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Protein
Submitted name:

4-aminobutyrate aminotransferase apoenzyme

Gene

Mspyr1_31600

Organism
Mycobacterium sp. (strain Spyr1)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

AminotransferaseImported, Transferase

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Enzyme and pathway databases

BioCyciMSP278137:GHD6-3140-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
4-aminobutyrate aminotransferase apoenzymeImported (EC:2.6.1.19Imported)
Gene namesi
Ordered Locus Names:Mspyr1_31600Imported
OrganismiMycobacterium sp. (strain Spyr1)Imported
Taxonomic identifieri278137 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaCorynebacterialesMycobacteriaceaeMycobacterium
ProteomesiUP000008916 Componenti: Chromosome

Structurei

3D structure databases

ProteinModelPortaliE6TD68.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000020206.
KOiK07250.
OMAiCGKAEIM.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR004632. 4NH2But_aminotransferase_bac.
IPR005814. Aminotrans_3.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PANTHERiPTHR11986. PTHR11986. 1 hit.
PfamiPF00202. Aminotran_3. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR00700. GABAtrnsam. 1 hit.
PROSITEiPS00600. AA_TRANSFER_CLASS_3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

E6TD68-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSALEQSRHL ATAIPGPRSV ELASRKNTAV SRGVGTTMPV YAARAFGGIV
60 70 80 90 100
EDVDGNRLID LGSGIAVTTV GNASPRVVAA VAEQAAEFTH TCFMVTPYEG
110 120 130 140 150
YVAVAEALNR LTPGDGDKRS ALFNSGSEAV ENAVKIARTF TRKQAVVSFD
160 170 180 190 200
HAYHGRTNLT MALTAKSMPY KHGFGPFAPE IYRAPMSYPF RDAEFGGKEL
210 220 230 240 250
ATDGELAARR AITVIDKQVG AGNLAAVIIE PIQGEGGFIV PAEGFLPTLL
260 270 280 290 300
DWCRANDVVF IADEVQTGFA RTGAMFACEH EGPDGLVPDL IVTAKGIAGG
310 320 330 340 350
MPLSAVTGRA DIMDAPHVSG LGGTYGGNPV ACAAALATIE TIESDNLVAR
360 370 380 390 400
AAQIEALMKD RLGRMQAEDD RIGDVRGRGA MIAVELVKSG TLEPDPELTR
410 420 430 440 450
KLLTAAHAAG VIVLSCGTFG NVLRFLPPLA ISDDLLLEGL DILELILRDL
Length:450
Mass (Da):47,299
Last modified:March 8, 2011 - v1
Checksum:i96B04E3E2C79025D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002385 Genomic DNA. Translation: ADT99776.1.
RefSeqiWP_011894670.1. NC_014814.1.
YP_004077611.1. NC_014814.1.

Genome annotation databases

EnsemblBacteriaiADT99776; ADT99776; Mspyr1_31600.
KEGGimsp:Mspyr1_31600.
PATRICi45287489. VBIMycSp109077_3389.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002385 Genomic DNA. Translation: ADT99776.1.
RefSeqiWP_011894670.1. NC_014814.1.
YP_004077611.1. NC_014814.1.

3D structure databases

ProteinModelPortaliE6TD68.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADT99776; ADT99776; Mspyr1_31600.
KEGGimsp:Mspyr1_31600.
PATRICi45287489. VBIMycSp109077_3389.

Phylogenomic databases

HOGENOMiHOG000020206.
KOiK07250.
OMAiCGKAEIM.

Enzyme and pathway databases

BioCyciMSP278137:GHD6-3140-MONOMER.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR004632. 4NH2But_aminotransferase_bac.
IPR005814. Aminotrans_3.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PANTHERiPTHR11986. PTHR11986. 1 hit.
PfamiPF00202. Aminotran_3. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR00700. GABAtrnsam. 1 hit.
PROSITEiPS00600. AA_TRANSFER_CLASS_3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Complete sequence of chromosome of Mycobacterium sp. Spyr1."
    US DOE Joint Genome Institute
    Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., Pitluck S., LaButti K., Ivanova N.M., Mikhailova N.M., Land M., Hauser L., Koukkou A.I., Drainas C., Kyrpides N., Woyke T.
    Submitted (DEC-2010) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Spyr1Imported.

Entry informationi

Entry nameiE6TD68_MYCSR
AccessioniPrimary (citable) accession number: E6TD68
Entry historyi
Integrated into UniProtKB/TrEMBL: March 8, 2011
Last sequence update: March 8, 2011
Last modified: June 24, 2015
This is version 25 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.