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E6UYG1

- E6UYG1_VARPE

UniProt

E6UYG1 - E6UYG1_VARPE

Protein
Submitted name:

Ribulose-bisphosphate carboxylase

Gene

Varpa_3601

Organism
Variovorax paradoxus (strain EPS)
Status
Unreviewed - Annotation score: 1 out of 5- Protein inferred from homologyi
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    • History
      Entry version 21 (01 Oct 2014)
      Sequence version 1 (08 Mar 2011)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. magnesium ion binding Source: InterPro
    2. ribulose-bisphosphate carboxylase activity Source: UniProtKB-EC

    GO - Biological processi

    1. carbon fixation Source: InterPro

    Keywords - Molecular functioni

    LyaseImported

    Enzyme and pathway databases

    BioCyciVPAR595537:GHGJ-3637-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Ribulose-bisphosphate carboxylaseImported (EC:4.1.1.39Imported)
    Gene namesi
    Ordered Locus Names:Varpa_3601Imported
    OrganismiVariovorax paradoxus (strain EPS)Imported
    Taxonomic identifieri595537 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesComamonadaceaeVariovorax
    ProteomesiUP000008917: Chromosome

    Structurei

    3D structure databases

    ProteinModelPortaliE6UYG1.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the RuBisCO large chain family.UniRule annotation

    Phylogenomic databases

    HOGENOMiHOG000230831.
    KOiK01601.
    OMAiFTQDWAS.

    Family and domain databases

    Gene3Di3.20.20.110. 1 hit.
    3.30.70.150. 1 hit.
    InterProiIPR000685. RuBisCO_lsu_C.
    IPR017443. RuBisCO_lsu_fd_N.
    IPR017444. RuBisCO_lsu_N.
    [Graphical view]
    PfamiPF00016. RuBisCO_large. 1 hit.
    PF02788. RuBisCO_large_N. 1 hit.
    [Graphical view]
    SUPFAMiSSF51649. SSF51649. 1 hit.
    SSF54966. SSF54966. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    E6UYG1-1 [UniParc]FASTAAdd to Basket

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    MKSSSSYLKY VDIGLEVDSE KNVVATYLIE KAVTSRLDGL AFLGSVAAES    50
    STGTWTDVKT ATAGANLIAG KVFAYDPAVG IAKIAYPIDL FEPGNISQLL 100
    TVIAGNAFGL ADVSKLKLMD ISLPKMYLAS YLGPRHGIKG VYERLKIEKN 150
    IPIIGSIIKP KCGLTASEHA EICFDAWSGL ASEGGTHGVD MVKDDEALTH 200
    QPAFGSDFYT RIRLSIDAMK RAEDISGRKK IYVPNVTSSN VLESIRRADF 250
    VARLGGDAIM IDFVMGGCSL LHTLRNQDLG LIIHGHRTLF AALHRAQDFG 300
    VDYMVWAKLF RVIGGDQVHT GTPAIGVMSS KKAAVLDIVA SVTEATYLPS 350
    TSSASGLAQD FDGLRSVLPI CGAGLDPLTT EKIVKELGPR VALFAGGGVH 400
    GHPGGTRAGA ASLRESVEAV HSGTSFEDFA ATRNVPWLNE ALKHFGAFDK 450
    QSPNSDAGVN M 461
    Length:461
    Mass (Da):49,001
    Last modified:March 8, 2011 - v1
    Checksum:iD051356ADB9970DA
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002417 Genomic DNA. Translation: ADU37785.1.
    RefSeqiWP_013542012.1. NC_014931.1.
    YP_004155896.1. NC_014931.1.

    Genome annotation databases

    EnsemblBacteriaiADU37785; ADU37785; Varpa_3601.
    GeneIDi10130445.
    KEGGivpe:Varpa_3601.
    PATRICi45393261. VBIVarPar156291_3655.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002417 Genomic DNA. Translation: ADU37785.1 .
    RefSeqi WP_013542012.1. NC_014931.1.
    YP_004155896.1. NC_014931.1.

    3D structure databases

    ProteinModelPortali E6UYG1.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ADU37785 ; ADU37785 ; Varpa_3601 .
    GeneIDi 10130445.
    KEGGi vpe:Varpa_3601.
    PATRICi 45393261. VBIVarPar156291_3655.

    Phylogenomic databases

    HOGENOMi HOG000230831.
    KOi K01601.
    OMAi FTQDWAS.

    Enzyme and pathway databases

    BioCyci VPAR595537:GHGJ-3637-MONOMER.

    Family and domain databases

    Gene3Di 3.20.20.110. 1 hit.
    3.30.70.150. 1 hit.
    InterProi IPR000685. RuBisCO_lsu_C.
    IPR017443. RuBisCO_lsu_fd_N.
    IPR017444. RuBisCO_lsu_N.
    [Graphical view ]
    Pfami PF00016. RuBisCO_large. 1 hit.
    PF02788. RuBisCO_large_N. 1 hit.
    [Graphical view ]
    SUPFAMi SSF51649. SSF51649. 1 hit.
    SSF54966. SSF54966. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Complete sequence of Variovorax paradoxus EPS."
      US DOE Joint Genome Institute
      Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Teshima H., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Ovchinnikova G., Orwin P., Han J.-I.G., Woyke T.
      Submitted (DEC-2010) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: EPSImported.

    Entry informationi

    Entry nameiE6UYG1_VARPE
    AccessioniPrimary (citable) accession number: E6UYG1
    Entry historyi
    Integrated into UniProtKB/TrEMBL: March 8, 2011
    Last sequence update: March 8, 2011
    Last modified: October 1, 2014
    This is version 21 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3