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E6PBS3

- E6PBS3_TETTH

UniProt

E6PBS3 - E6PBS3_TETTH

Protein
Submitted name:

40S ribosomal protein rpS5e

Gene
N/A
Organism
Tetrahymena thermophila
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli
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    • History
      Entry version 20 (01 Oct 2014)
      Sequence version 1 (08 Mar 2011)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. RNA binding Source: InterPro
    2. structural constituent of ribosome Source: InterPro

    GO - Biological processi

    1. translation Source: InterPro

    Keywords - Molecular functioni

    Ribonucleoprotein, Ribosomal proteinUniRule annotationImported

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    40S ribosomal protein rpS5eImported
    OrganismiTetrahymena thermophilaImported
    Taxonomic identifieri5911 [NCBI]
    Taxonomic lineageiEukaryotaAlveolataCiliophoraIntramacronucleataOligohymenophoreaHymenostomatidaTetrahymeninaTetrahymenidaeTetrahymena

    Subcellular locationi

    GO - Cellular componenti

    1. small ribosomal subunit Source: InterPro

    Structurei

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    4BPEX-ray3.70G1-200[»]
    4BPNX-ray3.70G1-200[»]
    4BPOX-ray3.70G1-200[»]
    4BPPX-ray3.70G1-200[»]
    ProteinModelPortaliE6PBS3.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ribosomal protein S7P family.UniRule annotation

    Phylogenomic databases

    KOiK02989.

    Family and domain databases

    Gene3Di1.10.455.10. 1 hit.
    InterProiIPR000235. Ribosomal_S5/S7.
    IPR005716. Ribosomal_S5/S7_euk/arc.
    IPR020606. Ribosomal_S7_CS.
    IPR023798. Ribosomal_S7_dom.
    [Graphical view]
    PANTHERiPTHR11205. PTHR11205. 1 hit.
    PfamiPF00177. Ribosomal_S7. 1 hit.
    [Graphical view]
    PIRSFiPIRSF002122. RPS7p_RPS7a_RPS5e_RPS7o. 1 hit.
    SUPFAMiSSF47973. SSF47973. 1 hit.
    TIGRFAMsiTIGR01028. S7_S5_E_A. 1 hit.
    PROSITEiPS00052. RIBOSOMAL_S7. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    E6PBS3-1 [UniParc]FASTAAdd to Basket

    « Hide

    MSVEKGFATQ PKLFGKWNYD EVKIQDPCFQ NYIACTTTKS QVFVPHTAGR    50
    YQVKKFRKTQ CPIVERLIGT LMFHGRNAGK KALCIKVVKN AFEIIHLVTG 100
    RNPLEVFVGA VQNAGPREDS TRIGTAGVVR KQAVDVAPMR RVNLAIYFII 150
    KGCRESAFKS MRSIAETLAD EIINAEKNNT QSSWAIRKKD EIEKVAKGNR 200
    Length:200
    Mass (Da):22,476
    Last modified:March 8, 2011 - v1
    Checksum:i4A83D4E54885C1B1
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BK007912 mRNA. Translation: DAA33969.1.
    RefSeqiXP_001009990.1. XM_001009990.2.
    UniGeneiTth.360.

    Genome annotation databases

    GeneIDi7844409.
    KEGGitet:TTHERM_01386050.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BK007912 mRNA. Translation: DAA33969.1 .
    RefSeqi XP_001009990.1. XM_001009990.2.
    UniGenei Tth.360.

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    4BPE X-ray 3.70 G 1-200 [» ]
    4BPN X-ray 3.70 G 1-200 [» ]
    4BPO X-ray 3.70 G 1-200 [» ]
    4BPP X-ray 3.70 G 1-200 [» ]
    ProteinModelPortali E6PBS3.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 7844409.
    KEGGi tet:TTHERM_01386050.

    Phylogenomic databases

    KOi K02989.

    Family and domain databases

    Gene3Di 1.10.455.10. 1 hit.
    InterProi IPR000235. Ribosomal_S5/S7.
    IPR005716. Ribosomal_S5/S7_euk/arc.
    IPR020606. Ribosomal_S7_CS.
    IPR023798. Ribosomal_S7_dom.
    [Graphical view ]
    PANTHERi PTHR11205. PTHR11205. 1 hit.
    Pfami PF00177. Ribosomal_S7. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF002122. RPS7p_RPS7a_RPS5e_RPS7o. 1 hit.
    SUPFAMi SSF47973. SSF47973. 1 hit.
    TIGRFAMsi TIGR01028. S7_S5_E_A. 1 hit.
    PROSITEi PS00052. RIBOSOMAL_S7. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Crystal structure of the eukaryotic 40S ribosomal subunit in complex with initiation factor 1."
      Rabl J., Leibundgut M., Ataide S.F., Haag A., Ban N.
      Science 331:730-736(2011) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
    2. "The crystal structure of the eukaryotic 40S ribosomal subunit in complex with eIF1 and eIF1A."
      Weisser M., Voigts-Hoffmann F., Rabl J., Leibundgut M., Ban N.
      Nat. Struct. Mol. Biol. 20:1015-1017(2013) [PubMed] [Europe PMC] [Abstract]
      Cited for: X-RAY CRYSTALLOGRAPHY (3.70 ANGSTROMS).

    Entry informationi

    Entry nameiE6PBS3_TETTH
    AccessioniPrimary (citable) accession number: E6PBS3
    Entry historyi
    Integrated into UniProtKB/TrEMBL: March 8, 2011
    Last sequence update: March 8, 2011
    Last modified: October 1, 2014
    This is version 20 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    3D-structureImported

    External Data

    Dasty 3