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Protein

Aldose 1-epimerase

Gene

Varpa_1108

Organism
Variovorax paradoxus (strain EPS)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Converts alpha-aldose to the beta-anomer.UniRule annotation

Catalytic activityi

Alpha-D-glucose = beta-D-glucose.UniRule annotation

Pathway:ihexose metabolism

This protein is involved in the pathway hexose metabolism, which is part of Carbohydrate metabolism.UniRule annotation
View all proteins of this organism that are known to be involved in the pathway hexose metabolism and in Carbohydrate metabolism.

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

IsomeraseUniRule annotationImported

Keywords - Biological processi

Carbohydrate metabolismUniRule annotation

Enzyme and pathway databases

BioCyciVPAR595537:GHGJ-1120-MONOMER.
UniPathwayiUPA00242.

Names & Taxonomyi

Protein namesi
Recommended name:
Aldose 1-epimeraseUniRule annotation (EC:5.1.3.3UniRule annotation)
Alternative name(s):
Galactose mutarotaseUniRule annotation
Gene namesi
Ordered Locus Names:Varpa_1108Imported
OrganismiVariovorax paradoxus (strain EPS)Imported
Taxonomic identifieri595537 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesComamonadaceaeVariovorax
ProteomesiUP000008917 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi595537.Varpa_1108.

Family & Domainsi

Sequence similaritiesi

Belongs to the aldose epimerase family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000072798.
KOiK01785.
OMAiSPNHPDW.

Family and domain databases

Gene3Di2.70.98.10. 1 hit.
InterProiIPR015443. Aldose_1-epimerase.
IPR008183. Aldose_1/G6P_1-epimerase.
IPR011013. Gal_mutarotase_SF_dom.
IPR014718. Glyco_hydro-type_carb-bd_sub.
[Graphical view]
PfamiPF01263. Aldose_epim. 1 hit.
[Graphical view]
PIRSFiPIRSF005096. GALM. 1 hit.
SUPFAMiSSF74650. SSF74650. 1 hit.

Sequencei

Sequence statusi: Complete.

E6UWM9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSSSITSREY GRMPDGRVVT EYTLDNGRGL SLSAINHGGI VTALRVPDRD
60 70 80 90 100
GQAANIVLGL PSLDDYMKPH PHFGTIVGRY ANRIAAGRFP LDGTAHQLGL
110 120 130 140 150
NDGVNSLHGG AKGFGTRFWQ IEPVSAEDAR GDIAIELRYT SADGEEGYPG
160 170 180 190 200
EVQLTVRYTL SATENTWRID YRATTDKPTV LNLSHHDYFN LAGSGDVMDH
210 220 230 240 250
VLTLPANRYC PVDATLIPPG LAEVGATPFD FRTPARIGER IREGHEQLLR
260 270 280 290 300
AHGYDHNWVL DGDRGGDGLA LAARLAHEAS GRVMEVHTTE PGVQFYSGNF
310 320 330 340 350
LDGSLMGSQG ASLRQGDGLC LETQHYPDSP NQPGFPSTVL RPCEVFRSTT

EHRFSVG
Length:357
Mass (Da):38,783
Last modified:March 8, 2011 - v1
Checksum:iCC8EDB914757DB7C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002417 Genomic DNA. Translation: ADU35326.1.
RefSeqiWP_013539571.1. NC_014931.1.

Genome annotation databases

EnsemblBacteriaiADU35326; ADU35326; Varpa_1108.
KEGGivpe:Varpa_1108.
PATRICi45388177. VBIVarPar156291_1144.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002417 Genomic DNA. Translation: ADU35326.1.
RefSeqiWP_013539571.1. NC_014931.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi595537.Varpa_1108.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADU35326; ADU35326; Varpa_1108.
KEGGivpe:Varpa_1108.
PATRICi45388177. VBIVarPar156291_1144.

Phylogenomic databases

HOGENOMiHOG000072798.
KOiK01785.
OMAiSPNHPDW.

Enzyme and pathway databases

UniPathwayiUPA00242.
BioCyciVPAR595537:GHGJ-1120-MONOMER.

Family and domain databases

Gene3Di2.70.98.10. 1 hit.
InterProiIPR015443. Aldose_1-epimerase.
IPR008183. Aldose_1/G6P_1-epimerase.
IPR011013. Gal_mutarotase_SF_dom.
IPR014718. Glyco_hydro-type_carb-bd_sub.
[Graphical view]
PfamiPF01263. Aldose_epim. 1 hit.
[Graphical view]
PIRSFiPIRSF005096. GALM. 1 hit.
SUPFAMiSSF74650. SSF74650. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Complete sequence of Variovorax paradoxus EPS."
    US DOE Joint Genome Institute
    Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Teshima H., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Ovchinnikova G., Orwin P., Han J.-I.G., Woyke T.
    Submitted (DEC-2010) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: EPSImported.

Entry informationi

Entry nameiE6UWM9_VARPE
AccessioniPrimary (citable) accession number: E6UWM9
Entry historyi
Integrated into UniProtKB/TrEMBL: March 8, 2011
Last sequence update: March 8, 2011
Last modified: July 22, 2015
This is version 27 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.