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E6TKH9 (E6TKH9_MYCSR) Unreviewed, UniProtKB/TrEMBL

Last modified October 16, 2013. Version 16. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Mspyr1_49100 EMBL ADU01445.1
OrganismMycobacterium sp. (strain Spyr1) [Complete proteome] [HAMAP] EMBL ADU01445.1
Taxonomic identifier278137 [NCBI]
Taxonomic lineageBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeMycobacteriaceaeMycobacterium

Protein attributes

Sequence length351 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Sequences

Sequence LengthMass (Da)Tools
E6TKH9 [UniParc].

Last modified March 8, 2011. Version 1.
Checksum: EDC9807FBF085B83

FASTA35139,837
        10         20         30         40         50         60 
MEAVDLPVRP PLEPMLAKAQ AKVPDDPGVW SYEPKWDGFR ALVFRDGDDV VLLSRSGKDL 

        70         80         90        100        110        120 
GRYFPEVLDA VRDELAPHCV LDGEIVVPRE IGGRMRLDWE SLSQRIHPAE SRITLLSEQT 

       130        140        150        160        170        180 
PAHFIGFDAL ALGDTPLMKE PFRTRREALI DAVTPKQWCH VTRTTEDPQL GTQWLDEFEG 

       190        200        210        220        230        240 
AGLDGVIAKR LDGPYLPGKR EMVKVKHHRD ADCVAMGYRI HKSGEGIGSI LLGLYRDDGE 

       250        260        270        280        290        300 
LQMVGGAASF TAKARLKLLD DLEPLRIGDD LRDGEPSRWN SAADKRWIPV RPERVCEVAY 

       310        320        330        340        350 
DQMEGNTEHG RRFRHAVKFL RWRPDRDPQS CTFDQLDVPL HFDLYDVLER S 

« Hide

References

[1]"Complete sequence of chromosome of Mycobacterium sp. Spyr1."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., Pitluck S., LaButti K., Ivanova N.M., Mikhailova N.M., Land M., Hauser L., Koukkou A.I., Drainas C., Kyrpides N., Woyke T.
Submitted (DEC-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Spyr1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002385 Genomic DNA. Translation: ADU01445.1.
RefSeqYP_004079279.1. NC_014814.1.

3D structure databases

ProteinModelPortalE6TKH9.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADU01445; ADU01445; Mspyr1_49100.
GeneID10049298.
KEGGmsp:Mspyr1_49100.
PATRIC45291053. VBIMycSp109077_5140.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000222508.
KOK01971.
OMAYRPHKSQ.

Enzyme and pathway databases

BioCycMSP278137:GHD6-4868-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
PROSITEPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameE6TKH9_MYCSR
AccessionPrimary (citable) accession number: E6TKH9
Entry history
Integrated into UniProtKB/TrEMBL: March 8, 2011
Last sequence update: March 8, 2011
Last modified: October 16, 2013
This is version 16 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)