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E6RDT0 (E6RDT0_CRYGW) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 19. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length1073 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + (deoxyribonucleotide)(n) + (deoxyribonucleotide)(m) = AMP + diphosphate + (deoxyribonucleotide)(n+m).

Sequence similarities

Belongs to the ATP-dependent DNA ligase family. RuleBase RU004196

Sequences

Sequence LengthMass (Da)Tools
E6RDT0 [UniParc].

Last modified March 8, 2011. Version 1.
Checksum: C24415B1B5D3DCDD

FASTA1,073123,876
        10         20         30         40         50         60 
MAVHAPYYHA PPPTQEINGE KPTLTAATTL ERPADCINRG QYPAFYIICG YLNRLRADAP 

        70         80         90        100        110        120 
HKKYELLMRI FGNWREKVGP DLYPLIRLLL PDKDRERPVY NLKESMLARC YIDILSLEKH 

       130        140        150        160        170        180 
SEAAQRLIKW KQPAEGSSNP TGDFAKVCYN EIKARSTVEE GQLSVEAVNM LLDKLAVGKM 

       190        200        210        220        230        240 
KQAEYVPILK AINMQCTAEE QEWIIRIILK DLHISIRERG VLSAFHPDAI DLYNICSDLK 

       250        260        270        280        290        300 
RVCWTLYDPG FRLNKNETHL ELFHSFVPQL CGRMNDTSLE NIAKAIGAPK EFIMEEKLDG 

       310        320        330        340        350        360 
ERIQLHMRGN GAQWFYCSRK AKDYTYLYGA HPGEGSLTRY IANAFQDNVR NIILDGEMMV 

       370        380        390        400        410        420 
WDPVVERYLA FGTLKSAALD HFNDETAPRP CFKVFDILFL NDHCLSRKRL SERKRLLRSG 

       430        440        450        460        470        480 
KIFKNIEDYK GRLEFVDEKR GKSAKDIREY LERVVETKGE GLVVKKTDVI YQTNSRGYDW 

       490        500        510        520        530        540 
IKVKPEYSDQ MGENLEVLVL GGWWGKGGRS GKISRLLCGL REQAFDDGTL QDFLFNRFWN 

       550        560        570        580        590        600 
ELFRLRVDFH KKHWKPFDRS NPPAFMKLGP VGLDDKPDVY IEPENSFVIE VKASEIVPAG 

       610        620        630        640        650        660 
GGYGIGFTLR FPRCKYIYYD RNSRDYELDD DWDFCGTRKL TEWADFMDLF SRPKRSYDDS 

       670        680        690        700        710        720 
QGPGKKKKRK VVRSKKNHIT TNFRGQKLSN IDVETSIFSD MTFYIAKGTS EYPKADLEAL 

       730        740        750        760        770        780 
VHKHGADFTQ AQLSDLSAIV ISPDQKSPLV RAQIRHGVNV IKPEWIFESI ARRKALPLLK 

       790        800        810        820        830        840 
EFLVYASEEA QEGRYYNKTL EQYDKISFVR DRTGETLFEE DGDADVEEEA MDDEDKDEID 

       850        860        870        880        890        900 
MEEAREAKDR RMAREDLKER ESNRSLEQKK LQEAWGLRSR ASTGGSDSEA EEIKSLKEES 

       910        920        930        940        950        960 
DTDSERIRRL RAIYQDEEDE ENDSHESDVG VDGDGYRLVP LNELNDKEEG FMGESPEAMH 

       970        980        990       1000       1010       1020 
YDEDRIFYHL AFYIDTPENA AVNGLESSSP SLNAQERLAK IEKLLVEKGG RAVKSISDPK 

      1030       1040       1050       1060       1070 
LTHIIMDDED SGRYVELTRK TALPKRKHIV TPKWVEDCVD EETLLDEDLY KPR 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000296 Genomic DNA. Translation: ADV24969.1.
RefSeqXP_003196756.1. XM_003196708.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID10185288.
KEGGcgi:CGB_K3320W.

Phylogenomic databases

KOK10777.
OrthoDBEOG7QC84G.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
3.40.50.10190. 2 hits.
InterProIPR001357. BRCT_dom.
IPR000977. DNA_ligase_ATP-dep.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF00533. BRCT. 2 hits.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SMARTSM00292. BRCT. 2 hits.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
SSF52113. SSF52113. 2 hits.
TIGRFAMsTIGR00574. dnl1. 1 hit.
PROSITEPS50172. BRCT. 2 hits.
PS00697. DNA_LIGASE_A1. 1 hit.
PS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameE6RDT0_CRYGW
AccessionPrimary (citable) accession number: E6RDT0
Entry history
Integrated into UniProtKB/TrEMBL: March 8, 2011
Last sequence update: March 8, 2011
Last modified: November 13, 2013
This is version 19 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)