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E6PBV0

- E6PBV0_TETTH

UniProt

E6PBV0 - E6PBV0_TETTH

Protein
Submitted name:

40S ribosomal protein RACK1

Gene
N/A
Organism
Tetrahymena thermophila
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli
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    • History
      Entry version 19 (01 Oct 2014)
      Sequence version 1 (08 Mar 2011)
      Previous versions | rss
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    Functioni

    Keywords - Molecular functioni

    Ribonucleoprotein, Ribosomal proteinImported

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    40S ribosomal protein RACK1Imported
    OrganismiTetrahymena thermophilaImported
    Taxonomic identifieri5911 [NCBI]
    Taxonomic lineageiEukaryotaAlveolataCiliophoraIntramacronucleataOligohymenophoreaHymenostomatidaTetrahymeninaTetrahymenidaeTetrahymena

    Subcellular locationi

    GO - Cellular componenti

    1. ribosome Source: UniProtKB-KW

    Structurei

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    4BPEX-ray3.70R1-343[»]
    4BPNX-ray3.70R1-343[»]
    4BPOX-ray3.70R1-343[»]
    4BPPX-ray3.70R1-343[»]
    ProteinModelPortaliE6PBV0.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Keywords - Domaini

    RepeatUniRule annotation, WD repeatUniRule annotation

    Phylogenomic databases

    KOiK14753.

    Family and domain databases

    Gene3Di2.130.10.10. 2 hits.
    InterProiIPR020472. G-protein_beta_WD-40_rep.
    IPR015943. WD40/YVTN_repeat-like_dom.
    IPR001680. WD40_repeat.
    IPR019775. WD40_repeat_CS.
    IPR017986. WD40_repeat_dom.
    [Graphical view]
    PfamiPF00400. WD40. 5 hits.
    [Graphical view]
    PRINTSiPR00320. GPROTEINBRPT.
    SMARTiSM00320. WD40. 7 hits.
    [Graphical view]
    SUPFAMiSSF50978. SSF50978. 1 hit.
    PROSITEiPS00678. WD_REPEATS_1. 2 hits.
    PS50082. WD_REPEATS_2. 4 hits.
    PS50294. WD_REPEATS_REGION. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    E6PBV0-1 [UniParc]FASTAAdd to Basket

    « Hide

    MADNSSLDIQ VVKRGILEGH SDWVTSIVAG FSQKENEDSP VLISGSRDKT    50
    VMIWKLYEEE QNGYFGIPHK ALTGHNHFVS DLALSQENCF AISSSWDKTL 100
    RLWDLRTGTT YKRFVGHQSE VYSVAFSPDN RQILSAGAER EIKLWNILGE 150
    CKFSSAEKEN HSDWVSCVRY SPIMKSANKV QPFAPYFASV GWDGRLKVWN 200
    TNFQIRYTFK AHESNVNHLS ISPNGKYIAT GGKDKKLLIW DILNLTYPQR 250
    EFDAGSTINQ IAFNPKLQWV AVGTDQGVKI FNLMTQSKAP VCTIEAEPIT 300
    KAEGQKGKNP QCTSLAWNAL GKKLFAGFTD GVIRTFSFET SAN 343
    Length:343
    Mass (Da):38,478
    Last modified:March 8, 2011 - v1
    Checksum:iB5B375A88217BE4A
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BK007939 mRNA. Translation: DAA33996.1.
    RefSeqiXP_001025944.1. XM_001025944.1.
    UniGeneiTth.1935.

    Genome annotation databases

    GeneIDi7827776.
    KEGGitet:TTHERM_01113100.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BK007939 mRNA. Translation: DAA33996.1 .
    RefSeqi XP_001025944.1. XM_001025944.1.
    UniGenei Tth.1935.

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    4BPE X-ray 3.70 R 1-343 [» ]
    4BPN X-ray 3.70 R 1-343 [» ]
    4BPO X-ray 3.70 R 1-343 [» ]
    4BPP X-ray 3.70 R 1-343 [» ]
    ProteinModelPortali E6PBV0.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 7827776.
    KEGGi tet:TTHERM_01113100.

    Phylogenomic databases

    KOi K14753.

    Family and domain databases

    Gene3Di 2.130.10.10. 2 hits.
    InterProi IPR020472. G-protein_beta_WD-40_rep.
    IPR015943. WD40/YVTN_repeat-like_dom.
    IPR001680. WD40_repeat.
    IPR019775. WD40_repeat_CS.
    IPR017986. WD40_repeat_dom.
    [Graphical view ]
    Pfami PF00400. WD40. 5 hits.
    [Graphical view ]
    PRINTSi PR00320. GPROTEINBRPT.
    SMARTi SM00320. WD40. 7 hits.
    [Graphical view ]
    SUPFAMi SSF50978. SSF50978. 1 hit.
    PROSITEi PS00678. WD_REPEATS_1. 2 hits.
    PS50082. WD_REPEATS_2. 4 hits.
    PS50294. WD_REPEATS_REGION. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Crystal structure of the eukaryotic 40S ribosomal subunit in complex with initiation factor 1."
      Rabl J., Leibundgut M., Ataide S.F., Haag A., Ban N.
      Science 331:730-736(2011) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
    2. "The crystal structure of the eukaryotic 40S ribosomal subunit in complex with eIF1 and eIF1A."
      Weisser M., Voigts-Hoffmann F., Rabl J., Leibundgut M., Ban N.
      Nat. Struct. Mol. Biol. 20:1015-1017(2013) [PubMed] [Europe PMC] [Abstract]
      Cited for: X-RAY CRYSTALLOGRAPHY (3.70 ANGSTROMS).

    Entry informationi

    Entry nameiE6PBV0_TETTH
    AccessioniPrimary (citable) accession number: E6PBV0
    Entry historyi
    Integrated into UniProtKB/TrEMBL: March 8, 2011
    Last sequence update: March 8, 2011
    Last modified: October 1, 2014
    This is version 19 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    3D-structureImported

    External Data

    Dasty 3