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E6PBT6

- E6PBT6_TETTH

UniProt

E6PBT6 - E6PBT6_TETTH

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Protein
Submitted name:

40S ribosomal protein rpS18e

Gene
N/A
Organism
Tetrahymena thermophila
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  1. RNA binding Source: InterPro
  2. structural constituent of ribosome Source: InterPro

GO - Biological processi

  1. translation Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal proteinUniRule annotationImported

Names & Taxonomyi

Protein namesi
Submitted name:
40S ribosomal protein rpS18eImported
Submitted name:
Rps18eImported
OrganismiTetrahymena thermophilaImported
Taxonomic identifieri5911 [NCBI]
Taxonomic lineageiEukaryotaAlveolataCiliophoraIntramacronucleataOligohymenophoreaHymenostomatidaTetrahymeninaTetrahymenidaeTetrahymena

Subcellular locationi

GO - Cellular componenti

  1. ribosome Source: UniProtKB-KW
Complete GO annotation...

Structurei

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2XZMX-ray3.93M1-155[»]
2XZNX-ray3.93M1-155[»]
4BPEX-ray3.70M1-155[»]
4BPNX-ray3.70M1-155[»]
4BPOX-ray3.70M1-155[»]
4BPPX-ray3.70M1-155[»]
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein S13P family.UniRule annotation

Phylogenomic databases

KOiK02964.

Family and domain databases

Gene3Di4.10.910.10. 1 hit.
HAMAPiMF_01315. Ribosomal_S13_S18.
InterProiIPR027437. 30s_Rbsml_prot_S13_C.
IPR001892. Ribosomal_S13.
IPR010979. Ribosomal_S13-like_H2TH.
IPR018269. Ribosomal_S13_CS.
[Graphical view]
PfamiPF00416. Ribosomal_S13. 1 hit.
[Graphical view]
PIRSFiPIRSF002134. Ribosomal_S13. 1 hit.
SUPFAMiSSF46946. SSF46946. 1 hit.
PROSITEiPS00646. RIBOSOMAL_S13_1. 1 hit.
PS50159. RIBOSOMAL_S13_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

E6PBT6-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MSFVIEKESD FKYIHRILNT NIDGKRITPI ALTGIRGIGR RFAYIICKVL
60 70 80 90 100
KIDPNARAGL LTEDQCNKIT DLIADPEAHG IPTWLLNRIN DFKDGKNYQM
110 120 130 140 150
ASNTLDTKMR EDLERLKKIK SHRGLRHFWG LKVRGQHTKT SGRHGVVCGV

VRKNK
Length:155
Mass (Da):17,766
Last modified:March 8, 2011 - v1
Checksum:iCA1A3065CAB20F79
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BK007925 mRNA. Translation: DAA33982.1.
RefSeqiXP_001019588.1. XM_001019588.2.
UniGeneiTth.498.

Genome annotation databases

GeneIDi7835779.
KEGGitet:TTHERM_00131110.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BK007925 mRNA. Translation: DAA33982.1 .
RefSeqi XP_001019588.1. XM_001019588.2.
UniGenei Tth.498.

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
2XZM X-ray 3.93 M 1-155 [» ]
2XZN X-ray 3.93 M 1-155 [» ]
4BPE X-ray 3.70 M 1-155 [» ]
4BPN X-ray 3.70 M 1-155 [» ]
4BPO X-ray 3.70 M 1-155 [» ]
4BPP X-ray 3.70 M 1-155 [» ]
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 7835779.
KEGGi tet:TTHERM_00131110.

Phylogenomic databases

KOi K02964.

Family and domain databases

Gene3Di 4.10.910.10. 1 hit.
HAMAPi MF_01315. Ribosomal_S13_S18.
InterProi IPR027437. 30s_Rbsml_prot_S13_C.
IPR001892. Ribosomal_S13.
IPR010979. Ribosomal_S13-like_H2TH.
IPR018269. Ribosomal_S13_CS.
[Graphical view ]
Pfami PF00416. Ribosomal_S13. 1 hit.
[Graphical view ]
PIRSFi PIRSF002134. Ribosomal_S13. 1 hit.
SUPFAMi SSF46946. SSF46946. 1 hit.
PROSITEi PS00646. RIBOSOMAL_S13_1. 1 hit.
PS50159. RIBOSOMAL_S13_2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Crystal structure of the eukaryotic 40S ribosomal subunit in complex with initiation factor 1."
    Rabl J., Leibundgut M., Ataide S.F., Haag A., Ban N.
    Science 331:730-736(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (3.93 ANGSTROMS).
  2. "The crystal structure of the eukaryotic 40S ribosomal subunit in complex with eIF1 and eIF1A."
    Weisser M., Voigts-Hoffmann F., Rabl J., Leibundgut M., Ban N.
    Nat. Struct. Mol. Biol. 20:1015-1017(2013) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (3.70 ANGSTROMS).

Entry informationi

Entry nameiE6PBT6_TETTH
AccessioniPrimary (citable) accession number: E6PBT6
Entry historyi
Integrated into UniProtKB/TrEMBL: March 8, 2011
Last sequence update: March 8, 2011
Last modified: October 29, 2014
This is version 21 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureImported

External Data

Dasty 3