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Protein
Submitted name:

DNA polymerase LigD-like ligase domain-containing protein

Gene

Mspyr1_55390

Organism
Mycobacterium gilvum (strain DSM 45189 / LMG 24558 / Spyr1)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionLigaseImported

Enzyme and pathway databases

BioCyciMGIL278137:G12XG-5353-MONOMER

Names & Taxonomyi

Protein namesi
Submitted name:
DNA polymerase LigD-like ligase domain-containing proteinImported
Gene namesi
Ordered Locus Names:Mspyr1_55390Imported
Encoded oniPlasmid pMSPYR101Imported
OrganismiMycobacterium gilvum (strain DSM 45189 / LMG 24558 / Spyr1)Imported
Taxonomic identifieri278137 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaCorynebacterialesMycobacteriaceaeMycobacteriumMycobacterium fortuitum complex
Proteomesi
  • UP000008916 Componenti: Plasmid pMSPYR101

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini111 – 233DNA_LIGASE_A3InterPro annotationAdd BLAST123

Phylogenomic databases

HOGENOMiHOG000222509
KOiK01971
OMAiGGHDWTD
OrthoDBiPOG091H0AZ9

Family and domain databases

InterProiView protein in InterPro
IPR012309 DNA_ligase_ATP-dep_C
IPR012310 DNA_ligase_ATP-dep_cent
IPR014146 LigD_ligase_dom
IPR012340 NA-bd_OB-fold
PfamiView protein in Pfam
PF04679 DNA_ligase_A_C, 1 hit
PF01068 DNA_ligase_A_M, 1 hit
SUPFAMiSSF50249 SSF50249, 1 hit
TIGRFAMsiTIGR02779 NHEJ_ligase_lig, 1 hit
PROSITEiView protein in PROSITE
PS50160 DNA_LIGASE_A3, 1 hit

Sequencei

Sequence statusi: Complete.

E6TPR8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTRASLAPDR LVAPAPMLAT LGPAPRGGQF AVEVKFDGQR GILTVDRRVR
60 70 80 90 100
VTSRNGADIT ETFPELSAVA AAVGGRRMVL DGEIVAVDEH GRPSFRRLQR
110 120 130 140 150
RWPQQRRPGA QLVREVPTRF LAFDVMNIEG EDITHWPYRE RRELLDTLMV
160 170 180 190 200
MESSPALTVP RHWTDVAPAD MLAICADQHH EGIVCKRLDS PYRSGRSRDW
210 220 230 240 250
IKVPVRATTE AVIVGAFAGP RGEVGALILA AHDEAGRLVL LGQVGTGFSG
260 270 280 290 300
AERRRLATLL AGTEAPAPPV AEGASMSGVQ WFKPRYVGEV AYREYHAGKG
310 320
LRHASWKGLR TAPVSAVCLP RDTGAAPG
Length:328
Mass (Da):35,682
Last modified:March 8, 2011 - v1
Checksum:i2E8011F639D6E2B4
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002386 Genomic DNA Translation: ADU02037.1
RefSeqiWP_013470246.1, NC_014811.1

Genome annotation databases

EnsemblBacteriaiADU02037; ADU02037; Mspyr1_55390
KEGGimsp:Mspyr1_55390

Similar proteinsi

Entry informationi

Entry nameiE6TPR8_MYCSR
AccessioniPrimary (citable) accession number: E6TPR8
Entry historyiIntegrated into UniProtKB/TrEMBL: March 8, 2011
Last sequence update: March 8, 2011
Last modified: May 23, 2018
This is version 37 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported, PlasmidImported

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