E6S6I4 (E6S6I4_INTC7) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
ATP dependent DNA ligase EMBL ADU50001.1

Gene names

Ordered Locus Names:

Intca_3527

Organism

Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 / NBRC 12989 / 7 KIP) [Complete proteome] [HAMAP] EMBL ADU50001.1

Taxonomic identifier

710696 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Actinobacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Micrococcineae › Intrasporangiaceae › Intrasporangium › Intrasporangium calvum

Protein attributes

Sequence length	466 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Ligase EMBL ADU50001.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	DNA recombination Inferred from electronic annotation. Source: InterPro DNA repair Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: InterPro DNA ligase (ATP) activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	E6S6I4 [UniParc]. Last modified March 8, 2011. Version 1. Checksum: 0DE01F7C436140A4	FASTA	466	52,253
	10 20 30 40 50 60 MSTPVTWEEL PDTDPRALTV RTVPALIDAR GDAWAGIDEA VGDVARAIAL WDRDVERGLG 70 80 90 100 110 120 ELNFPPDYPK MPGEPPRVQP SKRRQDKADA EYMAPKAERD ADLRALWGPV PPPVAPMLAK 130 140 150 160 170 180 AVKDFGAVKG TVVYEPKWDG FRSIIFRSGD EVEIGSRNEK PMTRYFPEIV EAVKASFPER 190 200 210 220 230 240 AVIDGEIILI DPTEGNRLDF ELLQQRIHPA ASRVRKLAAE TPASFVAFDL LALGDEDYRG 250 260 270 280 290 300 RPFSERRAAL EGALAGAEAP VHLTAMTADQ SVARDWFDQF EGAGLDGVIA KPVDVRYEPE 310 320 330 340 350 360 KRLMFKVKHE RTADCVVAGY RTHKTDPTAI GSLLLGLYDG EGNLASVGVI GALPMARRRE 370 380 390 400 410 420 LYEELQPLVA EWDEHPWNWA KPEEGVRTPR SSEYSRWNNQ KDLSFTPLRP ERVVEVRYDH 430 440 450 460 MEGTRFRHTA QFVRWRPDRT PESCTFAQLE EPVGYDLADV LSAGRD

References

[1]

"Complete genome sequence of Intrasporangium calvum type strain (7 KIP)." Del Rio T.G., Chertkov O., Yasawong M., Lucas S., Deshpande S., Cheng J.F., Detter C., Tapia R., Han C., Goodwin L., Pitluck S., Liolios K., Ivanova N., Mavromatis K., Pati A., Chen A., Palaniappan K., Land M. , Hauser L., Chang Y.J., Jeffries C.D., Rohde M., Pukall R., Sikorski J., Goker M., Woyke T., Bristow J., Eisen J.A., Markowitz V., Hugenholtz P., Kyrpides N.C., Klenk H.P., Lapidus A. Stand. Genomic Sci. 3:294-303(2010) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 23552 / DSM 43043 / JCM 3097 / NBRC 12989 / 7 KIP.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002343 Genomic DNA. Translation: ADU50001.1.
RefSeq	YP_004100728.1. NC_014830.1.
3D structure databases
ProteinModelPortal	E6S6I4.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ADU50001; ADU50001; Intca_3527.
GeneID	10086366.
KEGG	ica:Intca_3527.
PATRIC	45248707. VBIIntCal153415_3590.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000222508.
KO	K01971.
Enzyme and pathway databases
BioCyc	ICAL710696:GH9U-3581-MONOMER.
Family and domain databases
Gene3D	2.40.50.140. 1 hit.
InterPro	IPR012309. DNA_ligase_ATP-dep_C. IPR012310. DNA_ligase_ATP-dep_cent. IPR012340. NA-bd_OB-fold. [Graphical view]
Pfam	PF04679. DNA_ligase_A_C. 1 hit. PF01068. DNA_ligase_A_M. 1 hit. [Graphical view]
SUPFAM	SSF50249. Nucleic_acid_OB. 1 hit.
PROSITE	PS50160. DNA_LIGASE_A3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

E6S6I4_INTC7

Accession

Primary (citable) accession number: E6S6I4

Entry history

Integrated into UniProtKB/TrEMBL:	March 8, 2011
Last sequence update:	March 8, 2011
Last modified:	May 1, 2013
This is version 14 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)