E6UD01 (E6UD01_RUMA7) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Alanine racemase EMBL ADU20795.1
EC=5.1.1.1 EMBL ADU20795.1

Gene names

Ordered Locus Names:

Rumal_0238 EMBL ADU20795.1

Organism

Ruminococcus albus (strain ATCC 27210 / DSM 20455 / JCM 14654 / NCDO 2250 / 7) [Complete proteome] [HAMAP] EMBL ADU20795.1

Taxonomic identifier

697329 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Firmicutes › Clostridia › Clostridiales › Ruminococcaceae › Ruminococcus › Ruminococcus albus

Protein attributes

Sequence length	373 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Cofactor	Pyridoxal phosphate By similarity. SAAS SAAS011079
Sequence similarities	Belongs to the alanine racemase family. RuleBase RU004188

Ontologies

Keywords
Ligand	Pyridoxal phosphate SAAS SAAS011079
Molecular function	Isomerase SAAS SAAS011079 EMBL ADU20795.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	alanine metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	alanine racemase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	E6UD01 [UniParc]. Last modified March 8, 2011. Version 1. Checksum: 6EDD22E59419B162	FASTA	373	40,970
	10 20 30 40 50 60 MNFLRRCWAE IDLSAVDYNV CEYKKLLPQD TELMCVVKAS CYGHSDELIV PRLQQVHGVR 70 80 90 100 110 120 YFAVSNILEG IRLREIGING DILILGYTPP ECAAELVKYD IIQACTELCY AQELSANANG 130 140 150 160 170 180 TVRLHGAVDT GMTRIGVHGT AEEQADELAK VSALPNISLE GIFTHFSSAD GIDDADEKYT 190 200 210 220 230 240 QMQSERFFRV RDLLKEKGIR LKHAHIKNSA GGAYGYGDES TLARLGIILY GLYPDPAKSL 250 260 270 280 290 300 PFVPKPVMTL KAVVSQVKWI DEGTAVSYGR TFVSDRRMKL ATVTAGYADG YPRALSNKGE 310 320 330 340 350 360 VIIRGKKCRI CGRVCMDQFM CDVTDIPDAA PGDEVILMNA EINADVIAAL TGTIGYEITC 370 DITSRVPRVP VNS

References

[1]

"Complete Genome of the Cellulolytic Ruminal Bacterium Ruminococcus albus 7." Suen G., Stevenson D.M., Bruce D.C., Chertkov O., Copeland A., Cheng J.F., Detter C., Detter J.C., Goodwin L.A., Han C.S., Hauser L.J., Ivanova N.N., Kyrpides N.C., Land M.L., Lapidus A., Lucas S., Ovchinnikova G., Pitluck S. , Tapia R., Woyke T., Boyum J., Mead D., Weimer P.J. J. Bacteriol. 193:5574-5575(2011) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 27210 / DSM 20455 / JCM 14654 / NCDO 2250 / 7.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002403 Genomic DNA. Translation: ADU20795.1.
RefSeq	YP_004103429.1. NC_014833.1.
3D structure databases
ProteinModelPortal	E6UD01.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ADU20795; ADU20795; Rumal_0238.
GeneID	10076468.
KEGG	ral:Rumal_0238.
PATRIC	45356795. VBIRumAlb150544_0959.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000031444.
KO	K01775.
Enzyme and pathway databases
BioCyc	RALB697329:GIWQ-244-MONOMER.
Family and domain databases
Gene3D	2.40.37.10. 1 hit.
HAMAP	MF_01201. Ala_racemase.
InterPro	IPR000821. Ala_racemase. IPR009006. Ala_racemase/Decarboxylase_C. IPR011079. Ala_racemase_C. IPR001608. Ala_racemase_N. [Graphical view]
Pfam	PF00842. Ala_racemase_C. 1 hit. PF01168. Ala_racemase_N. 1 hit. [Graphical view]
PRINTS	PR00992. ALARACEMASE.
SMART	SM01005. Ala_racemase_C. 1 hit. [Graphical view]
SUPFAM	SSF50621. Racem_decarbox_C. 1 hit.
TIGRFAMs	TIGR00492. alr. 1 hit.
ProtoNet	Search...

Entry information

Entry name

E6UD01_RUMA7

Accession

Primary (citable) accession number: E6UD01

Entry history

Integrated into UniProtKB/TrEMBL:	March 8, 2011
Last sequence update:	March 8, 2011
Last modified:	May 1, 2013
This is version 21 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)