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Protein

Superoxide dismutase

Gene

Clo1313_0558

Organism
Clostridium thermocellum (strain DSM 1313 / LMG 6656 / LQ8) (Ruminiclostridium thermocellum)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Destroys radicals which are normally produced within the cells and which are toxic to biological systems.UniRule annotation

Catalytic activityi

2 superoxide + 2 H+ = O2 + H2O2.UniRule annotation

GO - Molecular functioni

  1. metal ion binding Source: InterPro
  2. superoxide dismutase activity Source: UniProtKB-EC
Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseUniRule annotationImported

Enzyme and pathway databases

BioCyciCTHE637887:GLBN-573-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Superoxide dismutaseUniRule annotation (EC:1.15.1.1UniRule annotation)
Gene namesi
Ordered Locus Names:Clo1313_0558Imported
OrganismiClostridium thermocellum (strain DSM 1313 / LMG 6656 / LQ8) (Ruminiclostridium thermocellum)Imported
Taxonomic identifieri637887 [NCBI]
Taxonomic lineageiBacteriaFirmicutesClostridiaClostridialesRuminococcaceaeRuminiclostridium
ProteomesiUP000008083: Chromosome

Structurei

3D structure databases

ProteinModelPortaliE6UTM0.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the iron/manganese superoxide dismutase family.UniRule annotation

Phylogenomic databases

KOiK04564.
OMAiMGPGESK.

Family and domain databases

InterProiIPR001189. Mn/Fe_SOD.
IPR019833. Mn/Fe_SOD_BS.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
[Graphical view]
PANTHERiPTHR11404. PTHR11404. 1 hit.
PfamiPF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
[Graphical view]
PIRSFiPIRSF000349. SODismutase. 1 hit.
PRINTSiPR01703. MNSODISMTASE.
SUPFAMiSSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.
PROSITEiPS00088. SOD_MN. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

E6UTM0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MQYAMMSIAP GQHRLPPLPY PYNALEPVIS AEALRIHHDM HHKAYVDGLN
60 70 80 90 100
RAEINLVEAR KNNDFKYIKY WENQLAFNGS GHILHSIFWT VMAPLGRGGK
110 120 130 140 150
PGIHTTNQIN SYFGSFNAFA EQFKSAAENV EASGWGILTW QPTWRRLEIL
160 170 180 190 200
QAEKHQDLTQ WSGIPILVCD VWEHAYYLDY QNRRKEYISR WWDLINWHEV
210 220
ERRLLLAMNG QVPLTVMNNY WLA
Length:223
Mass (Da):26,137
Last modified:March 8, 2011 - v1
Checksum:i473A198767534BBA
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002416 Genomic DNA. Translation: ADU73642.1.
RefSeqiYP_005687093.1. NC_017304.1.

Genome annotation databases

EnsemblBacteriaiADU73642; ADU73642; Clo1313_0558.
GeneIDi12420260.
KEGGictx:Clo1313_0558.
PATRICi45475729. VBICloThe140364_0614.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002416 Genomic DNA. Translation: ADU73642.1.
RefSeqiYP_005687093.1. NC_017304.1.

3D structure databases

ProteinModelPortaliE6UTM0.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADU73642; ADU73642; Clo1313_0558.
GeneIDi12420260.
KEGGictx:Clo1313_0558.
PATRICi45475729. VBICloThe140364_0614.

Phylogenomic databases

KOiK04564.
OMAiMGPGESK.

Enzyme and pathway databases

BioCyciCTHE637887:GLBN-573-MONOMER.

Family and domain databases

InterProiIPR001189. Mn/Fe_SOD.
IPR019833. Mn/Fe_SOD_BS.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
[Graphical view]
PANTHERiPTHR11404. PTHR11404. 1 hit.
PfamiPF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
[Graphical view]
PIRSFiPIRSF000349. SODismutase. 1 hit.
PRINTSiPR01703. MNSODISMTASE.
SUPFAMiSSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.
PROSITEiPS00088. SOD_MN. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 1313 / LMG 6656 / LQ8Imported.

Entry informationi

Entry nameiE6UTM0_CLOTL
AccessioniPrimary (citable) accession number: E6UTM0
Entry historyi
Integrated into UniProtKB/TrEMBL: March 8, 2011
Last sequence update: March 8, 2011
Last modified: January 7, 2015
This is version 24 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.