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E6RB09

- E6RB09_CRYGW

UniProt

E6RB09 - E6RB09_CRYGW

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Protein
DNA ligase
Gene
CGB_H3700W
Organism
Cryptococcus gattii serotype B (strain WM276 / ATCC MYA-4071) (Filobasidiella gattii) (Cryptococcus bacillisporus)
Status
Unreviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Catalytic activityi

ATP + (deoxyribonucleotide)(n) + (deoxyribonucleotide)(m) = AMP + diphosphate + (deoxyribonucleotide)(n+m).UniRule annotation

GO - Molecular functioni

  1. ATP binding Source: UniProtKB-KW
  2. DNA binding Source: InterPro
  3. DNA ligase (ATP) activity Source: UniProtKB-EC

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: UniProtKB-KW
  3. DNA replication Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

LigaseUniRule annotationImported

Keywords - Biological processi

DNA damage, DNA recombinationUniRule annotation, DNA repairUniRule annotation, DNA replicationUniRule annotation

Keywords - Ligandi

ATP-bindingUniRule annotation, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Recommended name:
DNA ligaseUniRule annotation (EC:6.5.1.1UniRule annotation)
Gene namesi
Ordered Locus Names:CGB_H3700WImported
OrganismiCryptococcus gattii serotype B (strain WM276 / ATCC MYA-4071) (Filobasidiella gattii) (Cryptococcus bacillisporus)Imported
Taxonomic identifieri367775 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaBasidiomycotaAgaricomycotinaTremellomycetesTremellalesTremellaceaeFilobasidiellaFilobasidiella/Cryptococcus neoformans species complex
ProteomesiUP000007805: Chromosome H

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

KOiK10747.
OrthoDBiEOG7TXKRG.

Family and domain databases

Gene3Di1.10.3260.10. 1 hit.
2.40.50.140. 1 hit.
HAMAPiMF_00407. DNA_ligase.
InterProiIPR022865. DNA_ligae_ATP-dep_bac/arc.
IPR000977. DNA_ligase_ATP-dep.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMiSSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR00574. dnl1. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

E6RB09-1 [UniParc]FASTAAdd to Basket

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MSDTDSPVKA NVRKKRTVIL SDDEDEGLSP PVTKKQLSSP RHSHASDEET    50
EPPRKIAKTS SKVAPIFAPK EKREKPPSKA SSTSPKAPTK KTEVKNKDEK 100
PLASIFTKSV RKPEPKDDDE VSDEVKQKGK DEEEEDEVYD EIEDKQEGEA 150
AVKLASIFTK NQKSVPVADK GWKDGEAVPY SALVSTFEKI EATTKRLEIL 200
ELLTQFLLVV AKRDTATDTK GSMLLKVVYL CINRLCPDYM GIELGIGESL 250
LVKAIAESTG RAMPKIKEDL KKEGDLGKVA TNSRNTQSTM FKPKPLTVPY 300
VFQCLTEIAK ATGNASQAKK VGIIKKLLAA CQSTEAKFII RSLEGKLRIG 350
LADKTVVVAL AHAIVLKTIG DKKPSPEKLA IMLEQGAETV KAVYSELPSY 400
DLVIPALLQD GVEGLRKHCK LTPGVPLKPM LAKPTKAITE VLDRFEGKEF 450
TCEYKYDGER AQVHLLEDGT ISVFSRNSEN MSAKYPDLID QIPRALKPTA 500
KTFVIDAEAV AYDLETKKIL PFQDLSRRKR KDVKAEDITV RVHIFAFDLL 550
YLNGESLLAK ELKERRRLLQ EHFQPVESEF AFAKSSDGST SEEIQAFLEE 600
SVKDGCEGLM VKMLTSEAST YEPSRRSMNW LKLKKDYLSG VGDSLDLVVV 650
GAYHGKGKRT AVYGAFLLAC YDPDSEHYQT ICKIGTGFSE EILTKFYELL 700
KPLELGVVRG DIEVGGAKPD VWFEPRVVWE VLTADLSLSP VYAAAHGVID 750
SRGISLRFPR FIRIRDDKSA DEATTAEQVC EFYQRQVSAS GKKGAGPDVD 800
DFW 803
Length:803
Mass (Da):89,068
Last modified:March 8, 2011 - v1
Checksum:i9DC8B5A346FAFAAF
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000293 Genomic DNA. Translation: ADV23976.1.
RefSeqiXP_003195763.1. XM_003195715.1.

Genome annotation databases

GeneIDi10185600.
KEGGicgi:CGB_H3700W.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000293 Genomic DNA. Translation: ADV23976.1 .
RefSeqi XP_003195763.1. XM_003195715.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 10185600.
KEGGi cgi:CGB_H3700W.

Phylogenomic databases

KOi K10747.
OrthoDBi EOG7TXKRG.

Family and domain databases

Gene3Di 1.10.3260.10. 1 hit.
2.40.50.140. 1 hit.
HAMAPi MF_00407. DNA_ligase.
InterProi IPR022865. DNA_ligae_ATP-dep_bac/arc.
IPR000977. DNA_ligase_ATP-dep.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view ]
SUPFAMi SSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR00574. dnl1. 1 hit.
PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
PS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: WM276 / ATCC MYA-4071.
  2. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: WM276.

Entry informationi

Entry nameiE6RB09_CRYGW
AccessioniPrimary (citable) accession number: E6RB09
Entry historyi
Integrated into UniProtKB/TrEMBL: March 8, 2011
Last sequence update: March 8, 2011
Last modified: February 19, 2014
This is version 20 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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