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Protein
Submitted name:

Type II site-specific deoxyribonuclease

Gene

Rumal_0668

Organism
Ruminococcus albus (strain ATCC 27210 / DSM 20455 / JCM 14654 / NCDO 2250 / 7)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. DNA binding Source: InterPro
  2. Type II site-specific deoxyribonuclease activity Source: UniProtKB-EC

GO - Biological processi

  1. DNA restriction-modification system Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

HydrolaseImported

Enzyme and pathway databases

BioCyciRALB697329:GIWQ-690-MONOMER.

Protein family/group databases

REBASEi30842. Ral7ORF666P.

Names & Taxonomyi

Protein namesi
Submitted name:
Type II site-specific deoxyribonucleaseImported (EC:3.1.21.4Imported)
Gene namesi
Ordered Locus Names:Rumal_0668Imported
OrganismiRuminococcus albus (strain ATCC 27210 / DSM 20455 / JCM 14654 / NCDO 2250 / 7)Imported
Taxonomic identifieri697329 [NCBI]
Taxonomic lineageiBacteriaFirmicutesClostridiaClostridialesRuminococcaceaeRuminococcus
ProteomesiUP000006919: Chromosome

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000244578.
KOiK01155.

Family and domain databases

InterProiIPR021191. Restrct_endonuc_II_DpmII.
IPR007637. Restrct_endonuc_II_DpmII-like.
[Graphical view]
PfamiPF04556. DpnII. 1 hit.
[Graphical view]
PIRSFiPIRSF016080. Restrict_endonuc_II_DpmII. 1 hit.

Sequencei

Sequence statusi: Complete.

E6UHG9-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MKRDFNEWLG KFRDSIANYE YYIDFAKVHK NVDSIKVELN ILNALIGSKD
60 70 80 90 100
IENEFMQIVS KYPETLKCIP LLLAVRANEI YAIDGDGEFS YNFKKMNYSP
110 120 130 140 150
EQYTVFMRKT GLFELMEKHI IHSLVDYATG VETGLDSNGR KNRGGHLMED
160 170 180 190 200
LVESFIVKAG YIKGQNYFKE MYIHEITEKW GIDLSAISNQ GKAEKRFDFV
210 220 230 240 250
IKTENMIYGI ETNFYASGGS KLNETARSYK QIAQEVDTID GFTFVWFTDG
260 270 280
KGWQSARRNL EETFDVLDTV YSIDDLEKGI LKEVL
Length:285
Mass (Da):32,945
Last modified:March 8, 2011 - v1
Checksum:iE92FFF10C6B24E05
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002403 Genomic DNA. Translation: ADU21214.1.
RefSeqiWP_013497405.1. NZ_KK211251.1.
YP_004103848.1. NC_014833.1.

Genome annotation databases

EnsemblBacteriaiADU21214; ADU21214; Rumal_0668.
GeneIDi10076914.
KEGGiral:Rumal_0668.
PATRICi45357703. VBIRumAlb150544_1397.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002403 Genomic DNA. Translation: ADU21214.1.
RefSeqiWP_013497405.1. NZ_KK211251.1.
YP_004103848.1. NC_014833.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein family/group databases

REBASEi30842. Ral7ORF666P.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADU21214; ADU21214; Rumal_0668.
GeneIDi10076914.
KEGGiral:Rumal_0668.
PATRICi45357703. VBIRumAlb150544_1397.

Phylogenomic databases

HOGENOMiHOG000244578.
KOiK01155.

Enzyme and pathway databases

BioCyciRALB697329:GIWQ-690-MONOMER.

Family and domain databases

InterProiIPR021191. Restrct_endonuc_II_DpmII.
IPR007637. Restrct_endonuc_II_DpmII-like.
[Graphical view]
PfamiPF04556. DpnII. 1 hit.
[Graphical view]
PIRSFiPIRSF016080. Restrict_endonuc_II_DpmII. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 27210 / DSM 20455 / JCM 14654 / NCDO 2250 / 7Imported.

Entry informationi

Entry nameiE6UHG9_RUMA7
AccessioniPrimary (citable) accession number: E6UHG9
Entry historyi
Integrated into UniProtKB/TrEMBL: March 8, 2011
Last sequence update: March 8, 2011
Last modified: February 4, 2015
This is version 24 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.