E6T6V5 (E6T6V5_SHEB6) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
DNA ligase (ATP) EMBL ADT94086.1
EC=6.5.1.1 EMBL ADT94086.1

Gene names

Ordered Locus Names:

Sbal678_1925 EMBL ADT94086.1

Organism

Shewanella baltica (strain OS678) [Complete proteome] [HAMAP] EMBL ADT94086.1

Taxonomic identifier

693973 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Alteromonadales › Shewanellaceae › Shewanella › Shewanella baltica

Protein attributes

Sequence length	315 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Predicted

Ontologies

Keywords
Domain	Signal EMBL ADT94086.1
Molecular function	Ligase EMBL ADT94086.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	DNA recombination Inferred from electronic annotation. Source: InterPro DNA repair Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: InterPro DNA ligase (ATP) activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 43	43	Potential EMBL ADT94086.1
	Chain	44 – 315	272	Potential		PRO_5000671613

Sequences

	Sequence		Length	Mass (Da)
	E6T6V5 [UniParc]. Last modified March 8, 2011. Version 1. Checksum: EB1A5DBE4D1CBDB8	FASTA	315	35,416
	10 20 30 40 50 60 MTHTSPLQDL TFHRFIRFRF FKQRLLLLSL LILGCLAPVT YAQNSPPSIQ LATEFDAQQE 70 80 90 100 110 120 IHIQDFLVSE KLDGVRGYWN GQALLTRQGN LIAAPTWFIA NFPNYPLDGE LWLGRGQFEA 130 140 150 160 170 180 MSSIVRQTSA KDDDWRKVRF MVFDVPKAGG DFQHRYQFAL TKLSGKSHYL EVIAQFQVDS 190 200 210 220 230 240 LEALYQKLDS LVAKGAEGLM LHRSSAMYVS GRNPNLMKLK PYYDAEATVI GHIPGKGQFA 250 260 270 280 290 300 GQMGAIRVQT PDGRIFNIGT GFNLAERQHP PAVGAIITYK YLGLTVNGLP RFASFLRVRI 310 DLDESNKVIS SQEGN

References

[1]

"Complete sequence of chromosome of Shewanella baltica OS678." US DOE Joint Genome Institute Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., Pitluck S., Teshima H., Detter J.C., Han C., Tapia R., Land M., Hauser L., Jeffries C., Kyrpides N., Ivanova N., Ovchinnikova G., Konstantinidis K. , Deng J.I., Hofle M., Brettar I., Tiedje J., Auchtung J., Woyke T. Submitted (DEC-2010) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: OS678 EMBL ADT94086.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002383 Genomic DNA. Translation: ADT94086.1.
RefSeq	YP_005273138.1. NC_016901.1.
3D structure databases
ProteinModelPortal	E6T6V5.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ADT94086; ADT94086; Sbal678_1925.
GeneID	11774727.
KEGG	sbt:Sbal678_1925.
Organism-specific databases
CMR	Search...
Phylogenomic databases
KO	K01971.
Family and domain databases
Gene3D	2.40.50.140. 1 hit.
InterPro	IPR012310. DNA_ligase_ATP-dep_cent. IPR012340. NA-bd_OB-fold. [Graphical view]
Pfam	PF01068. DNA_ligase_A_M. 1 hit. [Graphical view]
SUPFAM	SSF50249. Nucleic_acid_OB. 1 hit.
ProtoNet	Search...

Entry information

Entry name

E6T6V5_SHEB6

Accession

Primary (citable) accession number: E6T6V5

Entry history

Integrated into UniProtKB/TrEMBL:	March 8, 2011
Last sequence update:	March 8, 2011
Last modified:	May 1, 2013
This is version 14 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)