E6TPR8 (E6TPR8_MYCSR) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
DNA polymerase LigD-like ligase domain-containing protein EMBL ADU02037.1

Gene names

Ordered Locus Names:

Mspyr1_55390 EMBL ADU02037.1

Encoded on

Plasmid pMSPYR101 EMBL ADU02037.1

Organism

Mycobacterium sp. (strain Spyr1) [Complete proteome] [HAMAP] EMBL ADU02037.1

Taxonomic identifier

278137 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Actinobacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Corynebacterineae › Mycobacteriaceae › Mycobacterium › Mycobacterium gilvum

Protein attributes

Sequence length	328 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Ligase EMBL ADU02037.1
Technical term	Complete proteome Plasmid EMBL ADU02037.1
Gene Ontology (GO)
Biological_process	DNA recombination Inferred from electronic annotation. Source: InterPro DNA repair Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: InterPro DNA ligase (ATP) activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	E6TPR8 [UniParc]. Last modified March 8, 2011. Version 1. Checksum: 2E8011F639D6E2B4	FASTA	328	35,682
	10 20 30 40 50 60 MTRASLAPDR LVAPAPMLAT LGPAPRGGQF AVEVKFDGQR GILTVDRRVR VTSRNGADIT 70 80 90 100 110 120 ETFPELSAVA AAVGGRRMVL DGEIVAVDEH GRPSFRRLQR RWPQQRRPGA QLVREVPTRF 130 140 150 160 170 180 LAFDVMNIEG EDITHWPYRE RRELLDTLMV MESSPALTVP RHWTDVAPAD MLAICADQHH 190 200 210 220 230 240 EGIVCKRLDS PYRSGRSRDW IKVPVRATTE AVIVGAFAGP RGEVGALILA AHDEAGRLVL 250 260 270 280 290 300 LGQVGTGFSG AERRRLATLL AGTEAPAPPV AEGASMSGVQ WFKPRYVGEV AYREYHAGKG 310 320 LRHASWKGLR TAPVSAVCLP RDTGAAPG

References

[1]

"Complete sequence of plasmid 1 of Mycobacterium sp. Spyr1." US DOE Joint Genome Institute Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., Pitluck S., LaButti K., Ivanova N.M., Mikhailova N.M., Land M., Hauser L., Koukkou A.I., Drainas C., Kyrpides N., Woyke T. Submitted (DEC-2010) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Spyr1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002386 Genomic DNA. Translation: ADU02037.1.
RefSeq	YP_004074518.1. NC_014811.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ADU02037; ADU02037; Mspyr1_55390.
GeneID	10044335.
KEGG	msp:Mspyr1_55390.
PATRIC	45280921. VBIMycSp109077_0183.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000222509.
KO	K01971.
OMA	VCKRLDS.
Enzyme and pathway databases
BioCyc	MSP278137:GHD6-5520-MONOMER.
Family and domain databases
Gene3D	2.40.50.140. 1 hit.
InterPro	IPR012309. DNA_ligase_ATP-dep_C. IPR012310. DNA_ligase_ATP-dep_cent. IPR014146. DNA_pol_LigD_ligase_dom. IPR012340. NA-bd_OB-fold. [Graphical view]
Pfam	PF04679. DNA_ligase_A_C. 1 hit. PF01068. DNA_ligase_A_M. 1 hit. [Graphical view]
SUPFAM	SSF50249. Nucleic_acid_OB. 1 hit.
TIGRFAMs	TIGR02779. NHEJ_ligase_lig. 1 hit.
PROSITE	PS50160. DNA_LIGASE_A3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

E6TPR8_MYCSR

Accession

Primary (citable) accession number: E6TPR8

Entry history

Integrated into UniProtKB/TrEMBL:	March 8, 2011
Last sequence update:	March 8, 2011
Last modified:	May 1, 2013
This is version 14 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)