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E6T6V5 (E6T6V5_SHEB6) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 20. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=6.5.1.1 EMBL ADT94086.1
Gene names
Ordered Locus Names:Sbal678_1925 EMBL ADT94086.1
OrganismShewanella baltica (strain OS678) [Complete proteome] [HAMAP] EMBL ADT94086.1
Taxonomic identifier693973 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella

Protein attributes

Sequence length315 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

Ontologies

Keywords
   DomainSignal EMBL ADT94086.1
   Molecular functionLigase EMBL ADT94086.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processDNA recombination

Inferred from electronic annotation. Source: InterPro

DNA repair

Inferred from electronic annotation. Source: InterPro

   Molecular_functionATP binding

Inferred from electronic annotation. Source: InterPro

DNA ligase (ATP) activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 4343 Potential EMBL ADT94086.1
Chain44 – 315272 Potential EMBL ADT94086.1
PRO_5000671613

Sequences

Sequence LengthMass (Da)Tools
E6T6V5 [UniParc].

Last modified March 8, 2011. Version 1.
Checksum: EB1A5DBE4D1CBDB8

FASTA31535,416
        10         20         30         40         50         60 
MTHTSPLQDL TFHRFIRFRF FKQRLLLLSL LILGCLAPVT YAQNSPPSIQ LATEFDAQQE 

        70         80         90        100        110        120 
IHIQDFLVSE KLDGVRGYWN GQALLTRQGN LIAAPTWFIA NFPNYPLDGE LWLGRGQFEA 

       130        140        150        160        170        180 
MSSIVRQTSA KDDDWRKVRF MVFDVPKAGG DFQHRYQFAL TKLSGKSHYL EVIAQFQVDS 

       190        200        210        220        230        240 
LEALYQKLDS LVAKGAEGLM LHRSSAMYVS GRNPNLMKLK PYYDAEATVI GHIPGKGQFA 

       250        260        270        280        290        300 
GQMGAIRVQT PDGRIFNIGT GFNLAERQHP PAVGAIITYK YLGLTVNGLP RFASFLRVRI 

       310 
DLDESNKVIS SQEGN 

« Hide

References

[1]"Complete sequence of chromosome of Shewanella baltica OS678."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., Pitluck S., Teshima H., Detter J.C., Han C., Tapia R., Land M., Hauser L., Jeffries C., Kyrpides N., Ivanova N., Ovchinnikova G., Konstantinidis K. expand/collapse author list , Deng J.I., Hofle M., Brettar I., Tiedje J., Auchtung J., Woyke T.
Submitted (DEC-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: OS678 EMBL ADT94086.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002383 Genomic DNA. Translation: ADT94086.1.
RefSeqYP_005273138.1. NC_016901.1.

3D structure databases

ProteinModelPortalE6T6V5.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADT94086; ADT94086; Sbal678_1925.
GeneID11774727.
KEGGsbt:Sbal678_1925.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01971.
OMAGKGQFEN.

Enzyme and pathway databases

BioCycSBAL693973:GJDB-1972-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012310. DNA_ligase_ATP-dep_cent.
IPR029319. DNA_ligase_OB.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF01068. DNA_ligase_A_M. 1 hit.
PF14743. DNA_ligase_OB_2. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
ProtoNetSearch...

Entry information

Entry nameE6T6V5_SHEB6
AccessionPrimary (citable) accession number: E6T6V5
Entry history
Integrated into UniProtKB/TrEMBL: March 8, 2011
Last sequence update: March 8, 2011
Last modified: June 11, 2014
This is version 20 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)