E6RLY8 (E6RLY8_PSEU9) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Alanine racemase RuleBase RU000608
EC=5.1.1.1 RuleBase RU000608

Gene names

Ordered Locus Names:

PSM_A0622

Organism

Pseudoalteromonas sp. (strain SM9913) [Complete proteome] [HAMAP] EMBL ADT67572.1

Taxonomic identifier

234831 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Alteromonadales › Pseudoalteromonadaceae › Pseudoalteromonas

Protein attributes

Sequence length	359 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	L-alanine = D-alanine. RuleBase RU000608 SAAS SAAS020622
Cofactor	Pyridoxal phosphate By similarity. RuleBase RU000608 SAAS SAAS020622
Pathway	Amino-acid biosynthesis; D-alanine biosynthesis; D-alanine from L-alanine: step 1/1. SAAS SAAS020622
Sequence similarities	Belongs to the alanine racemase family. RuleBase RU004188

Ontologies

Keywords
Ligand	Pyridoxal phosphate RuleBase RU000608 SAAS SAAS020622
Molecular function	Isomerase RuleBase RU000608 SAAS SAAS020622 EMBL ADT67572.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	D-alanine biosynthetic process Inferred from electronic annotation. Source: UniProtKB-UniPathway
Molecular_function	alanine racemase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	E6RLY8 [UniParc]. Last modified March 8, 2011. Version 1. Checksum: 871BC322A7044FCA	FASTA	359	39,040
	10 20 30 40 50 60 MRLAIAEINL QALAHNLAQV RQFAPNSKVM AVLKANAYGH GLVKIAQHLN DADAFAVARI 70 80 90 100 110 120 DEALALRAGG LTKPIVLLEG FFHQDDLPIL LANNFQTIIH DENQLRALEN AKLDAPISCW 130 140 150 160 170 180 LKINTGMHRL GVAPTQLNDF YQRLQATDNA KDTINLMTHF SSADDVNDPK TAEQIALFDS 190 200 210 220 230 240 LVQGKQQAHC LANSAGIIAW PAGHGEWVRP GLMMYGVSPM LNTSGKDHQL KPVMRLTTKV 250 260 270 280 290 300 IAIRDVDAAQ GVGYGGSWQS AQPTKLAVVA MGYGDGYPRH AKHGTPVVIA GKRYGIAGNI 310 320 330 340 350 SMDMISVDIG ENADGIKVGD EVVMWGPELP VEEIAQCADT ISYELLCNIT PRVSYEYQR

References

[1]

"Comparative genomics reveals a deep-sea sediment-adapted life style of Pseudoalteromonas sp. SM9913." Qin Q.L., Li Y., Zhang Y.J., Zhou Z.M., Zhang W.X., Chen X.L., Zhang X.Y., Zhou B.C., Wang L., Zhang Y.Z. ISME J. 5:274-284(2011) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: SM9913.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001796 Genomic DNA. Translation: ADT67572.1.
RefSeq	YP_004067723.1. NC_014803.1.
3D structure databases
ProteinModelPortal	E6RLY8.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ADT67572; ADT67572; PSM_A0622.
GeneID	10037514.
KEGG	psm:PSM_A0622.
PATRIC	45328638. VBIPseSp136886_1239.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000031446.
KO	K01775.
OMA	HQLETAV.
Enzyme and pathway databases
BioCyc	PSP234831:GH93-614-MONOMER.
UniPathway	UPA00042; UER00497.
Family and domain databases
Gene3D	2.40.37.10. 1 hit.
HAMAP	MF_01201. Ala_racemase.
InterPro	IPR000821. Ala_racemase. IPR009006. Ala_racemase/Decarboxylase_C. IPR011079. Ala_racemase_C. IPR001608. Ala_racemase_N. IPR020622. Ala_racemase_pyridoxalP-BS. [Graphical view]
Pfam	PF00842. Ala_racemase_C. 1 hit. PF01168. Ala_racemase_N. 1 hit. [Graphical view]
PRINTS	PR00992. ALARACEMASE.
SMART	SM01005. Ala_racemase_C. 1 hit. [Graphical view]
SUPFAM	SSF50621. Racem_decarbox_C. 1 hit.
TIGRFAMs	TIGR00492. alr. 1 hit.
PROSITE	PS00395. ALANINE_RACEMASE. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

E6RLY8_PSEU9

Accession

Primary (citable) accession number: E6RLY8

Entry history

Integrated into UniProtKB/TrEMBL:	March 8, 2011
Last sequence update:	March 8, 2011
Last modified:	May 1, 2013
This is version 21 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)