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E6PBT6

- E6PBT6_TETTH

UniProt

E6PBT6 - E6PBT6_TETTH

Protein
Submitted name:

40S ribosomal protein rpS18e

Gene
N/A
Organism
Tetrahymena thermophila
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli
  1. Functioni

    GO - Molecular functioni

    1. RNA binding Source: InterPro
    2. structural constituent of ribosome Source: InterPro

    GO - Biological processi

    1. translation Source: InterPro

    Keywords - Molecular functioni

    Ribonucleoprotein, Ribosomal proteinUniRule annotationImported

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    40S ribosomal protein rpS18eImported
    Submitted name:
    Rps18eImported
    OrganismiTetrahymena thermophilaImported
    Taxonomic identifieri5911 [NCBI]
    Taxonomic lineageiEukaryotaAlveolataCiliophoraIntramacronucleataOligohymenophoreaHymenostomatidaTetrahymeninaTetrahymenidaeTetrahymena

    Subcellular locationi

    GO - Cellular componenti

    1. ribosome Source: UniProtKB-KW

    Structurei

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    2XZMX-ray3.93M1-155[»]
    2XZNX-ray3.93M1-155[»]
    4BPEX-ray3.70M1-155[»]
    4BPNX-ray3.70M1-155[»]
    4BPOX-ray3.70M1-155[»]
    4BPPX-ray3.70M1-155[»]
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ribosomal protein S13P family.UniRule annotation

    Phylogenomic databases

    KOiK02964.

    Family and domain databases

    Gene3Di4.10.910.10. 1 hit.
    HAMAPiMF_01315. Ribosomal_S13_S18.
    InterProiIPR027437. 30s_Rbsml_prot_S13_C.
    IPR001892. Ribosomal_S13.
    IPR010979. Ribosomal_S13-like_H2TH.
    IPR018269. Ribosomal_S13_CS.
    [Graphical view]
    PfamiPF00416. Ribosomal_S13. 1 hit.
    [Graphical view]
    PIRSFiPIRSF002134. Ribosomal_S13. 1 hit.
    SUPFAMiSSF46946. SSF46946. 1 hit.
    PROSITEiPS00646. RIBOSOMAL_S13_1. 1 hit.
    PS50159. RIBOSOMAL_S13_2. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    E6PBT6-1 [UniParc]FASTAAdd to Basket

    « Hide

    MSFVIEKESD FKYIHRILNT NIDGKRITPI ALTGIRGIGR RFAYIICKVL    50
    KIDPNARAGL LTEDQCNKIT DLIADPEAHG IPTWLLNRIN DFKDGKNYQM 100
    ASNTLDTKMR EDLERLKKIK SHRGLRHFWG LKVRGQHTKT SGRHGVVCGV 150
    VRKNK 155
    Length:155
    Mass (Da):17,766
    Last modified:March 8, 2011 - v1
    Checksum:iCA1A3065CAB20F79
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BK007925 mRNA. Translation: DAA33982.1.
    RefSeqiXP_001019588.1. XM_001019588.2.
    UniGeneiTth.498.

    Genome annotation databases

    GeneIDi7835779.
    KEGGitet:TTHERM_00131110.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BK007925 mRNA. Translation: DAA33982.1 .
    RefSeqi XP_001019588.1. XM_001019588.2.
    UniGenei Tth.498.

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    2XZM X-ray 3.93 M 1-155 [» ]
    2XZN X-ray 3.93 M 1-155 [» ]
    4BPE X-ray 3.70 M 1-155 [» ]
    4BPN X-ray 3.70 M 1-155 [» ]
    4BPO X-ray 3.70 M 1-155 [» ]
    4BPP X-ray 3.70 M 1-155 [» ]
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 7835779.
    KEGGi tet:TTHERM_00131110.

    Phylogenomic databases

    KOi K02964.

    Family and domain databases

    Gene3Di 4.10.910.10. 1 hit.
    HAMAPi MF_01315. Ribosomal_S13_S18.
    InterProi IPR027437. 30s_Rbsml_prot_S13_C.
    IPR001892. Ribosomal_S13.
    IPR010979. Ribosomal_S13-like_H2TH.
    IPR018269. Ribosomal_S13_CS.
    [Graphical view ]
    Pfami PF00416. Ribosomal_S13. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF002134. Ribosomal_S13. 1 hit.
    SUPFAMi SSF46946. SSF46946. 1 hit.
    PROSITEi PS00646. RIBOSOMAL_S13_1. 1 hit.
    PS50159. RIBOSOMAL_S13_2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Crystal structure of the eukaryotic 40S ribosomal subunit in complex with initiation factor 1."
      Rabl J., Leibundgut M., Ataide S.F., Haag A., Ban N.
      Science 331:730-736(2011) [PubMed] [Europe PMC] [Abstract]
      Cited for: X-RAY CRYSTALLOGRAPHY (3.93 ANGSTROMS).
    2. "The crystal structure of the eukaryotic 40S ribosomal subunit in complex with eIF1 and eIF1A."
      Weisser M., Voigts-Hoffmann F., Rabl J., Leibundgut M., Ban N.
      Nat. Struct. Mol. Biol. 20:1015-1017(2013) [PubMed] [Europe PMC] [Abstract]
      Cited for: X-RAY CRYSTALLOGRAPHY (3.70 ANGSTROMS).

    Entry informationi

    Entry nameiE6PBT6_TETTH
    AccessioniPrimary (citable) accession number: E6PBT6
    Entry historyi
    Integrated into UniProtKB/TrEMBL: March 8, 2011
    Last sequence update: March 8, 2011
    Last modified: October 1, 2014
    This is version 20 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    3D-structureImported

    External Data

    Dasty 3