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E6TKH9

- E6TKH9_MYCSR

UniProt

E6TKH9 - E6TKH9_MYCSR

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Protein
Submitted name:

ATP-dependent DNA ligase

Gene

Mspyr1_49100

Organism
Mycobacterium sp. (strain Spyr1)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciMSP278137:GHD6-4868-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP-dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:Mspyr1_49100Imported
OrganismiMycobacterium sp. (strain Spyr1)Imported
Taxonomic identifieri278137 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeMycobacteriaceaeMycobacterium
ProteomesiUP000008916: Chromosome

Structurei

3D structure databases

ProteinModelPortaliE6TKH9.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000222508.
KOiK01971.
OMAiYRPHKSQ.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

E6TKH9-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MEAVDLPVRP PLEPMLAKAQ AKVPDDPGVW SYEPKWDGFR ALVFRDGDDV
60 70 80 90 100
VLLSRSGKDL GRYFPEVLDA VRDELAPHCV LDGEIVVPRE IGGRMRLDWE
110 120 130 140 150
SLSQRIHPAE SRITLLSEQT PAHFIGFDAL ALGDTPLMKE PFRTRREALI
160 170 180 190 200
DAVTPKQWCH VTRTTEDPQL GTQWLDEFEG AGLDGVIAKR LDGPYLPGKR
210 220 230 240 250
EMVKVKHHRD ADCVAMGYRI HKSGEGIGSI LLGLYRDDGE LQMVGGAASF
260 270 280 290 300
TAKARLKLLD DLEPLRIGDD LRDGEPSRWN SAADKRWIPV RPERVCEVAY
310 320 330 340 350
DQMEGNTEHG RRFRHAVKFL RWRPDRDPQS CTFDQLDVPL HFDLYDVLER

S
Length:351
Mass (Da):39,837
Last modified:March 8, 2011 - v1
Checksum:iEDC9807FBF085B83
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002385 Genomic DNA. Translation: ADU01445.1.
RefSeqiYP_004079279.1. NC_014814.1.

Genome annotation databases

EnsemblBacteriaiADU01445; ADU01445; Mspyr1_49100.
GeneIDi10049298.
KEGGimsp:Mspyr1_49100.
PATRICi45291053. VBIMycSp109077_5140.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002385 Genomic DNA. Translation: ADU01445.1 .
RefSeqi YP_004079279.1. NC_014814.1.

3D structure databases

ProteinModelPortali E6TKH9.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ADU01445 ; ADU01445 ; Mspyr1_49100 .
GeneIDi 10049298.
KEGGi msp:Mspyr1_49100.
PATRICi 45291053. VBIMycSp109077_5140.

Phylogenomic databases

HOGENOMi HOG000222508.
KOi K01971.
OMAi YRPHKSQ.

Enzyme and pathway databases

BioCyci MSP278137:GHD6-4868-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Complete sequence of chromosome of Mycobacterium sp. Spyr1."
    US DOE Joint Genome Institute
    Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., Pitluck S., LaButti K., Ivanova N.M., Mikhailova N.M., Land M., Hauser L., Koukkou A.I., Drainas C., Kyrpides N., Woyke T.
    Submitted (DEC-2010) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Spyr1Imported.

Entry informationi

Entry nameiE6TKH9_MYCSR
AccessioniPrimary (citable) accession number: E6TKH9
Entry historyi
Integrated into UniProtKB/TrEMBL: March 8, 2011
Last sequence update: March 8, 2011
Last modified: October 1, 2014
This is version 17 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3