Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

E6TDE0

- E6TDE0_MYCSR

UniProt

E6TDE0 - E6TDE0_MYCSR

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein

Glutamate decarboxylase

Gene

Mspyr1_43520

Organism
Mycobacterium sp. (strain Spyr1)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Catalytic activityi

L-glutamate = 4-aminobutanoate + CO2.UniRule annotation

Cofactori

Pyridoxal phosphate.UniRule annotation

GO - Molecular functioni

  1. glutamate decarboxylase activity Source: UniProtKB-EC
  2. pyridoxal phosphate binding Source: InterPro

GO - Biological processi

  1. glutamate metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

DecarboxylaseUniRule annotation, Lyase

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Enzyme and pathway databases

BioCyciMSP278137:GHD6-4313-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Glutamate decarboxylaseUniRule annotation (EC:4.1.1.15UniRule annotation)
Gene namesi
Ordered Locus Names:Mspyr1_43520Imported
OrganismiMycobacterium sp. (strain Spyr1)Imported
Taxonomic identifieri278137 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeMycobacteriaceaeMycobacterium
ProteomesiUP000008916: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2525 PotentialImportedAdd
BLAST
Chaini26 – 468443 PotentialPRO_5000672037Add
BLAST

Structurei

3D structure databases

ProteinModelPortaliE6TDE0.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the group II decarboxylase family.UniRule annotation

Keywords - Domaini

SignalImported

Phylogenomic databases

HOGENOMiHOG000070228.
KOiK01580.
OMAiPTFQINF.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERiPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

E6TDE0-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MPNVSRHSSL APAYTGRMSM SPVPALRLPD ESMEPEQAYR FIHDELMLDG
60 70 80 90 100
SSRLNLATFV TTWMDPEAGQ LMSETFDKNM IDKDEYPVTA AIEQRCVCMV
110 120 130 140 150
ADLFHAENLR DDDPSTAIGV STVGSSEAVM LAGLAMKWRW RDKFAGKDGD
160 170 180 190 200
GWKGRTPNLV MGSNVQVVWE KFCRYFDVEA RYLPMEKGRY VITPEQVLDA
210 220 230 240 250
VDEDTIGVVA ILGTTFTGEL EPVAEICAAL DALAAGGGCD VPVHVDAASG
260 270 280 290 300
GFVVPFLNPL LVWDFRLPRV VSINVSGHKY GLTYPGIGFV VWRNAEHLPE
310 320 330 340 350
DLVFRVNYLG GDMPTFTLNF SRPGNQVVGQ YYNFLRLGRD GYTQVMHALA
360 370 380 390 400
DTAQWLAREL EGMTGSDHKP VFEVITDGSA IPVVAFRLTE GAKFTVFDIS
410 420 430 440 450
ALLRSYGWQV PAYTMPEDAT DIAVLRIVVR EGFSANLARA LRDDLREVLG
460
KLDKVGIGGF SDEEHFAH
Length:468
Mass (Da):51,707
Last modified:March 8, 2011 - v1
Checksum:iF8B73400E0062D48
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002385 Genomic DNA. Translation: ADU00909.1.
RefSeqiYP_004078743.1. NC_014814.1.

Genome annotation databases

EnsemblBacteriaiADU00909; ADU00909; Mspyr1_43520.
GeneIDi10048741.
KEGGimsp:Mspyr1_43520.
PATRICi45289909. VBIMycSp109077_4578.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002385 Genomic DNA. Translation: ADU00909.1 .
RefSeqi YP_004078743.1. NC_014814.1.

3D structure databases

ProteinModelPortali E6TDE0.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ADU00909 ; ADU00909 ; Mspyr1_43520 .
GeneIDi 10048741.
KEGGi msp:Mspyr1_43520.
PATRICi 45289909. VBIMycSp109077_4578.

Phylogenomic databases

HOGENOMi HOG000070228.
KOi K01580.
OMAi PTFQINF.

Enzyme and pathway databases

BioCyci MSP278137:GHD6-4313-MONOMER.

Family and domain databases

Gene3Di 3.40.640.10. 1 hit.
InterProi IPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view ]
PANTHERi PTHR11999:SF1. PTHR11999:SF1. 1 hit.
Pfami PF00282. Pyridoxal_deC. 1 hit.
[Graphical view ]
SUPFAMi SSF53383. SSF53383. 1 hit.
TIGRFAMsi TIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Complete sequence of chromosome of Mycobacterium sp. Spyr1."
    US DOE Joint Genome Institute
    Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., Pitluck S., LaButti K., Ivanova N.M., Mikhailova N.M., Land M., Hauser L., Koukkou A.I., Drainas C., Kyrpides N., Woyke T.
    Submitted (DEC-2010) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Spyr1Imported.

Entry informationi

Entry nameiE6TDE0_MYCSR
AccessioniPrimary (citable) accession number: E6TDE0
Entry historyi
Integrated into UniProtKB/TrEMBL: March 8, 2011
Last sequence update: March 8, 2011
Last modified: October 29, 2014
This is version 21 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3