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E6PBS2 (E6PBS2_TETTH) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 12. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
OrganismTetrahymena thermophila EMBL DAA33968.1
Taxonomic identifier5911 [NCBI]
Taxonomic lineageEukaryotaAlveolataCiliophoraIntramacronucleataOligohymenophoreaHymenostomatidaTetrahymeninaTetrahymenidaeTetrahymena

Protein attributes

Sequence length260 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

General annotation (Comments)

Miscellaneous

The sequence shown here is derived from an EMBL/GenBank/DDBJ third party annotation (TPA) entry. EMBL DAA33968.1

Ontologies

Keywords
   Molecular functionRibonucleoprotein
Ribosomal protein EMBL DAA33968.1
   Technical term3D-structure PDB 4BPN PDB 4BPO PDB 4BPP
Gene Ontology (GO)
   Biological_processtranslation

Inferred from electronic annotation. Source: InterPro

   Cellular_componentribosome

Inferred from electronic annotation. Source: UniProtKB-KW

   Molecular_functionstructural constituent of ribosome

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
E6PBS2 [UniParc].

Last modified March 8, 2011. Version 1.
Checksum: 50C51F0BFC6B6990

FASTA26029,590
        10         20         30         40         50         60 
MARGPKKHLK RINAPKSWML NKLGGIWATR PSQGPHKLRE SLPLSVLLKE RLNYALNGRD 

        70         80         90        100        110        120 
VTLILNDKEQ NVFVDGKVRR DKGYPTGLMD VVRIEKTDQS FRILYDTKGR FVLKSLSKEE 

       130        140        150        160        170        180 
AKYKLLKVTA KAIGPNQIPY IVTHDSRTIR FPNPEIKIGD TLKYDLVNNK IENFAHLESG 

       190        200        210        220        230        240 
NVCYIQQGNN IGRVGIIQHI EKHQGSFDIC HVKDAKGNAF ATRLGNIFVL GQGKKSWIEL 

       250        260 
PSGDGVRETI LEERKRKFSY 

« Hide

References

[1]"Crystal structure of the eukaryotic 40S ribosomal subunit in complex with initiation factor 1."
Rabl J., Leibundgut M., Ataide S.F., Haag A., Ban N.
Science 0:0-0(2011)
Cited for: NUCLEOTIDE SEQUENCE.
[2]"The crystal structure of the eukaryotic 40S ribosomal subunit in complex with eIF1 and eIF1A."
Weisser M., Voigts-Hoffmann F., Rabl J., Leibundgut M., Ban N.
Nat. Struct. Mol. Biol. 20:1015-1017(2013) [PubMed] [Europe PMC] [Abstract]
Cited for: X-RAY CRYSTALLOGRAPHY (3.70 ANGSTROMS) OF 2-260.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
BK007911 mRNA. Translation: DAA33968.1.

3D structure databases

PDBe
RCSB PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
4BPNX-ray3.70W2-260[»]
4BPOX-ray3.70W2-260[»]
4BPPX-ray3.70W2-260[»]
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Family and domain databases

HAMAPMF_00485. Ribosomal_S4e.
InterProIPR000876. Ribosomal_S4e.
IPR013845. Ribosomal_S4e_central_region.
IPR013843. Ribosomal_S4e_N.
IPR018199. Ribosomal_S4e_N_CS.
[Graphical view]
PANTHERPTHR11581. PTHR11581. 1 hit.
PfamPF00900. Ribosomal_S4e. 1 hit.
PF08071. RS4NT. 1 hit.
[Graphical view]
PIRSFPIRSF002116. Ribosomal_S4. 1 hit.
PROSITEPS00528. RIBOSOMAL_S4E. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameE6PBS2_TETTH
AccessionPrimary (citable) accession number: E6PBS2
Entry history
Integrated into UniProtKB/TrEMBL: March 8, 2011
Last sequence update: March 8, 2011
Last modified: February 19, 2014
This is version 12 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)