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E6UYG1

- E6UYG1_VARPE

UniProt

E6UYG1 - E6UYG1_VARPE

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Protein
Submitted name:

Ribulose-bisphosphate carboxylase

Gene
Varpa_3601
Organism
Variovorax paradoxus (strain EPS)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. magnesium ion binding Source: InterPro
  2. ribulose-bisphosphate carboxylase activity Source: UniProtKB-EC

GO - Biological processi

  1. carbon fixation Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LyaseImported

Enzyme and pathway databases

BioCyciVPAR595537:GHGJ-3637-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Ribulose-bisphosphate carboxylaseImported (EC:4.1.1.39Imported)
Gene namesi
Ordered Locus Names:Varpa_3601Imported
OrganismiVariovorax paradoxus (strain EPS)Imported
Taxonomic identifieri595537 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesComamonadaceaeVariovorax
ProteomesiUP000008917: Chromosome

Structurei

3D structure databases

ProteinModelPortaliE6UYG1.

Family & Domainsi

Sequence similaritiesi

Belongs to the RuBisCO large chain family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000230831.
KOiK01601.
OMAiFTQDWAS.

Family and domain databases

Gene3Di3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
InterProiIPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
IPR017444. RuBisCO_lsu_N.
[Graphical view]
PfamiPF00016. RuBisCO_large. 1 hit.
PF02788. RuBisCO_large_N. 1 hit.
[Graphical view]
SUPFAMiSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.

Sequencei

Sequence statusi: Complete.

E6UYG1-1 [UniParc]FASTAAdd to Basket

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MKSSSSYLKY VDIGLEVDSE KNVVATYLIE KAVTSRLDGL AFLGSVAAES    50
STGTWTDVKT ATAGANLIAG KVFAYDPAVG IAKIAYPIDL FEPGNISQLL 100
TVIAGNAFGL ADVSKLKLMD ISLPKMYLAS YLGPRHGIKG VYERLKIEKN 150
IPIIGSIIKP KCGLTASEHA EICFDAWSGL ASEGGTHGVD MVKDDEALTH 200
QPAFGSDFYT RIRLSIDAMK RAEDISGRKK IYVPNVTSSN VLESIRRADF 250
VARLGGDAIM IDFVMGGCSL LHTLRNQDLG LIIHGHRTLF AALHRAQDFG 300
VDYMVWAKLF RVIGGDQVHT GTPAIGVMSS KKAAVLDIVA SVTEATYLPS 350
TSSASGLAQD FDGLRSVLPI CGAGLDPLTT EKIVKELGPR VALFAGGGVH 400
GHPGGTRAGA ASLRESVEAV HSGTSFEDFA ATRNVPWLNE ALKHFGAFDK 450
QSPNSDAGVN M 461
Length:461
Mass (Da):49,001
Last modified:March 8, 2011 - v1
Checksum:iD051356ADB9970DA
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002417 Genomic DNA. Translation: ADU37785.1.
RefSeqiWP_013542012.1. NC_014931.1.
YP_004155896.1. NC_014931.1.

Genome annotation databases

EnsemblBacteriaiADU37785; ADU37785; Varpa_3601.
GeneIDi10130445.
KEGGivpe:Varpa_3601.
PATRICi45393261. VBIVarPar156291_3655.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002417 Genomic DNA. Translation: ADU37785.1 .
RefSeqi WP_013542012.1. NC_014931.1.
YP_004155896.1. NC_014931.1.

3D structure databases

ProteinModelPortali E6UYG1.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ADU37785 ; ADU37785 ; Varpa_3601 .
GeneIDi 10130445.
KEGGi vpe:Varpa_3601.
PATRICi 45393261. VBIVarPar156291_3655.

Phylogenomic databases

HOGENOMi HOG000230831.
KOi K01601.
OMAi FTQDWAS.

Enzyme and pathway databases

BioCyci VPAR595537:GHGJ-3637-MONOMER.

Family and domain databases

Gene3Di 3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
InterProi IPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
IPR017444. RuBisCO_lsu_N.
[Graphical view ]
Pfami PF00016. RuBisCO_large. 1 hit.
PF02788. RuBisCO_large_N. 1 hit.
[Graphical view ]
SUPFAMi SSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Complete sequence of Variovorax paradoxus EPS."
    US DOE Joint Genome Institute
    Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Teshima H., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Ovchinnikova G., Orwin P., Han J.-I.G., Woyke T.
    Submitted (DEC-2010) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: EPS.

Entry informationi

Entry nameiE6UYG1_VARPE
AccessioniPrimary (citable) accession number: E6UYG1
Entry historyi
Integrated into UniProtKB/TrEMBL: March 8, 2011
Last sequence update: March 8, 2011
Last modified: September 3, 2014
This is version 20 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3