E6TKH9 (E6TKH9_MYCSR) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
ATP-dependent DNA ligase EMBL ADU01445.1

Gene names

Ordered Locus Names:

Mspyr1_49100 EMBL ADU01445.1

Organism

Mycobacterium sp. (strain Spyr1) [Complete proteome] [HAMAP] EMBL ADU01445.1

Taxonomic identifier

278137 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Actinobacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Corynebacterineae › Mycobacteriaceae › Mycobacterium › Mycobacterium gilvum

Protein attributes

Sequence length	351 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Ligase EMBL ADU01445.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	DNA ligation involved in DNA repair Inferred from electronic annotation. Source: InterPro DNA recombination Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: InterPro DNA ligase (ATP) activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	E6TKH9 [UniParc]. Last modified March 8, 2011. Version 1. Checksum: EDC9807FBF085B83	FASTA	351	39,837
	10 20 30 40 50 60 MEAVDLPVRP PLEPMLAKAQ AKVPDDPGVW SYEPKWDGFR ALVFRDGDDV VLLSRSGKDL 70 80 90 100 110 120 GRYFPEVLDA VRDELAPHCV LDGEIVVPRE IGGRMRLDWE SLSQRIHPAE SRITLLSEQT 130 140 150 160 170 180 PAHFIGFDAL ALGDTPLMKE PFRTRREALI DAVTPKQWCH VTRTTEDPQL GTQWLDEFEG 190 200 210 220 230 240 AGLDGVIAKR LDGPYLPGKR EMVKVKHHRD ADCVAMGYRI HKSGEGIGSI LLGLYRDDGE 250 260 270 280 290 300 LQMVGGAASF TAKARLKLLD DLEPLRIGDD LRDGEPSRWN SAADKRWIPV RPERVCEVAY 310 320 330 340 350 DQMEGNTEHG RRFRHAVKFL RWRPDRDPQS CTFDQLDVPL HFDLYDVLER S

References

[1]

"Complete sequence of chromosome of Mycobacterium sp. Spyr1." US DOE Joint Genome Institute Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., Pitluck S., LaButti K., Ivanova N.M., Mikhailova N.M., Land M., Hauser L., Koukkou A.I., Drainas C., Kyrpides N., Woyke T. Submitted (DEC-2010) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Spyr1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002385 Genomic DNA. Translation: ADU01445.1.
RefSeq	YP_004079279.1. NC_014814.1.
3D structure databases
ProteinModelPortal	E6TKH9.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ADU01445; ADU01445; Mspyr1_49100.
GeneID	10049298.
KEGG	msp:Mspyr1_49100.
PATRIC	45291053. VBIMycSp109077_5140.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000222508.
KO	K01971.
OMA	FRHAARF.
Enzyme and pathway databases
BioCyc	MSP278137:GHD6-4868-MONOMER.
Family and domain databases
Gene3D	2.40.50.140. 1 hit.
InterPro	IPR012309. DNA_ligase_ATP-dep_C. IPR012310. DNA_ligase_ATP-dep_cent. IPR016059. DNA_ligase_ATP-dep_CS. IPR012340. NA-bd_OB-fold. [Graphical view]
Pfam	PF04679. DNA_ligase_A_C. 1 hit. PF01068. DNA_ligase_A_M. 1 hit. [Graphical view]
SUPFAM	SSF50249. Nucleic_acid_OB. 1 hit.
PROSITE	PS00697. DNA_LIGASE_A1. 1 hit. PS50160. DNA_LIGASE_A3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

E6TKH9_MYCSR

Accession

Primary (citable) accession number: E6TKH9

Entry history

Integrated into UniProtKB/TrEMBL:	March 8, 2011
Last sequence update:	March 8, 2011
Last modified:	May 1, 2013
This is version 15 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)