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E6PBV0 (E6PBV0_TETTH) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 18. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
OrganismTetrahymena thermophila EMBL DAA33996.1
Taxonomic identifier5911 [NCBI]
Taxonomic lineageEukaryotaAlveolataCiliophoraIntramacronucleataOligohymenophoreaHymenostomatidaTetrahymeninaTetrahymenidaeTetrahymena

Protein attributes

Sequence length343 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

Ontologies

Sequences

Sequence LengthMass (Da)Tools
E6PBV0 [UniParc].

Last modified March 8, 2011. Version 1.
Checksum: B5B375A88217BE4A

FASTA34338,478
        10         20         30         40         50         60 
MADNSSLDIQ VVKRGILEGH SDWVTSIVAG FSQKENEDSP VLISGSRDKT VMIWKLYEEE 

        70         80         90        100        110        120 
QNGYFGIPHK ALTGHNHFVS DLALSQENCF AISSSWDKTL RLWDLRTGTT YKRFVGHQSE 

       130        140        150        160        170        180 
VYSVAFSPDN RQILSAGAER EIKLWNILGE CKFSSAEKEN HSDWVSCVRY SPIMKSANKV 

       190        200        210        220        230        240 
QPFAPYFASV GWDGRLKVWN TNFQIRYTFK AHESNVNHLS ISPNGKYIAT GGKDKKLLIW 

       250        260        270        280        290        300 
DILNLTYPQR EFDAGSTINQ IAFNPKLQWV AVGTDQGVKI FNLMTQSKAP VCTIEAEPIT 

       310        320        330        340 
KAEGQKGKNP QCTSLAWNAL GKKLFAGFTD GVIRTFSFET SAN 

« Hide

References

[1]"Crystal structure of the eukaryotic 40S ribosomal subunit in complex with initiation factor 1."
Rabl J., Leibundgut M., Ataide S.F., Haag A., Ban N.
Science 331:730-736(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
[2]"The crystal structure of the eukaryotic 40S ribosomal subunit in complex with eIF1 and eIF1A."
Weisser M., Voigts-Hoffmann F., Rabl J., Leibundgut M., Ban N.
Nat. Struct. Mol. Biol. 20:1015-1017(2013) [PubMed] [Europe PMC] [Abstract]
Cited for: X-RAY CRYSTALLOGRAPHY (3.70 ANGSTROMS).

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
BK007939 mRNA. Translation: DAA33996.1.
RefSeqXP_001025944.1. XM_001025944.1.
UniGeneTth.1935.

3D structure databases

PDBe
RCSB-PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
4BPEX-ray3.70R1-343[»]
4BPNX-ray3.70R1-343[»]
4BPOX-ray3.70R1-343[»]
4BPPX-ray3.70R1-343[»]
ProteinModelPortalE6PBV0.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID7827776.
KEGGtet:TTHERM_01113100.

Phylogenomic databases

KOK14753.

Family and domain databases

Gene3D2.130.10.10. 2 hits.
InterProIPR020472. G-protein_beta_WD-40_rep.
IPR015943. WD40/YVTN_repeat-like_dom.
IPR001680. WD40_repeat.
IPR019775. WD40_repeat_CS.
IPR017986. WD40_repeat_dom.
[Graphical view]
PfamPF00400. WD40. 5 hits.
[Graphical view]
PRINTSPR00320. GPROTEINBRPT.
SMARTSM00320. WD40. 7 hits.
[Graphical view]
SUPFAMSSF50978. SSF50978. 1 hit.
PROSITEPS00678. WD_REPEATS_1. 2 hits.
PS50082. WD_REPEATS_2. 4 hits.
PS50294. WD_REPEATS_REGION. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameE6PBV0_TETTH
AccessionPrimary (citable) accession number: E6PBV0
Entry history
Integrated into UniProtKB/TrEMBL: March 8, 2011
Last sequence update: March 8, 2011
Last modified: July 9, 2014
This is version 18 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)