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E6RKM8 (E6RKM8_PSEU9) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 20. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:yfbQ EMBL ADT68594.1
Ordered Locus Names:PSM_A1667 EMBL ADT68594.1
OrganismPseudoalteromonas sp. (strain SM9913) [Complete proteome] [HAMAP] EMBL ADT68594.1
Taxonomic identifier234831 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesPseudoalteromonadaceaePseudoalteromonas

Protein attributes

Sequence length383 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionAminotransferase EMBL ADT68594.1
Transferase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processbiosynthetic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functionpyridoxal phosphate binding

Inferred from electronic annotation. Source: InterPro

transaminase activity

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
E6RKM8 [UniParc].

Last modified March 8, 2011. Version 1.
Checksum: 95F17430667B7DE2

FASTA38343,083
        10         20         30         40         50         60 
MQAKKMEDEG QKVLKLNIGN PAAFGFDMPE DMHRDIIRNL YSAQGYCDSK GLYSARVAIY 

        70         80         90        100        110        120 
QHYQQRGLHN LDVDNIYIGN GVSELIQMVT QALLNNDDEV LIPAPDYPLW TASVKLAGGN 

       130        140        150        160        170        180 
PVHYLCDEEQ DWFPDIDDIK SKITSKTKAL VLINPNNPTG AVYSDALLEE LINIAREHKL 

       190        200        210        220        230        240 
LLLSDEIYEK ILYDGVTHTS IGSLCDDLPI ITFNGLAKTY RAAGLRMGWM VLSGRTALMT 

       250        260        270        280        290        300 
DLIKGLDILA SMRLCANVPA QYAIQQALGG VQSIDSLIDP GGRLYVQRDI AWRGLNAIDG 

       310        320        330        340        350        360 
ISCKKPKGAL YAFPKVDTAK FNIKSDEQMM FDLLKTEKIL LVHGRAFNWP EPDHFRLVFL 

       370        380 
PNKDDLSSAM MKMQRFFKDY RQE 

« Hide

References

[1]"Comparative genomics reveals a deep-sea sediment-adapted life style of Pseudoalteromonas sp. SM9913."
Qin Q.L., Li Y., Zhang Y.J., Zhou Z.M., Zhang W.X., Chen X.L., Zhang X.Y., Zhou B.C., Wang L., Zhang Y.Z.
ISME J. 5:274-284(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: SM9913.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001796 Genomic DNA. Translation: ADT68594.1.
RefSeqYP_004068745.1. NC_014803.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADT68594; ADT68594; PSM_A1667.
GeneID10038542.
KEGGpsm:PSM_A1667.
PATRIC45330759. VBIPseSp136886_2264.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000223042.
KOK14260.
OMAYQARDMR.

Enzyme and pathway databases

BioCycPSP234831:GH93-1687-MONOMER.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProIPR004839. Aminotransferase_I/II.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamPF00155. Aminotran_1_2. 1 hit.
[Graphical view]
SUPFAMSSF53383. SSF53383. 1 hit.
ProtoNetSearch...

Entry information

Entry nameE6RKM8_PSEU9
AccessionPrimary (citable) accession number: E6RKM8
Entry history
Integrated into UniProtKB/TrEMBL: March 8, 2011
Last sequence update: March 8, 2011
Last modified: July 9, 2014
This is version 20 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)