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E6V0M1

- E6V0M1_VARPE

UniProt

E6V0M1 - E6V0M1_VARPE

Protein

Superoxide dismutase

Gene

Varpa_2522

Organism
Variovorax paradoxus (strain EPS)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 23 (01 Oct 2014)
      Sequence version 1 (08 Mar 2011)
      Previous versions | rss
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    Functioni

    Destroys radicals which are normally produced within the cells and which are toxic to biological systems.UniRule annotation
    Destroys radicals which are normally produced within the cells and which are toxic to biological systems By similarity.

    Catalytic activityi

    2 superoxide + 2 H+ = O2 + H2O2.UniRule annotation

    GO - Molecular functioni

    1. metal ion binding Source: InterPro
    2. superoxide dismutase activity Source: UniProtKB-EC

    Keywords - Molecular functioni

    OxidoreductaseUniRule annotation

    Enzyme and pathway databases

    BioCyciVPAR595537:GHGJ-2546-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Superoxide dismutaseUniRule annotation (EC:1.15.1.1UniRule annotation)
    Gene namesi
    Ordered Locus Names:Varpa_2522Imported
    OrganismiVariovorax paradoxus (strain EPS)Imported
    Taxonomic identifieri595537 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesComamonadaceaeVariovorax
    ProteomesiUP000008917: Chromosome

    Structurei

    3D structure databases

    ProteinModelPortaliE6V0M1.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the iron/manganese superoxide dismutase family.UniRule annotation

    Phylogenomic databases

    HOGENOMiHOG000013583.
    KOiK04564.
    OMAiPLPYDYN.

    Family and domain databases

    InterProiIPR001189. Mn/Fe_SOD.
    IPR019833. Mn/Fe_SOD_BS.
    IPR019832. Mn/Fe_SOD_C.
    IPR019831. Mn/Fe_SOD_N.
    [Graphical view]
    PANTHERiPTHR11404. PTHR11404. 1 hit.
    PfamiPF02777. Sod_Fe_C. 1 hit.
    PF00081. Sod_Fe_N. 1 hit.
    [Graphical view]
    PIRSFiPIRSF000349. SODismutase. 1 hit.
    PRINTSiPR01703. MNSODISMTASE.
    SUPFAMiSSF46609. SSF46609. 1 hit.
    SSF54719. SSF54719. 1 hit.
    PROSITEiPS00088. SOD_MN. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    E6V0M1-1 [UniParc]FASTAAdd to Basket

    « Hide

    MLYTLPALPY AFDALEPHLD AQTMEIHHGK HHQTYVNNLN AAVKDTPHEG    50
    TPVEQLIVDI EQLPEALRAP VRNNGGGHAN HSLFWTVMAP VGQGGGGTPT 100
    GDLAKAIDAD LGGFDVFREA FTKAALTRFG SGWAWLSVAK GGKLAVESSG 150
    NQDSPLMRGI GSGNTPILGL DVWEHAYYLK YQNRRPEYIA AFYNVVNWAE 200
    VARRHAAALA AIRD 214
    Length:214
    Mass (Da):23,238
    Last modified:March 8, 2011 - v1
    Checksum:i7F0AF452A8E062D6
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002417 Genomic DNA. Translation: ADU36722.1.
    RefSeqiWP_013540953.1. NC_014931.1.
    YP_004154833.1. NC_014931.1.

    Genome annotation databases

    EnsemblBacteriaiADU36722; ADU36722; Varpa_2522.
    GeneIDi10129354.
    KEGGivpe:Varpa_2522.
    PATRICi45391072. VBIVarPar156291_2575.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002417 Genomic DNA. Translation: ADU36722.1 .
    RefSeqi WP_013540953.1. NC_014931.1.
    YP_004154833.1. NC_014931.1.

    3D structure databases

    ProteinModelPortali E6V0M1.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ADU36722 ; ADU36722 ; Varpa_2522 .
    GeneIDi 10129354.
    KEGGi vpe:Varpa_2522.
    PATRICi 45391072. VBIVarPar156291_2575.

    Phylogenomic databases

    HOGENOMi HOG000013583.
    KOi K04564.
    OMAi PLPYDYN.

    Enzyme and pathway databases

    BioCyci VPAR595537:GHGJ-2546-MONOMER.

    Family and domain databases

    InterProi IPR001189. Mn/Fe_SOD.
    IPR019833. Mn/Fe_SOD_BS.
    IPR019832. Mn/Fe_SOD_C.
    IPR019831. Mn/Fe_SOD_N.
    [Graphical view ]
    PANTHERi PTHR11404. PTHR11404. 1 hit.
    Pfami PF02777. Sod_Fe_C. 1 hit.
    PF00081. Sod_Fe_N. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF000349. SODismutase. 1 hit.
    PRINTSi PR01703. MNSODISMTASE.
    SUPFAMi SSF46609. SSF46609. 1 hit.
    SSF54719. SSF54719. 1 hit.
    PROSITEi PS00088. SOD_MN. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Complete sequence of Variovorax paradoxus EPS."
      US DOE Joint Genome Institute
      Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Teshima H., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Ovchinnikova G., Orwin P., Han J.-I.G., Woyke T.
      Submitted (DEC-2010) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: EPSImported.

    Entry informationi

    Entry nameiE6V0M1_VARPE
    AccessioniPrimary (citable) accession number: E6V0M1
    Entry historyi
    Integrated into UniProtKB/TrEMBL: March 8, 2011
    Last sequence update: March 8, 2011
    Last modified: October 1, 2014
    This is version 23 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3