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E6PBS7

- E6PBS7_TETTH

UniProt

E6PBS7 - E6PBS7_TETTH

Protein
Submitted name:

40S ribosomal protein rpS9e

Gene
N/A
Organism
Tetrahymena thermophila
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli
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    • History
      Entry version 19 (01 Oct 2014)
      Sequence version 1 (08 Mar 2011)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. rRNA binding Source: InterPro
    2. structural constituent of ribosome Source: InterPro

    GO - Biological processi

    1. translation Source: InterPro

    Keywords - Molecular functioni

    Ribonucleoprotein, Ribosomal proteinUniRule annotationImported

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    40S ribosomal protein rpS9eImported
    OrganismiTetrahymena thermophilaImported
    Taxonomic identifieri5911 [NCBI]
    Taxonomic lineageiEukaryotaAlveolataCiliophoraIntramacronucleataOligohymenophoreaHymenostomatidaTetrahymeninaTetrahymenidaeTetrahymena

    Subcellular locationi

    GO - Cellular componenti

    1. small ribosomal subunit Source: InterPro

    Structurei

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    4BPEX-ray3.70D1-181[»]
    4BPNX-ray3.70D1-181[»]
    4BPOX-ray3.70D1-181[»]
    4BPPX-ray3.70D1-181[»]
    ProteinModelPortaliE6PBS7.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ribosomal protein S4P family.UniRule annotation
    Contains 1 S4 RNA-binding domain.UniRule annotation

    Phylogenomic databases

    KOiK02997.

    Family and domain databases

    Gene3Di3.10.290.10. 1 hit.
    InterProiIPR022801. Ribosomal_S4/S9.
    IPR005710. Ribosomal_S4/S9_euk/arc.
    IPR001912. Ribosomal_S4/S9_N.
    IPR018079. Ribosomal_S4_CS.
    IPR002942. S4_RNA-bd.
    [Graphical view]
    PANTHERiPTHR11831. PTHR11831. 1 hit.
    PfamiPF00163. Ribosomal_S4. 1 hit.
    PF01479. S4. 1 hit.
    [Graphical view]
    SMARTiSM00363. S4. 1 hit.
    [Graphical view]
    TIGRFAMsiTIGR01018. rpsD_arch. 1 hit.
    PROSITEiPS00632. RIBOSOMAL_S4. 1 hit.
    PS50889. S4. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    E6PBS7-1 [UniParc]FASTAAdd to Basket

    « Hide

    MGKTYINTSK TYSTPRRPYE KERLDNEMKL IGTFGLKNKR EVWRVQMILA    50
    KFRKAARELL TLDPKDPRRL FEGSALLRRM FKYGLLSEQE RKLDYVLGLT 100
    IHKLMERRLQ TRVFKLNLAN SIHHSRVLIR QRHIKVGKNL VNVPSFMVRT 150
    DSEKSIDFAS TSPLGGGREG RTKRKNAKKS A 181
    Length:181
    Mass (Da):21,145
    Last modified:March 8, 2011 - v1
    Checksum:i80418D3C0B6A4F37
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BK007916 mRNA. Translation: DAA33973.1.
    RefSeqiXP_001011432.2. XM_001011432.2.
    UniGeneiTth.3206.

    Genome annotation databases

    GeneIDi7843595.
    KEGGitet:TTHERM_00434070.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BK007916 mRNA. Translation: DAA33973.1 .
    RefSeqi XP_001011432.2. XM_001011432.2.
    UniGenei Tth.3206.

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    4BPE X-ray 3.70 D 1-181 [» ]
    4BPN X-ray 3.70 D 1-181 [» ]
    4BPO X-ray 3.70 D 1-181 [» ]
    4BPP X-ray 3.70 D 1-181 [» ]
    ProteinModelPortali E6PBS7.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 7843595.
    KEGGi tet:TTHERM_00434070.

    Phylogenomic databases

    KOi K02997.

    Family and domain databases

    Gene3Di 3.10.290.10. 1 hit.
    InterProi IPR022801. Ribosomal_S4/S9.
    IPR005710. Ribosomal_S4/S9_euk/arc.
    IPR001912. Ribosomal_S4/S9_N.
    IPR018079. Ribosomal_S4_CS.
    IPR002942. S4_RNA-bd.
    [Graphical view ]
    PANTHERi PTHR11831. PTHR11831. 1 hit.
    Pfami PF00163. Ribosomal_S4. 1 hit.
    PF01479. S4. 1 hit.
    [Graphical view ]
    SMARTi SM00363. S4. 1 hit.
    [Graphical view ]
    TIGRFAMsi TIGR01018. rpsD_arch. 1 hit.
    PROSITEi PS00632. RIBOSOMAL_S4. 1 hit.
    PS50889. S4. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Crystal structure of the eukaryotic 40S ribosomal subunit in complex with initiation factor 1."
      Rabl J., Leibundgut M., Ataide S.F., Haag A., Ban N.
      Science 331:730-736(2011) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
    2. "The crystal structure of the eukaryotic 40S ribosomal subunit in complex with eIF1 and eIF1A."
      Weisser M., Voigts-Hoffmann F., Rabl J., Leibundgut M., Ban N.
      Nat. Struct. Mol. Biol. 20:1015-1017(2013) [PubMed] [Europe PMC] [Abstract]
      Cited for: X-RAY CRYSTALLOGRAPHY (3.70 ANGSTROMS).

    Entry informationi

    Entry nameiE6PBS7_TETTH
    AccessioniPrimary (citable) accession number: E6PBS7
    Entry historyi
    Integrated into UniProtKB/TrEMBL: March 8, 2011
    Last sequence update: March 8, 2011
    Last modified: October 1, 2014
    This is version 19 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    3D-structureImported

    External Data

    Dasty 3