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Protein
Submitted name:

Alpha amylase catalytic region

Gene

Intca_0450

Organism
Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 / NBRC 12989 / 7 KIP)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. catalytic activity Source: InterPro
  2. cation binding Source: InterPro

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciICAL710696:GH9U-462-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Alpha amylase catalytic regionImported
Gene namesi
Ordered Locus Names:Intca_0450Imported
OrganismiIntrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 / NBRC 12989 / 7 KIP)Imported
Taxonomic identifieri710696 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesMicrococcineaeIntrasporangiaceaeIntrasporangium
ProteomesiUP000008914: Chromosome

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000220639.
KOiK05343.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 3 hits.
InterProiIPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 2 hits.

Sequencei

Sequence statusi: Complete.

E6S8M9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTARWYRSGV IYSLDVRLFQ DSNGDGIGDL AGLTSRLDHL SRLGVSILWL
60 70 80 90 100
NPIHPTPFKD GGYDVADYYD VDPALGNLGD FAEFMAECDE RGIRVMLDLV
110 120 130 140 150
LNHTSDEHPW FQAARSDPDS PYRDWYVWSE EEPPDRDQGM VFPGVQESTW
160 170 180 190 200
SYDETAGAWY HHRFYAFQPD LNVLNPQVRS EMKKIVTFWE RLGVSGFRLD
210 220 230 240 250
GAPFLIEKTT AEGGAGRDHG FLVELRDRLS WLRGDAVFLA EAHVPNDQLL
260 270 280 290 300
EFFGDADGAA SRVQMLFAFR LNEALMLSLA RQAAGAIEDA LTGLPPLPRN
310 320 330 340 350
AAWATFLRNH DEVDLSQLTG EERADVFAAF GPEPDHQLYE RGIRRRLAPM
360 370 380 390 400
LGGDEARLRL AYSLQFTMPG TPVLRYGDEI GMGENLDLPE RDAIRTPMQW
410 420 430 440 450
SGTENGGFST ARQDRLIRPV VDLPPFGFKE VNVTDQRLEP NSLLTWFERM
460 470 480 490 500
LHTLRECEEI GAGTHRIIGG PPPAVLVHVA EGPTGVVMFV HNLGDTPQHL
510 520 530 540 550
ELDDVPLGEQ PPVEVFSDHP YEGELDPTRL DVAPYGFRWL RLRRSHGPAP

G
Length:551
Mass (Da):61,915
Last modified:March 8, 2011 - v1
Checksum:i2CA72F72E5453F7B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002343 Genomic DNA. Translation: ADU46998.1.
RefSeqiWP_013491319.1. NC_014830.1.
YP_004097725.1. NC_014830.1.

Genome annotation databases

EnsemblBacteriaiADU46998; ADU46998; Intca_0450.
GeneIDi10083243.
KEGGiica:Intca_0450.
PATRICi45242299. VBIIntCal153415_0454.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002343 Genomic DNA. Translation: ADU46998.1.
RefSeqiWP_013491319.1. NC_014830.1.
YP_004097725.1. NC_014830.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADU46998; ADU46998; Intca_0450.
GeneIDi10083243.
KEGGiica:Intca_0450.
PATRICi45242299. VBIIntCal153415_0454.

Phylogenomic databases

HOGENOMiHOG000220639.
KOiK05343.

Enzyme and pathway databases

BioCyciICAL710696:GH9U-462-MONOMER.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 3 hits.
InterProiIPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 2 hits.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 23552 / DSM 43043 / JCM 3097 / NBRC 12989 / 7 KIPImported.

Entry informationi

Entry nameiE6S8M9_INTC7
AccessioniPrimary (citable) accession number: E6S8M9
Entry historyi
Integrated into UniProtKB/TrEMBL: March 8, 2011
Last sequence update: March 8, 2011
Last modified: March 4, 2015
This is version 19 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.