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E6TPR8 (E6TPR8_MYCSR) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 18. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Mspyr1_55390 EMBL ADU02037.1
Encoded onPlasmid pMSPYR101 EMBL ADU02037.1
OrganismMycobacterium sp. (strain Spyr1) [Complete proteome] [HAMAP] EMBL ADU02037.1
Taxonomic identifier278137 [NCBI]
Taxonomic lineageBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeMycobacteriaceaeMycobacterium

Protein attributes

Sequence length328 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLigase EMBL ADU02037.1
   Technical termComplete proteome
Plasmid EMBL ADU02037.1
Gene Ontology (GO)
   Biological_processDNA recombination

Inferred from electronic annotation. Source: InterPro

DNA repair

Inferred from electronic annotation. Source: InterPro

   Molecular_functionATP binding

Inferred from electronic annotation. Source: InterPro

DNA ligase (ATP) activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
E6TPR8 [UniParc].

Last modified March 8, 2011. Version 1.
Checksum: 2E8011F639D6E2B4

FASTA32835,682
        10         20         30         40         50         60 
MTRASLAPDR LVAPAPMLAT LGPAPRGGQF AVEVKFDGQR GILTVDRRVR VTSRNGADIT 

        70         80         90        100        110        120 
ETFPELSAVA AAVGGRRMVL DGEIVAVDEH GRPSFRRLQR RWPQQRRPGA QLVREVPTRF 

       130        140        150        160        170        180 
LAFDVMNIEG EDITHWPYRE RRELLDTLMV MESSPALTVP RHWTDVAPAD MLAICADQHH 

       190        200        210        220        230        240 
EGIVCKRLDS PYRSGRSRDW IKVPVRATTE AVIVGAFAGP RGEVGALILA AHDEAGRLVL 

       250        260        270        280        290        300 
LGQVGTGFSG AERRRLATLL AGTEAPAPPV AEGASMSGVQ WFKPRYVGEV AYREYHAGKG 

       310        320 
LRHASWKGLR TAPVSAVCLP RDTGAAPG 

« Hide

References

[1]"Complete sequence of plasmid 1 of Mycobacterium sp. Spyr1."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., Pitluck S., LaButti K., Ivanova N.M., Mikhailova N.M., Land M., Hauser L., Koukkou A.I., Drainas C., Kyrpides N., Woyke T.
Submitted (DEC-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Spyr1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002386 Genomic DNA. Translation: ADU02037.1.
RefSeqYP_004074518.1. NC_014811.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADU02037; ADU02037; Mspyr1_55390.
GeneID10044335.
KEGGmsp:Mspyr1_55390.
PATRIC45280921. VBIMycSp109077_0183.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000222509.
KOK01971.
OMAQDNAAVF.

Enzyme and pathway databases

BioCycMSP278137:GHD6-5494-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR02779. NHEJ_ligase_lig. 1 hit.
PROSITEPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameE6TPR8_MYCSR
AccessionPrimary (citable) accession number: E6TPR8
Entry history
Integrated into UniProtKB/TrEMBL: March 8, 2011
Last sequence update: March 8, 2011
Last modified: April 16, 2014
This is version 18 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)