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E6S6I4

- E6S6I4_INTC7

UniProt

E6S6I4 - E6S6I4_INTC7

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Protein
Submitted name:

ATP dependent DNA ligase

Gene
Intca_3527
Organism
Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 / NBRC 12989 / 7 KIP)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciICAL710696:GH9U-3581-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:Intca_3527Imported
OrganismiIntrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 / NBRC 12989 / 7 KIP)Imported
Taxonomic identifieri710696 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesMicrococcineaeIntrasporangiaceaeIntrasporangium
ProteomesiUP000008914: Chromosome

Structurei

3D structure databases

ProteinModelPortaliE6S6I4.

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000222508.
KOiK01971.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

E6S6I4-1 [UniParc]FASTAAdd to Basket

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MSTPVTWEEL PDTDPRALTV RTVPALIDAR GDAWAGIDEA VGDVARAIAL    50
WDRDVERGLG ELNFPPDYPK MPGEPPRVQP SKRRQDKADA EYMAPKAERD 100
ADLRALWGPV PPPVAPMLAK AVKDFGAVKG TVVYEPKWDG FRSIIFRSGD 150
EVEIGSRNEK PMTRYFPEIV EAVKASFPER AVIDGEIILI DPTEGNRLDF 200
ELLQQRIHPA ASRVRKLAAE TPASFVAFDL LALGDEDYRG RPFSERRAAL 250
EGALAGAEAP VHLTAMTADQ SVARDWFDQF EGAGLDGVIA KPVDVRYEPE 300
KRLMFKVKHE RTADCVVAGY RTHKTDPTAI GSLLLGLYDG EGNLASVGVI 350
GALPMARRRE LYEELQPLVA EWDEHPWNWA KPEEGVRTPR SSEYSRWNNQ 400
KDLSFTPLRP ERVVEVRYDH MEGTRFRHTA QFVRWRPDRT PESCTFAQLE 450
EPVGYDLADV LSAGRD 466
Length:466
Mass (Da):52,253
Last modified:March 8, 2011 - v1
Checksum:i0DE01F7C436140A4
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002343 Genomic DNA. Translation: ADU50001.1.
RefSeqiYP_004100728.1. NC_014830.1.

Genome annotation databases

EnsemblBacteriaiADU50001; ADU50001; Intca_3527.
GeneIDi10086366.
KEGGiica:Intca_3527.
PATRICi45248707. VBIIntCal153415_3590.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002343 Genomic DNA. Translation: ADU50001.1 .
RefSeqi YP_004100728.1. NC_014830.1.

3D structure databases

ProteinModelPortali E6S6I4.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ADU50001 ; ADU50001 ; Intca_3527 .
GeneIDi 10086366.
KEGGi ica:Intca_3527.
PATRICi 45248707. VBIIntCal153415_3590.

Phylogenomic databases

HOGENOMi HOG000222508.
KOi K01971.

Enzyme and pathway databases

BioCyci ICAL710696:GH9U-3581-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 23552 / DSM 43043 / JCM 3097 / NBRC 12989 / 7 KIP.

Entry informationi

Entry nameiE6S6I4_INTC7
AccessioniPrimary (citable) accession number: E6S6I4
Entry historyi
Integrated into UniProtKB/TrEMBL: March 8, 2011
Last sequence update: March 8, 2011
Last modified: April 16, 2014
This is version 17 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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