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E6TDE0 (E6TDE0_MYCSR) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 16. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Glutamate decarboxylase EMBL ADU00909.1
EC=4.1.1.15 EMBL ADU00909.1
Gene names
Ordered Locus Names:Mspyr1_43520 EMBL ADU00909.1
OrganismMycobacterium sp. (strain Spyr1) [Complete proteome] [HAMAP] EMBL ADU00909.1
Taxonomic identifier278137 [NCBI]
Taxonomic lineageBacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Corynebacterineae › Mycobacteriaceae › Mycobacterium ›

Protein attributes

Sequence length468 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU000382

Sequence similarities

Belongs to the group II decarboxylase family. RuleBase RU000382

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2525 Potential EMBL ADU00909.1
Chain26 – 468443 Potential
PRO_5000672037

Sequences

Sequence LengthMass (Da)Tools
E6TDE0 [UniParc].

Last modified March 8, 2011. Version 1.
Checksum: F8B73400E0062D48

FASTA46851,707
        10         20         30         40         50         60 
MPNVSRHSSL APAYTGRMSM SPVPALRLPD ESMEPEQAYR FIHDELMLDG SSRLNLATFV 

        70         80         90        100        110        120 
TTWMDPEAGQ LMSETFDKNM IDKDEYPVTA AIEQRCVCMV ADLFHAENLR DDDPSTAIGV 

       130        140        150        160        170        180 
STVGSSEAVM LAGLAMKWRW RDKFAGKDGD GWKGRTPNLV MGSNVQVVWE KFCRYFDVEA 

       190        200        210        220        230        240 
RYLPMEKGRY VITPEQVLDA VDEDTIGVVA ILGTTFTGEL EPVAEICAAL DALAAGGGCD 

       250        260        270        280        290        300 
VPVHVDAASG GFVVPFLNPL LVWDFRLPRV VSINVSGHKY GLTYPGIGFV VWRNAEHLPE 

       310        320        330        340        350        360 
DLVFRVNYLG GDMPTFTLNF SRPGNQVVGQ YYNFLRLGRD GYTQVMHALA DTAQWLAREL 

       370        380        390        400        410        420 
EGMTGSDHKP VFEVITDGSA IPVVAFRLTE GAKFTVFDIS ALLRSYGWQV PAYTMPEDAT 

       430        440        450        460 
DIAVLRIVVR EGFSANLARA LRDDLREVLG KLDKVGIGGF SDEEHFAH

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References

[1]"Complete sequence of chromosome of Mycobacterium sp. Spyr1."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., Pitluck S., LaButti K., Ivanova N.M., Mikhailova N.M., Land M., Hauser L., Koukkou A.I., Drainas C., Kyrpides N., Woyke T.
Submitted (DEC-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Spyr1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP002385 Genomic DNA. Translation: ADU00909.1.
RefSeqYP_004078743.1. NC_014814.1.

3D structure databases

ProteinModelPortalE6TDE0.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADU00909; ADU00909; Mspyr1_43520.
GeneID10048741.
KEGGmsp:Mspyr1_43520.
PATRIC45289909. VBIMycSp109077_4578.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000070228.
KOK01580.
OMAIELREVP.

Enzyme and pathway databases

BioCycMSP278137:GHD6-4313-MONOMER.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
InterProIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMSSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
TIGRFAMsTIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNetSearch...

Entry information

Entry nameE6TDE0_MYCSR
AccessionPrimary (citable) accession number: E6TDE0
Entry history
Integrated into UniProtKB/TrEMBL: March 8, 2011
Last sequence update: March 8, 2011
Last modified: May 1, 2013
This is version 16 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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