Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Basket 0
(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

E6U338

- E6U338_ETHHY

UniProt

E6U338 - E6U338_ETHHY

Protein

1,4-alpha-glucan branching enzyme GlgB

Gene

glgB

Organism
Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033 / YUAN-3)
Status
Unreviewed - Annotation score: 3 out of 5- Protein inferred from homologyi
    • BLAST
    • Align
    • Format
    • Add to basket
    • History
      Entry version 24 (01 Oct 2014)
      Sequence version 1 (08 Mar 2011)
      Previous versions | rss
    • Help video
    • Feedback
    • Comment

    Functioni

    Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position.UniRule annotation

    Catalytic activityi

    Transfers a segment of a (1->4)-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain.UniRule annotationSAAS annotation

    Pathwayi

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Active sitei313 – 3131NucleophileUniRule annotation
    Active sitei366 – 3661Proton donorUniRule annotation

    GO - Molecular functioni

    1. 1,4-alpha-glucan branching enzyme activity Source: UniProtKB-HAMAP
    2. cation binding Source: InterPro
    3. hydrolase activity, hydrolyzing O-glycosyl compounds Source: InterPro

    GO - Biological processi

    1. glycogen biosynthetic process Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    GlycosyltransferaseUniRule annotationSAAS annotation, Transferase

    Keywords - Biological processi

    Carbohydrate metabolism, Glycogen biosynthesisUniRule annotation, Glycogen metabolismUniRule annotation

    Enzyme and pathway databases

    BioCyciEHAR663278:GIWT-2033-MONOMER.
    UniPathwayiUPA00164.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    1,4-alpha-glucan branching enzyme GlgBUniRule annotation (EC:2.4.1.18UniRule annotation)
    Alternative name(s):
    1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferaseUniRule annotation
    Alpha-(1->4)-glucan branching enzymeUniRule annotation
    Glycogen branching enzymeUniRule annotation
    Gene namesi
    Name:glgBUniRule annotation
    Ordered Locus Names:Ethha_1992Imported
    OrganismiEthanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033 / YUAN-3)Imported
    Taxonomic identifieri663278 [NCBI]
    Taxonomic lineageiBacteriaFirmicutesClostridiaClostridialesRuminococcaceaeEthanoligenens
    ProteomesiUP000001551: Chromosome

    Interactioni

    Subunit structurei

    Monomer.UniRule annotation

    Structurei

    3D structure databases

    ProteinModelPortaliE6U338.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.UniRule annotation

    Phylogenomic databases

    HOGENOMiHOG000283037.
    KOiK00700.
    OMAiAKLLFMG.

    Family and domain databases

    Gene3Di2.60.40.10. 1 hit.
    2.60.40.1180. 1 hit.
    3.20.20.80. 1 hit.
    HAMAPiMF_00685. GlgB.
    InterProiIPR006048. A-amylase_b_C.
    IPR006407. GlgB.
    IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR004193. Glyco_hydro_13_N.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    IPR013783. Ig-like_fold.
    [Graphical view]
    PANTHERiPTHR10357. PTHR10357. 1 hit.
    PfamiPF00128. Alpha-amylase. 1 hit.
    PF02806. Alpha-amylase_C. 1 hit.
    PF02922. CBM_48. 1 hit.
    [Graphical view]
    PIRSFiPIRSF000463. GlgB. 1 hit.
    SUPFAMiSSF51445. SSF51445. 1 hit.
    TIGRFAMsiTIGR01515. branching_enzym. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    E6U338-1 [UniParc]FASTAAdd to Basket

    « Hide

    MYTNAPKKTG REQELQCFHE SVYPLSFEYF GGHSSHRSKK SGVVFRVWAP    50
    KAVSVSIVGD FNNWDASKNP MISVDDQGVW EGFVPGIKSF DIYKYQIETA 100
    DGKTLLKSDP YATHMETRPD TASRYYNLSG YHWKDQEWQK KKEKKSAYDV 150
    PMNIYELHAG SWKKYPDGNP FEYRKLAEEL IPYLQKMGYT HVELMPIMEY 200
    PLDNSWGYQV TGYFAPTSRY GSPRDFMAFV DYCHQADIGV IMDWVPAHFP 250
    KDAHGLYRFD GDCCYEYTDP LKQEHKSWGT CVFDYSKSEV RSFLVSNAIF 300
    WLQKYHIDGL RVDAVASMLY LDYDRKNGEW RPNQYGGHEN LEAVSFLQEL 350
    NREVFSRFPN ALMIAEESTA WPLVTKPVDV GGLGFNFKWN MGWMNDMLDY 400
    VSTDPYFRKD HHKDITFSFH YAFSENYILP ISHDEVVHGK RSLLEKMPGD 450
    KAEQFAGVRV FLAYMIAHPG KKLLFMGSEF GQVHEWDCHD ALQWQLLGEK 500
    GHQNLQDFTA ALNHFYLDQS PLWQNDFSWE GFQWISYDDN LQNIIAFRRI 550
    DRKGEELVCL FNFAPVKRDD YRIGIPAAGY YQEAFNTDAE QFGGTGESNK 600
    EPVPTEKIPL HGYQQSIALT VPPMAALFLK HQPK 634
    Length:634
    Mass (Da):73,621
    Last modified:March 8, 2011 - v1
    Checksum:iB7417F916BBDD377
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002400 Genomic DNA. Translation: ADU27510.1.
    RefSeqiYP_004092241.1. NC_014828.1.

    Genome annotation databases

    EnsemblBacteriaiADU27510; ADU27510; Ethha_1992.
    GeneIDi10092972.
    KEGGieha:Ethha_1992.
    PATRICi45211264. VBIEthHar145175_2168.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002400 Genomic DNA. Translation: ADU27510.1 .
    RefSeqi YP_004092241.1. NC_014828.1.

    3D structure databases

    ProteinModelPortali E6U338.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ADU27510 ; ADU27510 ; Ethha_1992 .
    GeneIDi 10092972.
    KEGGi eha:Ethha_1992.
    PATRICi 45211264. VBIEthHar145175_2168.

    Phylogenomic databases

    HOGENOMi HOG000283037.
    KOi K00700.
    OMAi AKLLFMG.

    Enzyme and pathway databases

    UniPathwayi UPA00164 .
    BioCyci EHAR663278:GIWT-2033-MONOMER.

    Family and domain databases

    Gene3Di 2.60.40.10. 1 hit.
    2.60.40.1180. 1 hit.
    3.20.20.80. 1 hit.
    HAMAPi MF_00685. GlgB.
    InterProi IPR006048. A-amylase_b_C.
    IPR006407. GlgB.
    IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR004193. Glyco_hydro_13_N.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    IPR013783. Ig-like_fold.
    [Graphical view ]
    PANTHERi PTHR10357. PTHR10357. 1 hit.
    Pfami PF00128. Alpha-amylase. 1 hit.
    PF02806. Alpha-amylase_C. 1 hit.
    PF02922. CBM_48. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF000463. GlgB. 1 hit.
    SUPFAMi SSF51445. SSF51445. 1 hit.
    TIGRFAMsi TIGR01515. branching_enzym. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Complete sequence of Ethanoligenens harbinense YUAN-3."
      Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., Pitluck S., Chertkov O., Misra M., Detter J.C., Han C., Tapia R., Land M., Hauser L., Jeffries C., Kyrpides N., Ivanova N., Mikhailova N.
      , Wang A., Mouttaki H., He Z., Zhou J., Hemme C.L., Woyke T.
      Submitted (DEC-2010) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: DSM 18485 / JCM 12961 / CGMCC 1.5033 / YUAN-3Imported.

    Entry informationi

    Entry nameiE6U338_ETHHY
    AccessioniPrimary (citable) accession number: E6U338
    Entry historyi
    Integrated into UniProtKB/TrEMBL: March 8, 2011
    Last sequence update: March 8, 2011
    Last modified: October 1, 2014
    This is version 24 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3