Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Basket 0
(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

E6RP84

- E6RP84_PSEU9

UniProt

E6RP84 - E6RP84_PSEU9

Protein
Submitted name:

DNA ligase

Gene

PSM_A0958

Organism
Pseudoalteromonas sp. (strain SM9913)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
    • BLAST
    • Align
    • Format
    • Add to basket
    • History
      Entry version 24 (01 Oct 2014)
      Sequence version 1 (08 Mar 2011)
      Previous versions | rss
    • Help video
    • Feedback
    • Comment

    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: UniProtKB-EC

    GO - Biological processi

    1. DNA recombination Source: InterPro
    2. DNA repair Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciPSP234831:GH93-975-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    DNA ligaseImported (EC:6.5.1.1Imported)
    Gene namesi
    Ordered Locus Names:PSM_A0958Imported
    OrganismiPseudoalteromonas sp. (strain SM9913)Imported
    Taxonomic identifieri234831 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesPseudoalteromonadaceaePseudoalteromonas
    ProteomesiUP000007933: Chromosome I

    Family & Domainsi

    Phylogenomic databases

    HOGENOMiHOG000293070.
    KOiK01971.
    OMAiGKGQFEN.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012310. DNA_ligase_ATP-dep_cent.
    IPR029319. DNA_ligase_OB.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF01068. DNA_ligase_A_M. 1 hit.
    PF14743. DNA_ligase_OB_2. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    E6RP84-1 [UniParc]FASTAAdd to Basket

    « Hide

    MVTIQRYLFI FLTLFSASLL AQLPQVQLAD VYDETKHNDI RQYLVSEKFD    50
    GVRAIWTGKQ FVTRQGNPIN PPKWFTAPLP DVWLDGELWT KRGQFSVLSG 100
    IVRTKIPDDL LWQTVTYQVF DMPDTNTPFH RRYQNYLSLI TQLNSPHIKA 150
    VKQYQFSDNQ QLSDYFNKVT KQGGEGVMLH LAEAKHTSGR SSALLKLKPY 200
    LDAEALVIEY LPGKGKYTGM LGALRVQTKQ GVTFSIGTGF SDEERKRPPA 250
    IGSTITYRYH GYTKNGLPRF ASFLRERPEK 280
    Length:280
    Mass (Da):32,075
    Last modified:March 8, 2011 - v1
    Checksum:i4C2D68261CDB0BC3
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001796 Genomic DNA. Translation: ADT67906.1.
    RefSeqiWP_013464443.1. NC_014803.1.
    YP_004068057.1. NC_014803.1.

    Genome annotation databases

    EnsemblBacteriaiADT67906; ADT67906; PSM_A0958.
    GeneIDi10037848.
    KEGGipsm:PSM_A0958.
    PATRICi45329325. VBIPseSp136886_1572.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001796 Genomic DNA. Translation: ADT67906.1 .
    RefSeqi WP_013464443.1. NC_014803.1.
    YP_004068057.1. NC_014803.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ADT67906 ; ADT67906 ; PSM_A0958 .
    GeneIDi 10037848.
    KEGGi psm:PSM_A0958.
    PATRICi 45329325. VBIPseSp136886_1572.

    Phylogenomic databases

    HOGENOMi HOG000293070.
    KOi K01971.
    OMAi GKGQFEN.

    Enzyme and pathway databases

    BioCyci PSP234831:GH93-975-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012310. DNA_ligase_ATP-dep_cent.
    IPR029319. DNA_ligase_OB.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF01068. DNA_ligase_A_M. 1 hit.
    PF14743. DNA_ligase_OB_2. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Comparative genomics reveals a deep-sea sediment-adapted life style of Pseudoalteromonas sp. SM9913."
      Qin Q.L., Li Y., Zhang Y.J., Zhou Z.M., Zhang W.X., Chen X.L., Zhang X.Y., Zhou B.C., Wang L., Zhang Y.Z.
      ISME J. 5:274-284(2011) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: SM9913Imported.

    Entry informationi

    Entry nameiE6RP84_PSEU9
    AccessioniPrimary (citable) accession number: E6RP84
    Entry historyi
    Integrated into UniProtKB/TrEMBL: March 8, 2011
    Last sequence update: March 8, 2011
    Last modified: October 1, 2014
    This is version 24 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3