E6S811 (E6S811_INTC7) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Succinyldiaminopimelate desuccinylase EMBL ADU49107.1
EC=3.5.1.18 EMBL ADU49107.1

Gene names

Ordered Locus Names:

Intca_2602

Organism

Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 / NBRC 12989 / 7 KIP) [Complete proteome] [HAMAP] EMBL ADU49107.1

Taxonomic identifier

710696 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Actinobacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Micrococcineae › Intrasporangiaceae › Intrasporangium › Intrasporangium calvum

Protein attributes

Sequence length	363 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Predicted

Ontologies

Keywords
Domain	Signal EMBL ADU49107.1
Molecular function	Hydrolase EMBL ADU49107.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	lysine biosynthetic process via diaminopimelate Inferred from electronic annotation. Source: InterPro
Molecular_function	succinyl-diaminopimelate desuccinylase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 24	24	Potential EMBL ADU49107.1
	Chain	25 – 363	339	Potential EMBL ADU49107.1		PRO_5000668342

Sequences

	Sequence		Length	Mass (Da)
	E6S811 [UniParc]. Last modified March 8, 2011. Version 1. Checksum: 6AE5A43B72CB6316	FASTA	363	38,377
	10 20 30 40 50 60 MPPSSVPGTS LLLDVSSDVT TLTAAVCDIQ SVSWEEAPLA DAVEAALRAL GHLEVIRDGN 70 80 90 100 110 120 SVIARTDLGR AERVVLAGHL DTVPLAAEPN LPTRREAGVL WGRGTVDMKG GVAVMLKIAA 130 140 150 160 170 180 GVPEPSRDLT FVFYDCEEIE GKFNGLGRVA ANRPDLLAAD FAVLLEPTDG AIEGGCKGTL 190 200 210 220 230 240 RVDVTTKGVA AHSARPWKGH NAIHDAAQVL GRLGAYEAER IEVDGLLFNE ALQAVGISGG 250 260 270 280 290 300 IAGNVIPDRC TVTVNYRFAP DKGVAAAYAH VQQVFEGFEC ELGDAVDGAR PGLHLPAARD 310 320 330 340 350 360 FVEALGLPVN PKEGWTDVAR FSALGIPAVN FGPGDPNLAH MDDERCPVEQ YEEAERALLR WLA

References

[1]

"Complete genome sequence of Intrasporangium calvum type strain (7 KIP)." Del Rio T.G., Chertkov O., Yasawong M., Lucas S., Deshpande S., Cheng J.F., Detter C., Tapia R., Han C., Goodwin L., Pitluck S., Liolios K., Ivanova N., Mavromatis K., Pati A., Chen A., Palaniappan K., Land M. , Hauser L., Chang Y.J., Jeffries C.D., Rohde M., Pukall R., Sikorski J., Goker M., Woyke T., Bristow J., Eisen J.A., Markowitz V., Hugenholtz P., Kyrpides N.C., Klenk H.P., Lapidus A. Stand. Genomic Sci. 3:294-303(2010) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 23552 / DSM 43043 / JCM 3097 / NBRC 12989 / 7 KIP.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002343 Genomic DNA. Translation: ADU49107.1.
RefSeq	YP_004099834.1. NC_014830.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ADU49107; ADU49107; Intca_2602.
GeneID	10085430.
KEGG	ica:Intca_2602.
PATRIC	45246816. VBIIntCal153415_2660.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000243771.
KO	K01439.
Enzyme and pathway databases
BioCyc	ICAL710696:GH9U-2647-MONOMER.
Family and domain databases
InterPro	IPR002933. Peptidase_M20. IPR011650. Peptidase_M20_dimer. IPR010174. Succinyl-DAP_deSuclase_DapE. [Graphical view]
Pfam	PF07687. M20_dimer. 1 hit. PF01546. Peptidase_M20. 1 hit. [Graphical view]
SUPFAM	SSF55031. Peptidase_M20_dimer. 1 hit.
TIGRFAMs	TIGR01900. dapE-gram_pos. 1 hit.
ProtoNet	Search...

Entry information

Entry name

E6S811_INTC7

Accession

Primary (citable) accession number: E6S811

Entry history

Integrated into UniProtKB/TrEMBL:	March 8, 2011
Last sequence update:	March 8, 2011
Last modified:	May 1, 2013
This is version 14 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)