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E6RLY8 (E6RLY8_PSEU9) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 25. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length359 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids By similarity. HAMAP-Rule MF_01201

Catalytic activity

L-alanine = D-alanine. HAMAP-Rule MF_01201 SAAS SAAS009006

Cofactor

Pyridoxal phosphate By similarity. HAMAP-Rule MF_01201 SAAS SAAS009006

Pathway

Amino-acid biosynthesis; D-alanine biosynthesis; D-alanine from L-alanine: step 1/1. HAMAP-Rule MF_01201

Sequence similarities

Belongs to the alanine racemase family. HAMAP-Rule MF_01201 RuleBase RU004188

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site341Proton acceptor; specific for D-alanine By similarity HAMAP-Rule MF_01201
Active site2541Proton acceptor; specific for L-alanine By similarity HAMAP-Rule MF_01201
Binding site1291Substrate By similarity HAMAP-Rule MF_01201
Binding site3021Substrate; via amide nitrogen By similarity HAMAP-Rule MF_01201

Amino acid modifications

Modified residue341N6-(pyridoxal phosphate)lysine By similarity HAMAP-Rule MF_01201

Sequences

Sequence LengthMass (Da)Tools
E6RLY8 [UniParc].

Last modified March 8, 2011. Version 1.
Checksum: 871BC322A7044FCA

FASTA35939,040
        10         20         30         40         50         60 
MRLAIAEINL QALAHNLAQV RQFAPNSKVM AVLKANAYGH GLVKIAQHLN DADAFAVARI 

        70         80         90        100        110        120 
DEALALRAGG LTKPIVLLEG FFHQDDLPIL LANNFQTIIH DENQLRALEN AKLDAPISCW 

       130        140        150        160        170        180 
LKINTGMHRL GVAPTQLNDF YQRLQATDNA KDTINLMTHF SSADDVNDPK TAEQIALFDS 

       190        200        210        220        230        240 
LVQGKQQAHC LANSAGIIAW PAGHGEWVRP GLMMYGVSPM LNTSGKDHQL KPVMRLTTKV 

       250        260        270        280        290        300 
IAIRDVDAAQ GVGYGGSWQS AQPTKLAVVA MGYGDGYPRH AKHGTPVVIA GKRYGIAGNI 

       310        320        330        340        350 
SMDMISVDIG ENADGIKVGD EVVMWGPELP VEEIAQCADT ISYELLCNIT PRVSYEYQR 

« Hide

References

[1]"Comparative genomics reveals a deep-sea sediment-adapted life style of Pseudoalteromonas sp. SM9913."
Qin Q.L., Li Y., Zhang Y.J., Zhou Z.M., Zhang W.X., Chen X.L., Zhang X.Y., Zhou B.C., Wang L., Zhang Y.Z.
ISME J. 5:274-284(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: SM9913.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001796 Genomic DNA. Translation: ADT67572.1.
RefSeqYP_004067723.1. NC_014803.1.

3D structure databases

ProteinModelPortalE6RLY8.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADT67572; ADT67572; PSM_A0622.
GeneID10037514.
KEGGpsm:PSM_A0622.
PATRIC45328638. VBIPseSp136886_1239.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000031446.
KOK01775.
OMAINNQLAP.

Enzyme and pathway databases

BioCycPSP234831:GH93-632-MONOMER.
UniPathwayUPA00042; UER00497.

Family and domain databases

Gene3D2.40.37.10. 1 hit.
HAMAPMF_01201. Ala_racemase.
InterProIPR000821. Ala_racemase.
IPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR001608. Ala_racemase_N.
IPR020622. Ala_racemase_pyridoxalP-BS.
[Graphical view]
PfamPF00842. Ala_racemase_C. 1 hit.
PF01168. Ala_racemase_N. 1 hit.
[Graphical view]
PRINTSPR00992. ALARACEMASE.
SMARTSM01005. Ala_racemase_C. 1 hit.
[Graphical view]
SUPFAMSSF50621. SSF50621. 1 hit.
TIGRFAMsTIGR00492. alr. 1 hit.
PROSITEPS00395. ALANINE_RACEMASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameE6RLY8_PSEU9
AccessionPrimary (citable) accession number: E6RLY8
Entry history
Integrated into UniProtKB/TrEMBL: March 8, 2011
Last sequence update: March 8, 2011
Last modified: February 19, 2014
This is version 25 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)