Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Basket 0
(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

E6TKH9

- E6TKH9_MYCSR

UniProt

E6TKH9 - E6TKH9_MYCSR

Protein
Submitted name:

ATP-dependent DNA ligase

Gene

Mspyr1_49100

Organism
Mycobacterium sp. (strain Spyr1)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
    • BLAST
    • Align
    • Format
    • Add to basket
    • History
      Entry version 17 (01 Oct 2014)
      Sequence version 1 (08 Mar 2011)
      Previous versions | rss
    • Help video
    • Feedback
    • Comment

    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA ligation involved in DNA repair Source: InterPro
    2. DNA recombination Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciMSP278137:GHD6-4868-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    ATP-dependent DNA ligaseImported
    Gene namesi
    Ordered Locus Names:Mspyr1_49100Imported
    OrganismiMycobacterium sp. (strain Spyr1)Imported
    Taxonomic identifieri278137 [NCBI]
    Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeMycobacteriaceaeMycobacterium
    ProteomesiUP000008916: Chromosome

    Structurei

    3D structure databases

    ProteinModelPortaliE6TKH9.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    HOGENOMiHOG000222508.
    KOiK01971.
    OMAiYRPHKSQ.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    E6TKH9-1 [UniParc]FASTAAdd to Basket

    « Hide

    MEAVDLPVRP PLEPMLAKAQ AKVPDDPGVW SYEPKWDGFR ALVFRDGDDV    50
    VLLSRSGKDL GRYFPEVLDA VRDELAPHCV LDGEIVVPRE IGGRMRLDWE 100
    SLSQRIHPAE SRITLLSEQT PAHFIGFDAL ALGDTPLMKE PFRTRREALI 150
    DAVTPKQWCH VTRTTEDPQL GTQWLDEFEG AGLDGVIAKR LDGPYLPGKR 200
    EMVKVKHHRD ADCVAMGYRI HKSGEGIGSI LLGLYRDDGE LQMVGGAASF 250
    TAKARLKLLD DLEPLRIGDD LRDGEPSRWN SAADKRWIPV RPERVCEVAY 300
    DQMEGNTEHG RRFRHAVKFL RWRPDRDPQS CTFDQLDVPL HFDLYDVLER 350
    S 351
    Length:351
    Mass (Da):39,837
    Last modified:March 8, 2011 - v1
    Checksum:iEDC9807FBF085B83
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002385 Genomic DNA. Translation: ADU01445.1.
    RefSeqiYP_004079279.1. NC_014814.1.

    Genome annotation databases

    EnsemblBacteriaiADU01445; ADU01445; Mspyr1_49100.
    GeneIDi10049298.
    KEGGimsp:Mspyr1_49100.
    PATRICi45291053. VBIMycSp109077_5140.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002385 Genomic DNA. Translation: ADU01445.1 .
    RefSeqi YP_004079279.1. NC_014814.1.

    3D structure databases

    ProteinModelPortali E6TKH9.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ADU01445 ; ADU01445 ; Mspyr1_49100 .
    GeneIDi 10049298.
    KEGGi msp:Mspyr1_49100.
    PATRICi 45291053. VBIMycSp109077_5140.

    Phylogenomic databases

    HOGENOMi HOG000222508.
    KOi K01971.
    OMAi YRPHKSQ.

    Enzyme and pathway databases

    BioCyci MSP278137:GHD6-4868-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Complete sequence of chromosome of Mycobacterium sp. Spyr1."
      US DOE Joint Genome Institute
      Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., Pitluck S., LaButti K., Ivanova N.M., Mikhailova N.M., Land M., Hauser L., Koukkou A.I., Drainas C., Kyrpides N., Woyke T.
      Submitted (DEC-2010) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: Spyr1Imported.

    Entry informationi

    Entry nameiE6TKH9_MYCSR
    AccessioniPrimary (citable) accession number: E6TKH9
    Entry historyi
    Integrated into UniProtKB/TrEMBL: March 8, 2011
    Last sequence update: March 8, 2011
    Last modified: October 1, 2014
    This is version 17 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3