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E6PBU5 (E6PBU5_TETTH) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 16. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesRecommended name:
40S ribosomal protein S27 RuleBase RU000671
OrganismTetrahymena thermophila EMBL DAA33991.1
Taxonomic identifier5911 [NCBI]
Taxonomic lineageEukaryotaAlveolataCiliophoraIntramacronucleataOligohymenophoreaHymenostomatidaTetrahymeninaTetrahymenidaeTetrahymena

Protein attributes

Sequence length81 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

General annotation (Comments)

Cofactor

Binds 1 zinc ion per subunit By similarity. RuleBase RU000671

Miscellaneous

The sequence shown here is derived from an EMBL/GenBank/DDBJ third party annotation (TPA) entry. EMBL DAA33991.1

Sequence similarities

Belongs to the ribosomal protein S27e family. RuleBase RU000671

Ontologies

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Metal binding351Zinc PDB 4BPE PDB 4BPN PDB 4BPO
Metal binding381Zinc PDB 4BPE PDB 4BPN PDB 4BPO
Metal binding541Zinc PDB 4BPE PDB 4BPN PDB 4BPO
Metal binding571Zinc PDB 4BPE PDB 4BPN PDB 4BPO

Sequences

Sequence LengthMass (Da)Tools
E6PBU5 [UniParc].

Last modified March 8, 2011. Version 1.
Checksum: E6E5A18E12D307C3

FASTA819,234
        10         20         30         40         50         60 
MERDLLNPIY EEEKQKNKFK RLIQAPNSYF MDVKCAQCQN IQMIFSNAQS TIICEKCSAI 

        70         80 
LCKPTGGKVQ IQAGCAFKIK N 

« Hide

References

[1]"Crystal structure of the eukaryotic 40S ribosomal subunit in complex with initiation factor 1."
Rabl J., Leibundgut M., Ataide S.F., Haag A., Ban N.
Science 0:0-0(2011)
Cited for: NUCLEOTIDE SEQUENCE.
[2]"The crystal structure of the eukaryotic 40S ribosomal subunit in complex with eIF1 and eIF1A."
Weisser M., Voigts-Hoffmann F., Rabl J., Leibundgut M., Ban N.
Nat. Struct. Mol. Biol. 20:1015-1017(2013) [PubMed] [Europe PMC] [Abstract]
Cited for: X-RAY CRYSTALLOGRAPHY (3.70 ANGSTROMS) IN COMPLEX WITH ZINC.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
BK007934 mRNA. Translation: DAA33991.1.

3D structure databases

PDBe
RCSB PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
4BPEX-ray3.7061-81[»]
4BPNX-ray3.7061-81[»]
4BPOX-ray3.7061-81[»]
4BPPX-ray3.7061-81[»]
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Family and domain databases

Gene3D2.20.25.100. 1 hit.
HAMAPMF_00371. Ribosomal_S27e.
InterProIPR000592. Ribosomal_S27e.
IPR023407. Ribosomal_S27e_Zn-bd_dom.
IPR011332. Ribosomal_zn-bd.
[Graphical view]
PANTHERPTHR11594. PTHR11594. 1 hit.
PfamPF01667. Ribosomal_S27e. 1 hit.
[Graphical view]
SUPFAMSSF57829. SSF57829. 1 hit.
PROSITEPS01168. RIBOSOMAL_S27E. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameE6PBU5_TETTH
AccessionPrimary (citable) accession number: E6PBU5
Entry history
Integrated into UniProtKB/TrEMBL: March 8, 2011
Last sequence update: March 8, 2011
Last modified: February 19, 2014
This is version 16 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)