBase RU000414
Gene names
Ordered Locus Names:Varpa_2522 EMBL ADU36722.1
OrganismVariovorax paradoxus (strain EPS) [Complete proteome] [HAMAP] EMBL ADU36722.1
Taxonomic identifier595537 [NCBI]
Taxonomic lineageBacteriaProteobacteriaBetaproteobacteriaBurkholderialesComamonadaceaeVariovorax

Protein attributes

Sequence length214 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Destroys radicals which are normally produced within the cells and which are toxic to biological systems By similarity.

Catalytic activity

2 superoxide + 2 H+ = O2 + H2O2.

Sequence similarities

Belongs to the iron/manganese superoxide dismutase family. RuleBase RU004477

Ontologies

Keywords
   Molecular functionOxidoreductase RuleBase RU000414
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular_functionmetal ion binding

Inferred from electronic annotation. Source: InterPro

superoxide dismutase activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
E6V0M1 [UniParc].

Last modified March 8, 2011. Version 1.
Checksum: 7F0AF452A8E062D6

FASTA21423,238
        10         20         30         40         50         60 
MLYTLPALPY AFDALEPHLD AQTMEIHHGK HHQTYVNNLN AAVKDTPHEG TPVEQLIVDI 

        70         80         90        100        110        120 
EQLPEALRAP VRNNGGGHAN HSLFWTVMAP VGQGGGGTPT GDLAKAIDAD LGGFDVFREA 

       130        140        150        160        170        180 
FTKAALTRFG SGWAWLSVAK GGKLAVESSG NQDSPLMRGI GSGNTPILGL DVWEHAYYLK 

       190        200        210 
YQNRRPEYIA AFYNVVNWAE VARRHAAALA AIRD 

« Hide

References

[1]"Complete sequence of Variovorax paradoxus EPS."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Teshima H., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Ovchinnikova G., Orwin P., Han J.-I.G., Woyke T.
Submitted (DEC-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: EPS.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002417 Genomic DNA. Translation: ADU36722.1.
RefSeqYP_004154833.1. NC_014931.1.

3D structure databases

ProteinModelPortalE6V0M1.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADU36722; ADU36722; Varpa_2522.
GeneID10129354.
KEGGvpe:Varpa_2522.
PATRIC45391072. VBIVarPar156291_2575.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000013583.
KOK04564.
OMAPLPYDYN.

Enzyme and pathway databases

BioCycVPAR595537:GHGJ-2546-MONOMER.

Family and domain databases

InterProIPR001189. Mn/Fe_SOD.
IPR019833. Mn/Fe_SOD_BS.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
[Graphical view]
PANTHERPTHR11404. PTHR11404. 1 hit.
PfamPF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
[Graphical view]
PIRSFPIRSF000349. SODismutase. 1 hit.
PRINTSPR01703. MNSODISMTASE.
SUPFAMSSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.
PROSITEPS00088. SOD_MN. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameE6V0M1_VARPE
AccessionPrimary (citable) accession number: E6V0M1
Entry history
Integrated into UniProtKB/TrEMBL: March 8, 2011
Last sequence update: March 8, 2011
Last modified: July 9, 2014
This is version 21 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)