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E6TDE0

- E6TDE0_MYCSR

UniProt

E6TDE0 - E6TDE0_MYCSR

Protein

Glutamate decarboxylase

Gene

Mspyr1_43520

Organism
Mycobacterium sp. (strain Spyr1)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 20 (01 Oct 2014)
      Sequence version 1 (08 Mar 2011)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    L-glutamate = 4-aminobutanoate + CO2.UniRule annotation

    Cofactori

    Pyridoxal phosphate.UniRule annotation

    GO - Molecular functioni

    1. glutamate decarboxylase activity Source: UniProtKB-EC
    2. pyridoxal phosphate binding Source: InterPro

    GO - Biological processi

    1. glutamate metabolic process Source: InterPro

    Keywords - Molecular functioni

    DecarboxylaseUniRule annotation, Lyase

    Keywords - Ligandi

    Pyridoxal phosphateUniRule annotation

    Enzyme and pathway databases

    BioCyciMSP278137:GHD6-4313-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Glutamate decarboxylaseUniRule annotation (EC:4.1.1.15UniRule annotation)
    Gene namesi
    Ordered Locus Names:Mspyr1_43520Imported
    OrganismiMycobacterium sp. (strain Spyr1)Imported
    Taxonomic identifieri278137 [NCBI]
    Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeMycobacteriaceaeMycobacterium
    ProteomesiUP000008916: Chromosome

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Signal peptidei1 – 2525 PotentialImportedAdd
    BLAST
    Chaini26 – 468443 PotentialPRO_5000672037Add
    BLAST

    Structurei

    3D structure databases

    ProteinModelPortaliE6TDE0.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the group II decarboxylase family.UniRule annotation

    Keywords - Domaini

    SignalImported

    Phylogenomic databases

    HOGENOMiHOG000070228.
    KOiK01580.
    OMAiPTFQINF.

    Family and domain databases

    Gene3Di3.40.640.10. 1 hit.
    InterProiIPR010107. Glutamate_decarboxylase.
    IPR002129. PyrdxlP-dep_de-COase.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    [Graphical view]
    PANTHERiPTHR11999:SF1. PTHR11999:SF1. 1 hit.
    PfamiPF00282. Pyridoxal_deC. 1 hit.
    [Graphical view]
    SUPFAMiSSF53383. SSF53383. 1 hit.
    TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    E6TDE0-1 [UniParc]FASTAAdd to Basket

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    MPNVSRHSSL APAYTGRMSM SPVPALRLPD ESMEPEQAYR FIHDELMLDG    50
    SSRLNLATFV TTWMDPEAGQ LMSETFDKNM IDKDEYPVTA AIEQRCVCMV 100
    ADLFHAENLR DDDPSTAIGV STVGSSEAVM LAGLAMKWRW RDKFAGKDGD 150
    GWKGRTPNLV MGSNVQVVWE KFCRYFDVEA RYLPMEKGRY VITPEQVLDA 200
    VDEDTIGVVA ILGTTFTGEL EPVAEICAAL DALAAGGGCD VPVHVDAASG 250
    GFVVPFLNPL LVWDFRLPRV VSINVSGHKY GLTYPGIGFV VWRNAEHLPE 300
    DLVFRVNYLG GDMPTFTLNF SRPGNQVVGQ YYNFLRLGRD GYTQVMHALA 350
    DTAQWLAREL EGMTGSDHKP VFEVITDGSA IPVVAFRLTE GAKFTVFDIS 400
    ALLRSYGWQV PAYTMPEDAT DIAVLRIVVR EGFSANLARA LRDDLREVLG 450
    KLDKVGIGGF SDEEHFAH 468
    Length:468
    Mass (Da):51,707
    Last modified:March 8, 2011 - v1
    Checksum:iF8B73400E0062D48
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002385 Genomic DNA. Translation: ADU00909.1.
    RefSeqiWP_011895765.1. NC_014814.1.
    YP_004078743.1. NC_014814.1.

    Genome annotation databases

    EnsemblBacteriaiADU00909; ADU00909; Mspyr1_43520.
    GeneIDi10048741.
    KEGGimsp:Mspyr1_43520.
    PATRICi45289909. VBIMycSp109077_4578.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002385 Genomic DNA. Translation: ADU00909.1 .
    RefSeqi WP_011895765.1. NC_014814.1.
    YP_004078743.1. NC_014814.1.

    3D structure databases

    ProteinModelPortali E6TDE0.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ADU00909 ; ADU00909 ; Mspyr1_43520 .
    GeneIDi 10048741.
    KEGGi msp:Mspyr1_43520.
    PATRICi 45289909. VBIMycSp109077_4578.

    Phylogenomic databases

    HOGENOMi HOG000070228.
    KOi K01580.
    OMAi PTFQINF.

    Enzyme and pathway databases

    BioCyci MSP278137:GHD6-4313-MONOMER.

    Family and domain databases

    Gene3Di 3.40.640.10. 1 hit.
    InterProi IPR010107. Glutamate_decarboxylase.
    IPR002129. PyrdxlP-dep_de-COase.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    [Graphical view ]
    PANTHERi PTHR11999:SF1. PTHR11999:SF1. 1 hit.
    Pfami PF00282. Pyridoxal_deC. 1 hit.
    [Graphical view ]
    SUPFAMi SSF53383. SSF53383. 1 hit.
    TIGRFAMsi TIGR01788. Glu-decarb-GAD. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Complete sequence of chromosome of Mycobacterium sp. Spyr1."
      US DOE Joint Genome Institute
      Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., Pitluck S., LaButti K., Ivanova N.M., Mikhailova N.M., Land M., Hauser L., Koukkou A.I., Drainas C., Kyrpides N., Woyke T.
      Submitted (DEC-2010) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: Spyr1Imported.

    Entry informationi

    Entry nameiE6TDE0_MYCSR
    AccessioniPrimary (citable) accession number: E6TDE0
    Entry historyi
    Integrated into UniProtKB/TrEMBL: March 8, 2011
    Last sequence update: March 8, 2011
    Last modified: October 1, 2014
    This is version 20 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3