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Protein

Glycerol-3-phosphate dehydrogenase

Gene

Varpa_2223

Organism
Variovorax paradoxus (strain EPS)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

sn-glycerol 3-phosphate + a quinone = glycerone phosphate + a quinol.UniRule annotation

Cofactori

FADUniRule annotation

GO - Molecular functioni

  1. sn-glycerol-3-phosphate:ubiquinone-8 oxidoreductase activity Source: UniProtKB-EC

GO - Biological processi

  1. glycerol-3-phosphate metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseUniRule annotationSAAS annotation

Keywords - Ligandi

FlavoproteinUniRule annotation

Enzyme and pathway databases

BioCyciVPAR595537:GHGJ-2243-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Glycerol-3-phosphate dehydrogenaseUniRule annotation (EC:1.1.5.3UniRule annotation)
Gene namesi
Ordered Locus Names:Varpa_2223Imported
OrganismiVariovorax paradoxus (strain EPS)Imported
Taxonomic identifieri595537 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesComamonadaceaeVariovorax
ProteomesiUP000008917 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

  1. glycerol-3-phosphate dehydrogenase complex Source: InterPro
Complete GO annotation...

Structurei

3D structure databases

ProteinModelPortaliE6UVV1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000004811.
KOiK00111.
OMAiGPWVGDV.

Family and domain databases

InterProiIPR006076. FAD-dep_OxRdtase.
IPR000447. G3P_DH_FAD-dep.
[Graphical view]
PfamiPF01266. DAO. 1 hit.
[Graphical view]
PRINTSiPR01001. FADG3PDH.
PROSITEiPS00977. FAD_G3PDH_1. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

E6UVV1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKKHENTMAP FSDQSHASTD PLPVSDSSSH PPLPTTDCDV LIVGGGINGC
60 70 80 90 100
GIARDLAGRG WRVVLCEKDD LASHTSSSST KLIHGGLRYL EYYEFSLVRK
110 120 130 140 150
ALQEREVLLK SAPHIMWPLR FVMPHDPSMR PAWMIRIGLF MYDHLAKREV
160 170 180 190 200
LPGSRSVDLH KHAAGKPLKN QYKRGFIYSD GWVDDARLVL LNALDAKARG
210 220 230 240 250
AEVLTRTRCT HARRDADGWT ATLESPQGTR TVRARAVVNA AGPWAESFLR
260 270 280 290 300
GVAQSAKGES LATKSLRLVK GSHIIVPRLF EHDHAYIFQN PDKRIIFAIP
310 320 330 340 350
YQDEFTLIGT TDIELNGDDP GAARIAQEEI DYLCTQASRY FEKPIVPADV
360 370 380 390 400
VWTYSGVRPL LDDASGDPSA VTRDYMLESN TTAAPLLSVW GGKITTFRKL
410 420 430 440 450
AEDAADEVGK MLGQSNAQRP AWTDGAFLAG GDLSAWIGAP KRPDDDFERF
460 470 480 490 500
VSAVQAKYPW LYGKLTRRLA RAYGARVSEL LGDAKSLADL GPAVAPDLHE
510 520 530 540 550
RELRFLQTHE WAVSSDDVLW RRSKLGLHYT PAEREQVAAW LEANAKNNDK

VEVEVS
Length:556
Mass (Da):61,661
Last modified:March 8, 2011 - v1
Checksum:iE8A3D438196EF9C1
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002417 Genomic DNA. Translation: ADU36429.1.
RefSeqiWP_013540664.1. NC_014931.1.
YP_004154540.1. NC_014931.1.

Genome annotation databases

EnsemblBacteriaiADU36429; ADU36429; Varpa_2223.
KEGGivpe:Varpa_2223.
PATRICi45390448. VBIVarPar156291_2268.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002417 Genomic DNA. Translation: ADU36429.1.
RefSeqiWP_013540664.1. NC_014931.1.
YP_004154540.1. NC_014931.1.

3D structure databases

ProteinModelPortaliE6UVV1.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADU36429; ADU36429; Varpa_2223.
KEGGivpe:Varpa_2223.
PATRICi45390448. VBIVarPar156291_2268.

Phylogenomic databases

HOGENOMiHOG000004811.
KOiK00111.
OMAiGPWVGDV.

Enzyme and pathway databases

BioCyciVPAR595537:GHGJ-2243-MONOMER.

Family and domain databases

InterProiIPR006076. FAD-dep_OxRdtase.
IPR000447. G3P_DH_FAD-dep.
[Graphical view]
PfamiPF01266. DAO. 1 hit.
[Graphical view]
PRINTSiPR01001. FADG3PDH.
PROSITEiPS00977. FAD_G3PDH_1. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Complete sequence of Variovorax paradoxus EPS."
    US DOE Joint Genome Institute
    Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Teshima H., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Ovchinnikova G., Orwin P., Han J.-I.G., Woyke T.
    Submitted (NOV-2010) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: EPSImported.

Entry informationi

Entry nameiE6UVV1_VARPE
AccessioniPrimary (citable) accession number: E6UVV1
Entry historyi
Integrated into UniProtKB/TrEMBL: March 8, 2011
Last sequence update: March 8, 2011
Last modified: April 1, 2015
This is version 23 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.