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E6RB09

- E6RB09_CRYGW

UniProt

E6RB09 - E6RB09_CRYGW

Protein

DNA ligase

Gene

CGB_H3700W

Organism
Cryptococcus gattii serotype B (strain WM276 / ATCC MYA-4071) (Filobasidiella gattii) (Cryptococcus bacillisporus)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 21 (01 Oct 2014)
      Sequence version 1 (08 Mar 2011)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    ATP + (deoxyribonucleotide)(n) + (deoxyribonucleotide)(m) = AMP + diphosphate + (deoxyribonucleotide)(n+m).UniRule annotation

    GO - Molecular functioni

    1. ATP binding Source: UniProtKB-KW
    2. DNA binding Source: InterPro
    3. DNA ligase (ATP) activity Source: UniProtKB-EC

    GO - Biological processi

    1. DNA ligation involved in DNA repair Source: InterPro
    2. DNA recombination Source: UniProtKB-KW
    3. DNA replication Source: UniProtKB-KW

    Keywords - Molecular functioni

    LigaseUniRule annotationImported

    Keywords - Biological processi

    DNA damage, DNA recombinationUniRule annotation, DNA repairUniRule annotation, DNA replicationUniRule annotation

    Keywords - Ligandi

    ATP-bindingUniRule annotation, Nucleotide-binding

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    DNA ligaseUniRule annotation (EC:6.5.1.1UniRule annotation)
    Gene namesi
    Ordered Locus Names:CGB_H3700WImported
    OrganismiCryptococcus gattii serotype B (strain WM276 / ATCC MYA-4071) (Filobasidiella gattii) (Cryptococcus bacillisporus)Imported
    Taxonomic identifieri367775 [NCBI]
    Taxonomic lineageiEukaryotaFungiDikaryaBasidiomycotaAgaricomycotinaTremellomycetesTremellalesTremellaceaeFilobasidiellaFilobasidiella/Cryptococcus neoformans species complex
    ProteomesiUP000007805: Chromosome H

    Family & Domainsi

    Sequence similaritiesi

    Phylogenomic databases

    KOiK10747.
    OrthoDBiEOG7TXKRG.

    Family and domain databases

    Gene3Di1.10.3260.10. 1 hit.
    2.40.50.140. 1 hit.
    HAMAPiMF_00407. DNA_ligase.
    InterProiIPR022865. DNA_ligae_ATP-dep_bac/arc.
    IPR000977. DNA_ligase_ATP-dep.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view]
    SUPFAMiSSF117018. SSF117018. 1 hit.
    SSF50249. SSF50249. 1 hit.
    TIGRFAMsiTIGR00574. dnl1. 1 hit.
    PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
    PS00333. DNA_LIGASE_A2. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    E6RB09-1 [UniParc]FASTAAdd to Basket

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    MSDTDSPVKA NVRKKRTVIL SDDEDEGLSP PVTKKQLSSP RHSHASDEET    50
    EPPRKIAKTS SKVAPIFAPK EKREKPPSKA SSTSPKAPTK KTEVKNKDEK 100
    PLASIFTKSV RKPEPKDDDE VSDEVKQKGK DEEEEDEVYD EIEDKQEGEA 150
    AVKLASIFTK NQKSVPVADK GWKDGEAVPY SALVSTFEKI EATTKRLEIL 200
    ELLTQFLLVV AKRDTATDTK GSMLLKVVYL CINRLCPDYM GIELGIGESL 250
    LVKAIAESTG RAMPKIKEDL KKEGDLGKVA TNSRNTQSTM FKPKPLTVPY 300
    VFQCLTEIAK ATGNASQAKK VGIIKKLLAA CQSTEAKFII RSLEGKLRIG 350
    LADKTVVVAL AHAIVLKTIG DKKPSPEKLA IMLEQGAETV KAVYSELPSY 400
    DLVIPALLQD GVEGLRKHCK LTPGVPLKPM LAKPTKAITE VLDRFEGKEF 450
    TCEYKYDGER AQVHLLEDGT ISVFSRNSEN MSAKYPDLID QIPRALKPTA 500
    KTFVIDAEAV AYDLETKKIL PFQDLSRRKR KDVKAEDITV RVHIFAFDLL 550
    YLNGESLLAK ELKERRRLLQ EHFQPVESEF AFAKSSDGST SEEIQAFLEE 600
    SVKDGCEGLM VKMLTSEAST YEPSRRSMNW LKLKKDYLSG VGDSLDLVVV 650
    GAYHGKGKRT AVYGAFLLAC YDPDSEHYQT ICKIGTGFSE EILTKFYELL 700
    KPLELGVVRG DIEVGGAKPD VWFEPRVVWE VLTADLSLSP VYAAAHGVID 750
    SRGISLRFPR FIRIRDDKSA DEATTAEQVC EFYQRQVSAS GKKGAGPDVD 800
    DFW 803
    Length:803
    Mass (Da):89,068
    Last modified:March 8, 2011 - v1
    Checksum:i9DC8B5A346FAFAAF
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000293 Genomic DNA. Translation: ADV23976.1.
    RefSeqiXP_003195763.1. XM_003195715.1.

    Genome annotation databases

    GeneIDi10185600.
    KEGGicgi:CGB_H3700W.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000293 Genomic DNA. Translation: ADV23976.1 .
    RefSeqi XP_003195763.1. XM_003195715.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 10185600.
    KEGGi cgi:CGB_H3700W.

    Phylogenomic databases

    KOi K10747.
    OrthoDBi EOG7TXKRG.

    Family and domain databases

    Gene3Di 1.10.3260.10. 1 hit.
    2.40.50.140. 1 hit.
    HAMAPi MF_00407. DNA_ligase.
    InterProi IPR022865. DNA_ligae_ATP-dep_bac/arc.
    IPR000977. DNA_ligase_ATP-dep.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view ]
    SUPFAMi SSF117018. SSF117018. 1 hit.
    SSF50249. SSF50249. 1 hit.
    TIGRFAMsi TIGR00574. dnl1. 1 hit.
    PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
    PS00333. DNA_LIGASE_A2. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: WM276 / ATCC MYA-4071Imported.
    2. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: WM276.

    Entry informationi

    Entry nameiE6RB09_CRYGW
    AccessioniPrimary (citable) accession number: E6RB09
    Entry historyi
    Integrated into UniProtKB/TrEMBL: March 8, 2011
    Last sequence update: March 8, 2011
    Last modified: October 1, 2014
    This is version 21 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3