E6SBC1 (E6SBC1_INTC7) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
DNA polymerase LigD, polymerase domain protein EMBL ADU48409.1

Gene names

Ordered Locus Names:

Intca_1898

Organism

Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 / NBRC 12989 / 7 KIP) [Complete proteome] [HAMAP] EMBL ADU48409.1

Taxonomic identifier

710696 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Actinobacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Micrococcineae › Intrasporangiaceae › Intrasporangium › Intrasporangium calvum

Protein attributes

Sequence length	322 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Molecular_function	DNA primase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	E6SBC1 [UniParc]. Last modified March 8, 2011. Version 1. Checksum: 9F6EAB6513D07A3A	FASTA	322	36,261
	10 20 30 40 50 60 MAAAKQTPAL VLDVDGYDVR LTNPDRVYFS EGGQTKLDLA NYYLSVGPGI VNALRDRPCM 70 80 90 100 110 120 LHRFPKGVEG PKVHQKRLPA GAPPWVETVR LHFPRFGLHA DELCVQRLAD VIWAVQMSTV 130 140 150 160 170 180 EFHPWNSRRA DTEKPDEWRI DLDPMPRCGY DTVRRAAHVS REILGELGAV GWPKTSGGRG 190 200 210 220 230 240 LHIYVRIAPV HGFQDVRRAA LAFAREVERR LPDDVTTAWW RRDRAPDDLF VDYNQNARDH 250 260 270 280 290 300 TIAAAYSVRG NSRGTVSAPV TWDEIDDAVP DDFTIATMPD RFARLGDLHA GIDDAVFDLA 310 320 PLLEWAERDE RAGQDTPPEP EE

References

[1]

"Complete genome sequence of Intrasporangium calvum type strain (7 KIP)." Del Rio T.G., Chertkov O., Yasawong M., Lucas S., Deshpande S., Cheng J.F., Detter C., Tapia R., Han C., Goodwin L., Pitluck S., Liolios K., Ivanova N., Mavromatis K., Pati A., Chen A., Palaniappan K., Land M. , Hauser L., Chang Y.J., Jeffries C.D., Rohde M., Pukall R., Sikorski J., Goker M., Woyke T., Bristow J., Eisen J.A., Markowitz V., Hugenholtz P., Kyrpides N.C., Klenk H.P., Lapidus A. Stand. Genomic Sci. 3:294-303(2010) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 23552 / DSM 43043 / JCM 3097 / NBRC 12989 / 7 KIP.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002343 Genomic DNA. Translation: ADU48409.1.
RefSeq	YP_004099136.1. NC_014830.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ADU48409; ADU48409; Intca_1898.
GeneID	10084714.
KEGG	ica:Intca_1898.
PATRIC	45245338. VBIIntCal153415_1937.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000244654.
KO	K01971.
Enzyme and pathway databases
BioCyc	ICAL710696:GH9U-1931-MONOMER.
Family and domain databases
InterPro	IPR002755. DNA_primase_S. IPR014145. LigD_pol. [Graphical view]
Pfam	PF01896. DNA_primase_S. 1 hit. [Graphical view]
TIGRFAMs	TIGR02778. ligD_pol. 1 hit.
ProtoNet	Search...

Entry information

Entry name

E6SBC1_INTC7

Accession

Primary (citable) accession number: E6SBC1

Entry history

Integrated into UniProtKB/TrEMBL:	March 8, 2011
Last sequence update:	March 8, 2011
Last modified:	May 1, 2013
This is version 13 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)