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Protein
Submitted name:

40S ribosomal protein rpS9e

Gene
N/A
Organism
Tetrahymena thermophila
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  1. rRNA binding Source: InterPro
  2. structural constituent of ribosome Source: InterPro

GO - Biological processi

  1. translation Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal proteinUniRule annotationImported

Names & Taxonomyi

Protein namesi
Submitted name:
40S ribosomal protein rpS9eImported
OrganismiTetrahymena thermophilaImported
Taxonomic identifieri5911 [NCBI]
Taxonomic lineageiEukaryotaAlveolataCiliophoraIntramacronucleataOligohymenophoreaHymenostomatidaTetrahymeninaTetrahymenidaeTetrahymena

Subcellular locationi

GO - Cellular componenti

  1. small ribosomal subunit Source: InterPro
Complete GO annotation...

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
4BPEX-ray3.70D1-181[»]
4BPNX-ray3.70D1-181[»]
4BPOX-ray3.70D1-181[»]
4BPPX-ray3.70D1-181[»]
ProteinModelPortaliE6PBS7.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein S4P family.UniRule annotation
Contains 1 S4 RNA-binding domain.UniRule annotation

Phylogenomic databases

KOiK02997.

Family and domain databases

Gene3Di3.10.290.10. 1 hit.
InterProiIPR022801. Ribosomal_S4/S9.
IPR005710. Ribosomal_S4/S9_euk/arc.
IPR001912. Ribosomal_S4/S9_N.
IPR018079. Ribosomal_S4_CS.
IPR002942. S4_RNA-bd.
[Graphical view]
PANTHERiPTHR11831. PTHR11831. 1 hit.
PfamiPF00163. Ribosomal_S4. 1 hit.
PF01479. S4. 1 hit.
[Graphical view]
SMARTiSM00363. S4. 1 hit.
[Graphical view]
TIGRFAMsiTIGR01018. rpsD_arch. 1 hit.
PROSITEiPS00632. RIBOSOMAL_S4. 1 hit.
PS50889. S4. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

E6PBS7-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MGKTYINTSK TYSTPRRPYE KERLDNEMKL IGTFGLKNKR EVWRVQMILA
60 70 80 90 100
KFRKAARELL TLDPKDPRRL FEGSALLRRM FKYGLLSEQE RKLDYVLGLT
110 120 130 140 150
IHKLMERRLQ TRVFKLNLAN SIHHSRVLIR QRHIKVGKNL VNVPSFMVRT
160 170 180
DSEKSIDFAS TSPLGGGREG RTKRKNAKKS A
Length:181
Mass (Da):21,145
Last modified:March 8, 2011 - v1
Checksum:i80418D3C0B6A4F37
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BK007916 mRNA. Translation: DAA33973.1.
RefSeqiXP_001011432.2. XM_001011432.2.
UniGeneiTth.3206.

Genome annotation databases

GeneIDi7843595.
KEGGitet:TTHERM_00434070.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BK007916 mRNA. Translation: DAA33973.1.
RefSeqiXP_001011432.2. XM_001011432.2.
UniGeneiTth.3206.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
4BPEX-ray3.70D1-181[»]
4BPNX-ray3.70D1-181[»]
4BPOX-ray3.70D1-181[»]
4BPPX-ray3.70D1-181[»]
ProteinModelPortaliE6PBS7.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi7843595.
KEGGitet:TTHERM_00434070.

Phylogenomic databases

KOiK02997.

Family and domain databases

Gene3Di3.10.290.10. 1 hit.
InterProiIPR022801. Ribosomal_S4/S9.
IPR005710. Ribosomal_S4/S9_euk/arc.
IPR001912. Ribosomal_S4/S9_N.
IPR018079. Ribosomal_S4_CS.
IPR002942. S4_RNA-bd.
[Graphical view]
PANTHERiPTHR11831. PTHR11831. 1 hit.
PfamiPF00163. Ribosomal_S4. 1 hit.
PF01479. S4. 1 hit.
[Graphical view]
SMARTiSM00363. S4. 1 hit.
[Graphical view]
TIGRFAMsiTIGR01018. rpsD_arch. 1 hit.
PROSITEiPS00632. RIBOSOMAL_S4. 1 hit.
PS50889. S4. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Crystal structure of the eukaryotic 40S ribosomal subunit in complex with initiation factor 1."
    Rabl J., Leibundgut M., Ataide S.F., Haag A., Ban N.
    Science 331:730-736(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
  2. "The crystal structure of the eukaryotic 40S ribosomal subunit in complex with eIF1 and eIF1A."
    Weisser M., Voigts-Hoffmann F., Rabl J., Leibundgut M., Ban N.
    Nat. Struct. Mol. Biol. 20:1015-1017(2013) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (3.70 ANGSTROMS).

Entry informationi

Entry nameiE6PBS7_TETTH
AccessioniPrimary (citable) accession number: E6PBS7
Entry historyi
Integrated into UniProtKB/TrEMBL: March 8, 2011
Last sequence update: March 8, 2011
Last modified: January 7, 2015
This is version 21 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.