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E6T6V5

- E6T6V5_SHEB6

UniProt

E6T6V5 - E6T6V5_SHEB6

Protein
Submitted name:

DNA ligase (ATP)

Gene

Sbal678_1925

Organism
Shewanella baltica (strain OS678)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 21 (01 Oct 2014)
      Sequence version 1 (08 Mar 2011)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: UniProtKB-EC

    GO - Biological processi

    1. DNA recombination Source: InterPro
    2. DNA repair Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciSBAL693973:GJDB-1972-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    DNA ligase (ATP)Imported (EC:6.5.1.1Imported)
    Gene namesi
    Ordered Locus Names:Sbal678_1925Imported
    OrganismiShewanella baltica (strain OS678)Imported
    Taxonomic identifieri693973 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella
    ProteomesiUP000007240: Chromosome

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Signal peptidei1 – 4343 PotentialImportedAdd
    BLAST
    Chaini44 – 315272 PotentialImportedPRO_5000671613Add
    BLAST

    Structurei

    3D structure databases

    ProteinModelPortaliE6T6V5.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Keywords - Domaini

    SignalImported

    Phylogenomic databases

    KOiK01971.
    OMAiGKGQFEN.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012310. DNA_ligase_ATP-dep_cent.
    IPR029319. DNA_ligase_OB.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF01068. DNA_ligase_A_M. 1 hit.
    PF14743. DNA_ligase_OB_2. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    E6T6V5-1 [UniParc]FASTAAdd to Basket

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    MTHTSPLQDL TFHRFIRFRF FKQRLLLLSL LILGCLAPVT YAQNSPPSIQ    50
    LATEFDAQQE IHIQDFLVSE KLDGVRGYWN GQALLTRQGN LIAAPTWFIA 100
    NFPNYPLDGE LWLGRGQFEA MSSIVRQTSA KDDDWRKVRF MVFDVPKAGG 150
    DFQHRYQFAL TKLSGKSHYL EVIAQFQVDS LEALYQKLDS LVAKGAEGLM 200
    LHRSSAMYVS GRNPNLMKLK PYYDAEATVI GHIPGKGQFA GQMGAIRVQT 250
    PDGRIFNIGT GFNLAERQHP PAVGAIITYK YLGLTVNGLP RFASFLRVRI 300
    DLDESNKVIS SQEGN 315
    Length:315
    Mass (Da):35,416
    Last modified:March 8, 2011 - v1
    Checksum:iEB1A5DBE4D1CBDB8
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002383 Genomic DNA. Translation: ADT94086.1.
    RefSeqiYP_005273138.1. NC_016901.1.

    Genome annotation databases

    EnsemblBacteriaiADT94086; ADT94086; Sbal678_1925.
    GeneIDi11774727.
    KEGGisbt:Sbal678_1925.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002383 Genomic DNA. Translation: ADT94086.1 .
    RefSeqi YP_005273138.1. NC_016901.1.

    3D structure databases

    ProteinModelPortali E6T6V5.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ADT94086 ; ADT94086 ; Sbal678_1925 .
    GeneIDi 11774727.
    KEGGi sbt:Sbal678_1925.

    Phylogenomic databases

    KOi K01971.
    OMAi GKGQFEN.

    Enzyme and pathway databases

    BioCyci SBAL693973:GJDB-1972-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012310. DNA_ligase_ATP-dep_cent.
    IPR029319. DNA_ligase_OB.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF01068. DNA_ligase_A_M. 1 hit.
    PF14743. DNA_ligase_OB_2. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: OS678Imported.

    Entry informationi

    Entry nameiE6T6V5_SHEB6
    AccessioniPrimary (citable) accession number: E6T6V5
    Entry historyi
    Integrated into UniProtKB/TrEMBL: March 8, 2011
    Last sequence update: March 8, 2011
    Last modified: October 1, 2014
    This is version 21 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3