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Protein
Submitted name:

40S ribosomal protein rpS25e

Gene
N/A
Organism
Tetrahymena thermophila
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal proteinImported

Names & Taxonomyi

Protein namesi
Submitted name:
40S ribosomal protein rpS25eImported
Submitted name:
Rps25eImported
OrganismiTetrahymena thermophilaImported
Taxonomic identifieri5911 [NCBI]
Taxonomic lineageiEukaryotaAlveolataCiliophoraIntramacronucleataOligohymenophoreaHymenostomatidaTetrahymeninaTetrahymenidaeTetrahymena

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi5911.EAS04979.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2XZMX-ray3.9381-143[»]
2XZNX-ray3.9381-143[»]
4BTSX-ray3.70A8/B8/C8/D81-143[»]
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

KOiK02975.

Family and domain databases

InterProiIPR004977. Ribosomal_S25.
[Graphical view]
PANTHERiPTHR12850. PTHR12850. 1 hit.
PfamiPF03297. Ribosomal_S25. 1 hit.
[Graphical view]
ProDomiPD012268. Ribosomal_S25. 1 hit.
[Graphical view] [Entries sharing at least one domain]

Sequencei

Sequence statusi: Complete.

E6PBU3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGKQPAAGQK KTKEAIAKAA QAKKGGKKKW TKGKAKDKVN HAVFIEKKNV
60 70 80 90 100
ESIINNPSKV GKVLTVSTVV EKLKVNGSLA RQLMRTMADR KLVEKVAKNG
110 120 130 140
NQWVYSVIGG VKEDKTAAPA AAGGKKQQQS KKGAAADKEE VQA
Length:143
Mass (Da):15,264
Last modified:March 8, 2011 - v1
Checksum:iD26D05C1BBEE4989
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BK007932 mRNA. Translation: DAA33989.1.
RefSeqiXP_001025224.2. XM_001025224.2.
UniGeneiTth.3226.

Genome annotation databases

GeneIDi7826344.
KEGGitet:TTHERM_00686220.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BK007932 mRNA. Translation: DAA33989.1.
RefSeqiXP_001025224.2. XM_001025224.2.
UniGeneiTth.3226.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2XZMX-ray3.9381-143[»]
2XZNX-ray3.9381-143[»]
4BTSX-ray3.70A8/B8/C8/D81-143[»]
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi5911.EAS04979.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi7826344.
KEGGitet:TTHERM_00686220.

Phylogenomic databases

KOiK02975.

Family and domain databases

InterProiIPR004977. Ribosomal_S25.
[Graphical view]
PANTHERiPTHR12850. PTHR12850. 1 hit.
PfamiPF03297. Ribosomal_S25. 1 hit.
[Graphical view]
ProDomiPD012268. Ribosomal_S25. 1 hit.
[Graphical view] [Entries sharing at least one domain]
ProtoNetiSearch...

Publicationsi

  1. "Crystal structure of the eukaryotic 40S ribosomal subunit in complex with initiation factor 1."
    Rabl J., Leibundgut M., Ataide S.F., Haag A., Ban N.
    Science 331:730-736(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (3.93 ANGSTROMS).
  2. "The crystal structure of the eukaryotic 40S ribosomal subunit in complex with eIF1 and eIF1A."
    Weisser M., Voigts-Hoffmann F., Rabl J., Leibundgut M., Ban N.
    Nat. Struct. Mol. Biol. 20:1015-1017(2013) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (3.70 ANGSTROMS).

Entry informationi

Entry nameiE6PBU3_TETTH
AccessioniPrimary (citable) accession number: E6PBU3
Entry historyi
Integrated into UniProtKB/TrEMBL: March 8, 2011
Last sequence update: March 8, 2011
Last modified: June 24, 2015
This is version 17 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sourcesImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.