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Protein

30S ribosomal protein S5

Gene

rpsE

Organism
Bacteroides helcogenes (strain ATCC 35417 / DSM 20613 / JCM 6297 / P 36-108)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body.UniRule annotationSAAS annotation
With S4 and S12 plays an important role in translational accuracy.UniRule annotationSAAS annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal proteinUniRule annotationSAAS annotationImported, RNA-binding, rRNA-bindingUniRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Recommended name:
30S ribosomal protein S5UniRule annotationSAAS annotation
Gene namesi
Name:rpsEUniRule annotation
Ordered Locus Names:Bache_1073Imported
OrganismiBacteroides helcogenes (strain ATCC 35417 / DSM 20613 / JCM 6297 / P 36-108)Imported
Taxonomic identifieri693979 [NCBI]
Taxonomic lineageiBacteriaBacteroidetesBacteroidiaBacteroidalesBacteroidaceaeBacteroides
Proteomesi
  • UP000008630 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Interactioni

Subunit structurei

Part of the 30S ribosomal subunit. Contacts proteins S4 and S8.UniRule annotationSAAS annotation

Protein-protein interaction databases

STRINGi693979.Bache_1073

Structurei

3D structure databases

ProteinModelPortaliE6SRY1
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini16 – 79S5 DRBMInterPro annotationAdd BLAST64

Domaini

The N-terminal domain interacts with the head of the 30S subunit; the C-terminal domain interacts with the body and contacts protein S4. The interaction surface between S4 and S5 is involved in control of translational fidelity.UniRule annotation

Sequence similaritiesi

Belongs to the universal ribosomal protein uS5 family.UniRule annotationSAAS annotation

Phylogenomic databases

eggNOGiENOG4108RA9 Bacteria
COG0098 LUCA
HOGENOMiHOG000072595
KOiK02988
OMAiKRGCGSW
OrthoDBiPOG091H01QP

Family and domain databases

Gene3Di3.30.230.10, 1 hit
HAMAPiMF_01307_B Ribosomal_S5_B, 1 hit
InterProiView protein in InterPro
IPR000851 Ribosomal_S5
IPR005712 Ribosomal_S5_bac-type
IPR005324 Ribosomal_S5_C
IPR020568 Ribosomal_S5_D2-typ_fold
IPR014721 Ribosomal_S5_D2-typ_fold_subgr
IPR013810 Ribosomal_S5_N
IPR018192 Ribosomal_S5_N_CS
PANTHERiPTHR13718 PTHR13718, 1 hit
PfamiView protein in Pfam
PF00333 Ribosomal_S5, 1 hit
PF03719 Ribosomal_S5_C, 1 hit
SUPFAMiSSF54211 SSF54211, 1 hit
TIGRFAMsiTIGR01021 rpsE_bact, 1 hit
PROSITEiView protein in PROSITE
PS00585 RIBOSOMAL_S5, 1 hit
PS50881 S5_DSRBD, 1 hit

Sequencei

Sequence statusi: Complete.

E6SRY1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAGLNNRVKI TNDIELKDRL VAINRVTKVT KGGRTFSFSA IVVVGNEEGI
60 70 80 90 100
IGWGLGKAGE VTAAIAKGVE SAKKNLTKVP VLKGTVPHEQ SAKFGGAEVF
110 120 130 140 150
IKPASHGTGV VAGGAMRAVL ESVGVTDVLA KSKGSSNPHN LVKATILALS
160 170
EMRDARMVAQ NRGVSMEKVF RG
Length:172
Mass (Da):17,948
Last modified:March 8, 2011 - v1
Checksum:i43D714D6B7AA16F1
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002352 Genomic DNA Translation: ADV43083.1
RefSeqiWP_005656517.1, NC_014933.1

Genome annotation databases

EnsemblBacteriaiADV43083; ADV43083; Bache_1073
GeneIDi31797986
KEGGibhl:Bache_1073

Similar proteinsi

Entry informationi

Entry nameiE6SRY1_BACT6
AccessioniPrimary (citable) accession number: E6SRY1
Entry historyiIntegrated into UniProtKB/TrEMBL: March 8, 2011
Last sequence update: March 8, 2011
Last modified: May 23, 2018
This is version 52 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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