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Protein
Submitted name:

Cysteine sulfinic acid decarboxylase

Gene

PSM_A0793

Organism
Pseudoalteromonas sp. (strain SM9913)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

Cofactori

pyridoxal 5'-phosphateUniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

LyaseUniRule annotationImported

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Enzyme and pathway databases

BioCyciPSP234831:GH93-810-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Cysteine sulfinic acid decarboxylaseImported (EC:4.1.1.15Imported)
Gene namesi
Ordered Locus Names:PSM_A0793Imported
OrganismiPseudoalteromonas sp. (strain SM9913)Imported
Taxonomic identifieri234831 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesPseudoalteromonadaceaePseudoalteromonas
ProteomesiUP000007933 Componenti: Chromosome I

Interactioni

Protein-protein interaction databases

STRINGi234831.PSM_A0793.

Family & Domainsi

Sequence similaritiesi

Belongs to the group II decarboxylase family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000282553.
KOiK01580.
OMAiEGTAMIS.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR022517. Asp_decarboxylase_pyridox.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR03799. NOD_PanD_pyr. 1 hit.

Sequencei

Sequence statusi: Complete.

E6RNB4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDQKRCAVAS KESLKRIFTV PEAPDSTLSK IELEISSNLA GFLNENIAAI
60 70 80 90 100
EKPLHEIEKD FQSAAIPEEP TFVSCYAQDI MEQLVAHSVH TAAPSFIGHM
110 120 130 140 150
TSALPHFLLP LSKLMVGLNQ NLVKIETSKA FTPLERQVLG MMHHLAYSQS
160 170 180 190 200
DGFYSKWMHS AKTSLGAFCS GGTVANITAL WIARNRLLKA DGNFKGIAAQ
210 220 230 240 250
GLVAGMLHYG HKGLAVLISE RGHYSLGKSV DLLGIGRENL IGIKTSADNK
260 270 280 290 300
VDVSAMREKA LELEAQGIKV MAIVGVAGTT ETGNIDPLED MANLAQEINC
310 320 330 340 350
HFHVDAAWGG ATLLSNTHRH LLKGIEHADS ITIDAHKQMY VPMGAGLVLF
360 370 380 390 400
KDPAATDAIE HHAEYILRKG SKDLGSHTLE GSRPGMAMLV HACLRVIGRK
410 420 430 440 450
GYEMLIDRSI KKARYFADLI KADEDFELIS EPELCLLTYR YVPKQIKHAI
460 470 480 490 500
AQADAQTRLD IFAALNRFTA SMQKRQRESG RSFVSRTRLT PVQYDNQPTV
510 520 530 540
VFRVVLANPL TSGAILKEIL EEQKELAQTD PVFKKYLRKY M
Length:541
Mass (Da):59,683
Last modified:March 8, 2011 - v1
Checksum:iC90053B0A95EBE15
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001796 Genomic DNA. Translation: ADT67741.1.
RefSeqiWP_013464300.1. NC_014803.1.

Genome annotation databases

EnsemblBacteriaiADT67741; ADT67741; PSM_A0793.
KEGGipsm:PSM_A0793.
PATRICi45328990. VBIPseSp136886_1406.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001796 Genomic DNA. Translation: ADT67741.1.
RefSeqiWP_013464300.1. NC_014803.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi234831.PSM_A0793.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADT67741; ADT67741; PSM_A0793.
KEGGipsm:PSM_A0793.
PATRICi45328990. VBIPseSp136886_1406.

Phylogenomic databases

HOGENOMiHOG000282553.
KOiK01580.
OMAiEGTAMIS.

Enzyme and pathway databases

BioCyciPSP234831:GH93-810-MONOMER.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR022517. Asp_decarboxylase_pyridox.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR03799. NOD_PanD_pyr. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Comparative genomics reveals a deep-sea sediment-adapted life style of Pseudoalteromonas sp. SM9913."
    Qin Q.L., Li Y., Zhang Y.J., Zhou Z.M., Zhang W.X., Chen X.L., Zhang X.Y., Zhou B.C., Wang L., Zhang Y.Z.
    ISME J. 5:274-284(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: SM9913Imported.

Entry informationi

Entry nameiE6RNB4_PSEU9
AccessioniPrimary (citable) accession number: E6RNB4
Entry historyi
Integrated into UniProtKB/TrEMBL: March 8, 2011
Last sequence update: March 8, 2011
Last modified: July 22, 2015
This is version 28 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.