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E6SRY1

- E6SRY1_BACT6

UniProt

E6SRY1 - E6SRY1_BACT6

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Protein
30S ribosomal protein S5
Gene
rpsE, Bache_1073
Organism
Bacteroides helcogenes (strain ATCC 35417 / DSM 20613 / JCM 6297 / P 36-108)
Status
Unreviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body By similarity.UniRule annotationSAAS annotations
With S4 and S12 plays an important role in translational accuracy By similarity.UniRule annotationSAAS annotations

GO - Molecular functioni

  1. rRNA binding Source: UniProtKB-HAMAP
  2. structural constituent of ribosome Source: UniProtKB-HAMAP

GO - Biological processi

  1. translation Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal proteinUniRule annotationSAAS annotationsImported

Keywords - Ligandi

RNA-binding, rRNA-bindingUniRule annotationSAAS annotations

Enzyme and pathway databases

BioCyciBHEL693979:GHID-1103-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
30S ribosomal protein S5UniRule annotation
Gene namesi
Name:rpsEUniRule annotation
Ordered Locus Names:Bache_1073Imported
OrganismiBacteroides helcogenes (strain ATCC 35417 / DSM 20613 / JCM 6297 / P 36-108)Imported
Taxonomic identifieri693979 [NCBI]
Taxonomic lineageiBacteriaBacteroidetesBacteroidiaBacteroidalesBacteroidaceaeBacteroides
ProteomesiUP000008630: Chromosome

Subcellular locationi

GO - Cellular componenti

  1. small ribosomal subunit Source: InterPro
Complete GO annotation...

Interactioni

Subunit structurei

Part of the 30S ribosomal subunit. Contacts proteins S4 and S8 By similarity.UniRule annotationSAAS annotations

Structurei

3D structure databases

ProteinModelPortaliE6SRY1.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini16 – 7964S5 DRBM By similarityUniRule annotation
Add
BLAST

Domaini

The N-terminal domain interacts with the head of the 30S subunit; the C-terminal domain interacts with the body and contacts protein S4. The interaction surface between S4 and S5 is involved in control of translational fidelity By similarity.UniRule annotation

Sequence similaritiesi

Contains 1 S5 DRBM domain.UniRule annotation
Contains S5 DRBM domain.SAAS annotations
Contains SDRBM domain.

Phylogenomic databases

HOGENOMiHOG000072595.
KOiK02988.
OMAiGRRIMAF.

Family and domain databases

Gene3Di3.30.160.20. 1 hit.
3.30.230.10. 1 hit.
HAMAPiMF_01307_B. Ribosomal_S5_B.
InterProiIPR014720. dsRNA-bd_dom.
IPR000851. Ribosomal_S5.
IPR005712. Ribosomal_S5_bac-type.
IPR005324. Ribosomal_S5_C.
IPR020568. Ribosomal_S5_D2-typ_fold.
IPR014721. Ribosomal_S5_D2-typ_fold_subgr.
IPR013810. Ribosomal_S5_N.
IPR018192. Ribosomal_S5_N_CS.
[Graphical view]
PANTHERiPTHR13718. PTHR13718. 1 hit.
PfamiPF00333. Ribosomal_S5. 1 hit.
PF03719. Ribosomal_S5_C. 1 hit.
[Graphical view]
SUPFAMiSSF54211. SSF54211. 1 hit.
TIGRFAMsiTIGR01021. rpsE_bact. 1 hit.
PROSITEiPS00585. RIBOSOMAL_S5. 1 hit.
PS50881. S5_DSRBD. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

E6SRY1-1 [UniParc]FASTAAdd to Basket

« Hide

MAGLNNRVKI TNDIELKDRL VAINRVTKVT KGGRTFSFSA IVVVGNEEGI    50
IGWGLGKAGE VTAAIAKGVE SAKKNLTKVP VLKGTVPHEQ SAKFGGAEVF 100
IKPASHGTGV VAGGAMRAVL ESVGVTDVLA KSKGSSNPHN LVKATILALS 150
EMRDARMVAQ NRGVSMEKVF RG 172
Length:172
Mass (Da):17,948
Last modified:March 8, 2011 - v1
Checksum:i43D714D6B7AA16F1
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002352 Genomic DNA. Translation: ADV43083.1.
RefSeqiYP_004160669.1. NC_014933.1.

Genome annotation databases

EnsemblBacteriaiADV43083; ADV43083; Bache_1073.
GeneIDi10139826.
KEGGibhl:Bache_1073.
PATRICi45172620. VBIBacHel147569_1140.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002352 Genomic DNA. Translation: ADV43083.1 .
RefSeqi YP_004160669.1. NC_014933.1.

3D structure databases

ProteinModelPortali E6SRY1.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ADV43083 ; ADV43083 ; Bache_1073 .
GeneIDi 10139826.
KEGGi bhl:Bache_1073.
PATRICi 45172620. VBIBacHel147569_1140.

Phylogenomic databases

HOGENOMi HOG000072595.
KOi K02988.
OMAi GRRIMAF.

Enzyme and pathway databases

BioCyci BHEL693979:GHID-1103-MONOMER.

Family and domain databases

Gene3Di 3.30.160.20. 1 hit.
3.30.230.10. 1 hit.
HAMAPi MF_01307_B. Ribosomal_S5_B.
InterProi IPR014720. dsRNA-bd_dom.
IPR000851. Ribosomal_S5.
IPR005712. Ribosomal_S5_bac-type.
IPR005324. Ribosomal_S5_C.
IPR020568. Ribosomal_S5_D2-typ_fold.
IPR014721. Ribosomal_S5_D2-typ_fold_subgr.
IPR013810. Ribosomal_S5_N.
IPR018192. Ribosomal_S5_N_CS.
[Graphical view ]
PANTHERi PTHR13718. PTHR13718. 1 hit.
Pfami PF00333. Ribosomal_S5. 1 hit.
PF03719. Ribosomal_S5_C. 1 hit.
[Graphical view ]
SUPFAMi SSF54211. SSF54211. 1 hit.
TIGRFAMsi TIGR01021. rpsE_bact. 1 hit.
PROSITEi PS00585. RIBOSOMAL_S5. 1 hit.
PS50881. S5_DSRBD. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: P 36-108.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 35417 / DSM 20613 / JCM 6297 / P 36-108.

Entry informationi

Entry nameiE6SRY1_BACT6
AccessioniPrimary (citable) accession number: E6SRY1
Entry historyi
Integrated into UniProtKB/TrEMBL: March 8, 2011
Last sequence update: March 8, 2011
Last modified: May 14, 2014
This is version 21 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

Similar proteinsi