Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Superoxide dismutase

Gene

Varpa_2522

Organism
Variovorax paradoxus (strain EPS)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

Destroys radicals which are normally produced within the cells and which are toxic to biological systems.UniRule annotation

Catalytic activityi

2 superoxide + 2 H+ = O2 + H2O2.UniRule annotation

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Metal bindingi27Divalent metal cationUniRule annotation1
Metal bindingi81Divalent metal cationUniRule annotation1
Metal bindingi171Divalent metal cationUniRule annotation1
Metal bindingi175Divalent metal cationUniRule annotation1

GO - Molecular functioni

Keywordsi

Molecular functionOxidoreductaseUniRule annotation
LigandMetal-bindingUniRule annotation

Enzyme and pathway databases

BioCyciVPAR595537:G1GQO-2549-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
Superoxide dismutaseUniRule annotation (EC:1.15.1.1UniRule annotation)
Gene namesi
Ordered Locus Names:Varpa_2522Imported
OrganismiVariovorax paradoxus (strain EPS)Imported
Taxonomic identifieri595537 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesComamonadaceaeVariovorax
Proteomesi
  • UP000008917 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi595537.Varpa_2522

Structurei

3D structure databases

ProteinModelPortaliE6V0M1
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini3 – 89Sod_Fe_NInterPro annotationAdd BLAST87
Domaini99 – 204Sod_Fe_CInterPro annotationAdd BLAST106

Sequence similaritiesi

Belongs to the iron/manganese superoxide dismutase family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105CK4 Bacteria
COG0605 LUCA
HOGENOMiHOG000013583
KOiK04564
OMAiYEGWKGE
OrthoDBiPOG091H03Q7

Family and domain databases

Gene3Di1.10.287.990, 1 hit
2.40.500.20, 1 hit
InterProiView protein in InterPro
IPR001189 Mn/Fe_SOD
IPR019833 Mn/Fe_SOD_BS
IPR019832 Mn/Fe_SOD_C
IPR019831 Mn/Fe_SOD_N
IPR036324 Mn/Fe_SOD_N_sf
IPR036314 SOD_C_sf
PfamiView protein in Pfam
PF02777 Sod_Fe_C, 1 hit
PF00081 Sod_Fe_N, 1 hit
PIRSFiPIRSF000349 SODismutase, 1 hit
PRINTSiPR01703 MNSODISMTASE
SUPFAMiSSF46609 SSF46609, 1 hit
SSF54719 SSF54719, 1 hit
PROSITEiView protein in PROSITE
PS00088 SOD_MN, 1 hit

Sequencei

Sequence statusi: Complete.

E6V0M1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLYTLPALPY AFDALEPHLD AQTMEIHHGK HHQTYVNNLN AAVKDTPHEG
60 70 80 90 100
TPVEQLIVDI EQLPEALRAP VRNNGGGHAN HSLFWTVMAP VGQGGGGTPT
110 120 130 140 150
GDLAKAIDAD LGGFDVFREA FTKAALTRFG SGWAWLSVAK GGKLAVESSG
160 170 180 190 200
NQDSPLMRGI GSGNTPILGL DVWEHAYYLK YQNRRPEYIA AFYNVVNWAE
210
VARRHAAALA AIRD
Length:214
Mass (Da):23,238
Last modified:March 8, 2011 - v1
Checksum:i7F0AF452A8E062D6
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002417 Genomic DNA Translation: ADU36722.1
RefSeqiWP_013540953.1, NC_014931.1

Genome annotation databases

EnsemblBacteriaiADU36722; ADU36722; Varpa_2522
GeneIDi29719504
KEGGivpe:Varpa_2522

Similar proteinsi

Entry informationi

Entry nameiE6V0M1_VARPE
AccessioniPrimary (citable) accession number: E6V0M1
Entry historyiIntegrated into UniProtKB/TrEMBL: March 8, 2011
Last sequence update: March 8, 2011
Last modified: March 28, 2018
This is version 44 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health