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E6S6I4

- E6S6I4_INTC7

UniProt

E6S6I4 - E6S6I4_INTC7

Protein
Submitted name:

ATP dependent DNA ligase

Gene

Intca_3527

Organism
Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 / NBRC 12989 / 7 KIP)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 18 (01 Oct 2014)
      Sequence version 1 (08 Mar 2011)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA recombination Source: InterPro
    2. DNA repair Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciICAL710696:GH9U-3581-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    ATP dependent DNA ligaseImported
    Gene namesi
    Ordered Locus Names:Intca_3527Imported
    OrganismiIntrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 / NBRC 12989 / 7 KIP)Imported
    Taxonomic identifieri710696 [NCBI]
    Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesMicrococcineaeIntrasporangiaceaeIntrasporangium
    ProteomesiUP000008914: Chromosome

    Structurei

    3D structure databases

    ProteinModelPortaliE6S6I4.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    HOGENOMiHOG000222508.
    KOiK01971.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    E6S6I4-1 [UniParc]FASTAAdd to Basket

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    MSTPVTWEEL PDTDPRALTV RTVPALIDAR GDAWAGIDEA VGDVARAIAL    50
    WDRDVERGLG ELNFPPDYPK MPGEPPRVQP SKRRQDKADA EYMAPKAERD 100
    ADLRALWGPV PPPVAPMLAK AVKDFGAVKG TVVYEPKWDG FRSIIFRSGD 150
    EVEIGSRNEK PMTRYFPEIV EAVKASFPER AVIDGEIILI DPTEGNRLDF 200
    ELLQQRIHPA ASRVRKLAAE TPASFVAFDL LALGDEDYRG RPFSERRAAL 250
    EGALAGAEAP VHLTAMTADQ SVARDWFDQF EGAGLDGVIA KPVDVRYEPE 300
    KRLMFKVKHE RTADCVVAGY RTHKTDPTAI GSLLLGLYDG EGNLASVGVI 350
    GALPMARRRE LYEELQPLVA EWDEHPWNWA KPEEGVRTPR SSEYSRWNNQ 400
    KDLSFTPLRP ERVVEVRYDH MEGTRFRHTA QFVRWRPDRT PESCTFAQLE 450
    EPVGYDLADV LSAGRD 466
    Length:466
    Mass (Da):52,253
    Last modified:March 8, 2011 - v1
    Checksum:i0DE01F7C436140A4
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002343 Genomic DNA. Translation: ADU50001.1.
    RefSeqiYP_004100728.1. NC_014830.1.

    Genome annotation databases

    EnsemblBacteriaiADU50001; ADU50001; Intca_3527.
    GeneIDi10086366.
    KEGGiica:Intca_3527.
    PATRICi45248707. VBIIntCal153415_3590.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002343 Genomic DNA. Translation: ADU50001.1 .
    RefSeqi YP_004100728.1. NC_014830.1.

    3D structure databases

    ProteinModelPortali E6S6I4.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ADU50001 ; ADU50001 ; Intca_3527 .
    GeneIDi 10086366.
    KEGGi ica:Intca_3527.
    PATRICi 45248707. VBIIntCal153415_3590.

    Phylogenomic databases

    HOGENOMi HOG000222508.
    KOi K01971.

    Enzyme and pathway databases

    BioCyci ICAL710696:GH9U-3581-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 23552 / DSM 43043 / JCM 3097 / NBRC 12989 / 7 KIPImported.

    Entry informationi

    Entry nameiE6S6I4_INTC7
    AccessioniPrimary (citable) accession number: E6S6I4
    Entry historyi
    Integrated into UniProtKB/TrEMBL: March 8, 2011
    Last sequence update: March 8, 2011
    Last modified: October 1, 2014
    This is version 18 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3